Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv43244 Davidia involucrata HOM05D005809 ORTHO05D007259 1.2e-124 449.9 231 100.0
Dinv41380 Davidia involucrata HOM05D005809 ORTHO05D007259 6.9e-109 397.5 231 89.2
Hma1.2p1_0222F.1_g093550 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 1.7e-94 349.7 231 78.4
CSS0045900 Camellia sinensis var. sinensis HOM05D005809 ORTHO05D007259 2.4e-93 345.9 231 77.1
GSVIVG01023603001 Vitis vinifera HOM05D005809 ORTHO05D007259 5.3e-93 344.7 231 74.9
QL02p093215 Quercus lobata HOM05D005809 ORTHO05D007259 8.5e-91 337.4 232 75.9
CiPaw.15G168900 Carya illinoinensis HOM05D005809 ORTHO05D007259 1.4e-88 330.1 231 72.3
TWI34G1090 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 6.8e-88 327.8 233 71.7
Eucgr.C02542 Eucalyptus grandis HOM05D005809 ORTHO05D007259 2.8e-86 322.4 232 72.4
TAR636G3217 Trochodendron aralioides HOM05D005809 ORTHO05D007259 2.8e-86 322.4 232 73.3
Lalb_Chr23g0275681 Lupinus albus HOM05D005809 ORTