Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv43246 Davidia involucrata HOM05D005968 ORTHO05D007158 1.2e-70 269.6 129 100.0
Dinv42854 Davidia involucrata HOM05D005968 ORTHO05D007158 5.7e-68 260.8 123 100.0
CSS0021374 Camellia sinensis var. sinensis HOM05D005968 ORTHO05D007158 2.9e-64 248.4 123 94.3
Hma1.2p1_0222F.1_g093590 Hydrangea macrophylla HOM05D005968 ORTHO05D007158 2.9e-64 248.4 126 92.9
Manes.14G143600 Manihot esculenta HOM05D005968 ORTHO05D007158 3.2e-63 245.0 124 91.9
Dinv41378 Davidia involucrata HOM05D005968 ORTHO05D007158 4.2e-63 244.6 122 94.3
MD15G1144700 Malus domestica HOM05D005968 ORTHO05D007158 4.2e-63 244.6 125 90.4
Prupe.7G263000 Prunus persica HOM05D005968 ORTHO05D007158 2.7e-62 241.9 123 92.7
Psat0s2403g0360 Pisum sativum HOM05D005968 ORTHO05D007158 4.6e-62 241.1 128 85.2
Cc06_g14960 Coffea canephora HOM05D005968 ORTHO05D007158 1.8e-61 239.2 126 88.9
MD02G1007400 Malus domestica HOM05D005968 ORTHO05D007158 1.8e-61 239.2 125 88.0
TPR.G24874 Trifolium pratense HOM05D005968 ORTHO05D007158 3.0e-61 238.4 125 87.2
Sopen07g001730 Solanum pennellii HOM05D005968 ORTHO05D007158 5.1e-61 237.7 126 88.9
Thecc.09G030600 Theobroma cacao HOM05D005968 ORTHO05D007158 6.7e-61 237.3 124 88.7
CiPaw.15G168400 Carya illinoinensis HOM05D005968 ORTHO05D007158 1.1e-60 236.5 124 88.7
Lalb_Chr12g0198701 Lupinus albus HOM05D005968 ORTHO05D007158 1.1e-60 236.5 125 87.2
Medtr4g130840 Medicago truncatula HOM05D005968 ORTHO05D007158 1.1e-60 236.5 127 85.0
Solyc07g005620.2 Solanum lycopersicum HOM05D005968 ORTHO05D007158 1.1e-60 236.5 126 88.1
Duzib187G1838 Durio zibethinus HOM05D005968 ORTHO05D007158 1.5e-60 236.1 122 89.3
Glyma.17G073700 Glycine max HOM05D005968 ORTHO05D007158 2.6e-60 235.3 124 87.1
Glyma.02G204100 Glycine max HOM05D005968 ORTHO05D007158 3.3e-60 235.0 124 86.3
GSVIVG01023605001 Vitis vinifera HOM05D005968 ORTHO05D007158 3.3e-60 235.0 126 87.3
Atru.chr7.47_Atru.chr7.48 Acer truncatum HOM05D005968 ORTHO05D007158 7.4e-60 233.8 122 90.2
Gohir.D08G273400 Gossypium hirsutum HOM05D005968 ORTHO05D007158 7.4e-60 233.8 124 88.7
Gorai.004G291800 Gossypium raimondii HOM05D005968 ORTHO05D007158 9.7e-60 233.4 122 90.2
DCAR_019393 Daucus carota HOM05D005968 ORTHO05D007158 1.7e-59 232.6 122 89.3
Potri.018G106700 Populus trichocarpa HOM05D005968 ORTHO05D007158 1.7e-59 232.6 124 86.3
Lj4g0027447 Lotus japonicus HOM05D005968 ORTHO05D007158 2.2e-59 232.3 122 87.7
PGSC0003DMG400011184 Solanum tuberosum HOM05D005968 ORTHO05D007158 2.2e-59 232.3 122 89.3
Potri.006G184300 Populus trichocarpa HOM05D005968 ORTHO05D007158 2.8e-59 231.9 124 86.3
TAR626G1902 Trochodendron aralioides HOM05D005968 ORTHO05D007158 3.7e-59 231.5 120 89.2
Gohir.A08G251800 Gossypium hirsutum HOM05D005968 ORTHO05D007158 4.8e-59 231.1 124 87.9
Nn8g39893 Nelumbo nucifera HOM05D005968 ORTHO05D007158 1.8e-58 229.2 122 88.5
PGR102G1528 Punica granatum HOM05D005968 ORTHO05D007158 1.8e-58 229.2 122 89.3
HanXRQChr09g0245781 Helianthus annuus HOM05D005968 ORTHO05D007158 3.1e-58 228.4 126 84.9
Nn2g12378 Nelumbo nucifera HOM05D005968 ORTHO05D007158 3.1e-58 228.4 123 87.0
PSO561G0082 Papaver somniferum HOM05D005968 ORTHO05D007158 4.1e-58 228.0 122 86.1
Ciclev10008980m.g Citrus clementina HOM05D005968 ORTHO05D007158 5.3e-58 227.6 122 86.9
Eucgr.C02493 Eucalyptus grandis HOM05D005968 ORTHO05D007158 5.3e-58 227.6 122 85.2
FAN26G1763 Fragaria x ananassa HOM05D005968 ORTHO05D007158 5.3e-58 227.6 125 85.6
RcHm_v2.0_Chr2g0085621 Rosa chinensis HOM05D005968 ORTHO05D007158 5.3e-58 227.6 125 85.6
PSO111G0029 Papaver somniferum HOM05D005968 ORTHO05D007158 6.9e-58 227.3 122 86.1
Oeu038141.1 Olea europaea HOM05D005968 ORTHO05D007158 9.1e-58 226.9 126 83.3
FvH4_1g00920 Fragaria vesca HOM05D005968 ORTHO05D007158 1.2e-57 226.5 123 87.8
CiPaw.16G111000 Carya illinoinensis HOM05D005968 ORTHO05D007158 1.5e-57 226.1 118 88.1
FAN23G3092 Fragaria x ananassa HOM05D005968 ORTHO05D007158 2.6e-57 225.3 122 87.7
Migut.K00326 Erythranthe guttata HOM05D005968 ORTHO05D007158 7.7e-57 223.8 124 83.1
Lj7A459G65 Lonicera japonica HOM05D005968 ORTHO05D007158 7.7e-57 223.8 126 84.9
CANSAT11G2689 Cannabis sativa HOM05D005968 ORTHO05D007158 1.0e-56 223.4 122 83.6
Sp7g28770 Schrenkiella parvula HOM05D005968 ORTHO05D007158 1.3e-56 223.0 122 82.8
ECA236G4418 Erigeron canadensis HOM05D005968 ORTHO05D007158 1.7e-56 222.6 122 84.4
Sed0018428 Sechium edule HOM05D005968 ORTHO05D007158 2.9e-56 221.9 122 85.2
arahy.Tifrunner.gnm1.ann1.D6JQQQ Arachis hypogaea HOM05D005968 ORTHO05D007158 3.8e-56 221.5 125 82.4
DCAR_017911 Daucus carota HOM05D005968 ORTHO05D007158 5.0e-56 221.1 128 78.1
Thhalv10025727m.g Eutrema salsugineum HOM05D005968 ORTHO05D007158 6.5e-56 220.7 122 82.0
Peaxi162Scf00401g00718 Petunia axillaris HOM05D005968 ORTHO05D007158 3.2e-55 218.4 116 88.8
CARHR238800 Cardamine hirsuta HOM05D005968 ORTHO05D007158 4.2e-55 218.0 121 81.8
ClCG06G012410 Citrullus lanatus HOM05D005968 ORTHO05D007158 4.2e-55 218.0 125 82.4
MELO3C010224.2 Cucumis melo HOM05D005968 ORTHO05D007158 4.2e-55 218.0 125 82.4
Carub.0007s0964 Capsella rubella HOM05D005968 ORTHO05D007158 9.4e-55 216.9 122 80.3
THA.LOC104803560 Tarenaya hassleriana HOM05D005968 ORTHO05D007158 9.4e-55 216.9 122 82.0
AL7G21190 Arabidopsis lyrata HOM05D005968 ORTHO05D007158 1.2e-54 216.5 122 80.3
SalBow1G6433 Salvia bowleyana HOM05D005968 ORTHO05D007158 2.1e-54 215.7 114 87.7
VMungo1215G2113 Vigna mungo HOM05D005968 ORTHO05D007158 2.7e-54 215.3 116 84.5
C01p08040 Brassica napus HOM05D005968 ORTHO05D007158 7.9e-54 213.8 117 84.6
QL02p093270 Quercus lobata HOM05D005968 ORTHO05D007158 7.9e-54 213.8 122 82.8
Aqoxy2G01962_Aqoxy2G01963 Aquilegia oxysepala HOM05D005968 ORTHO05D007158 1.0e-53 213.4 126 80.2
BolC1t00793H Brassica oleracea HOM05D005968 ORTHO05D007158 1.4e-53 213.0 117 84.6
Cfa020826 Carpinus fangiana HOM05D002374 ORTHO05D003594 1.8e-53 212.6 107 87.9
HPP92_004698 Vanilla planifolia HOM05D005968 ORTHO05D007158 1.8e-53 212.6 127 81.9
BcaC09g51877 Brassica carinata HOM05D005968 ORTHO05D007158 3.0e-53 211.8 117 83.8
A01p07280 Brassica napus HOM05D005968 ORTHO05D007158 3.0e-53 211.8 117 83.8
BraA01t00677Z Brassica rapa HOM05D005968 ORTHO05D007158 3.0e-53 211.8 117 83.8
AT4G30900 Arabidopsis thaliana HOM05D005968 ORTHO05D007158 1.1e-52 209.9 122 78.7
EL10Ac8g18668 Beta vulgaris HOM05D005968 ORTHO05D007158 2.0e-52 209.1 122 80.3
Cpa.g.sc46.156 Carica papaya HOM05D005968 ORTHO05D007158 4.4e-52 208.0 147 70.7
Lsat_1_v5_gn_8_63401 Lactuca sativa HOM05D005968 ORTHO05D007158 5.7e-52 207.6 117 82.9
BcaNung03430 Brassica carinata HOM05D005968 ORTHO05D007158 9.7e-52 206.8 122 77.9
Sabra18G0090900 Salix brachista HOM05D005968 ORTHO05D007158 2.2e-51 205.7 170 61.8
Os05g0279600 Oryza sativa ssp. japonica HOM05D005968 ORTHO05D007158 2.8e-51 205.3 126 74.6
Zm00001eb086780 Zea mays HOM05D005968 ORTHO05D007158 2.8e-51 205.3 124 75.8
Zm00001eb420110 Zea mays HOM05D005968 ORTHO05D007158 3.7e-51 204.9 122 77.0
Aa31LG2G19470 Aethionema arabicum HOM05D005968 ORTHO05D007158 4.8e-51 204.5 117 80.3
Ca_21128_v3 Cicer arietinum L. HOM05D005968 ORTHO05D007158 6.3e-51 204.1 125 76.8
Sabra06G0140100 Salix brachista HOM05D005968 ORTHO05D007158 4.1e-50 201.4 200 54.5
CiPaw.15G168700 Carya illinoinensis HOM05D005968 ORTHO05D007158 5.9e-49 197.6 117 80.3
SEGI_19747 Sequoiadendron giganteum HOM05D005968 ORTHO05D007158 1.7e-43 179.5 126 65.9
Mapoly0088s0077 Marchantia polymorpha HOM05D005968 ORTHO05D007158 6.3e-43 177.6 122 64.8
TWI34G0179 Tripterygium wilfordii HOM05D005968 ORTHO05D007158 2.5e-39 165.6 90 86.7
COL.COLO4_18810 Corchorus olitorius HOM05D000238 ORTHO05D007158 2.1e-38 162.5 87 86.2
Phvul.003G156000 Phaseolus vulgaris HOM05D005968 ORTHO05D007158 4.0e-37 158.3 91 79.1
AagrBONN_evm.TU.Sc2ySwM_362.192 Anthoceros agrestis HOM05D005968 ORTHO05D007158 1.5e-36 156.4 111 60.4
ATR0739G020 Amborella trichopoda HOM05D005968 ORTHO05D007158 2.6e-36 155.6 89 79.8
CsaV3_1G028970 Cucumis sativus L. HOM05D005968 ORTHO05D007158 2.6e-36 155.6 90 80.0
CDE04G1812 Ceratophyllum demersum HOM05D005968 ORTHO05D007158 3.5e-33 145.2 89 71.9
Actinidia38673 Actinidia chinensis HOM05D005968 ORTHO05D007158 4.5e-33 144.8 82 80.5
unitig_52.g17565 Utricularia gibba HOM05D005968 ORTHO05D007158 1.1e-31 140.2 113 61.9
Lsat_1_v5_gn_4_18741 Lactuca sativa HOM05D005968 ORTHO05D007158 2.5e-31 139.0 82 78.0
TAR636G0142 Trochodendron aralioides HOM05D002374 ORTHO05D003594 3.0e-29 132.1 71 83.1
AUR62029822 Chenopodium quinoa HOM05D005968 ORTHO05D007158 3.7e-27 125.2 67 82.1
Eucgr.C02541 Eucalyptus grandis HOM05D005968 ORTHO05D007158 3.3e-23 112.1 71 77.5
AUR62006466 Chenopodium quinoa HOM05D005968 ORTHO05D007158 8.9e-21 104.0 60 75.0
Lsat_1_v5_gn_7_66900 Lactuca sativa HOM05D005968 ORTHO05D007158 1.2e-17 93.6 81 59.3
Nitab4.5_0003623g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 2.0e-17 92.8 51 84.3
SGA_v2.0_scaffold347G49545 Striga asiatica HOM05D005968 ORTHO05D007158 1.7e-16 89.7 48 85.4
arahy.Tifrunner.gnm1.ann1.QXT71M Arachis hypogaea HOM05D005968 ORTHO05D007158 9.5e-15 84.0 46 84.8
arahy.Tifrunner.gnm1.ann1.4WLG0J Arachis hypogaea HOM05D005968 ORTHO05D007158 8.0e-14 80.9 62 64.5
arahy.Tifrunner.gnm1.ann1.VCSM30 Arachis hypogaea HOM05D005968 ORTHO05D007158 4.0e-13 78.6 47 78.7
Haze_19213 Corylus avellana HOM05D000344 ORTHO05D005296 5.8e-12 74.7 34 91.2
arahy.Tifrunner.gnm1.ann1.HGKJ8P Arachis hypogaea HOM05D005968 ORTHO05D007158 2.4e-10 69.3 40 80.0
Oeu038782.2 Olea europaea HOM05D005968 ORTHO05D007158 7.0e-10 67.8 56 62.5


User provided reference genes

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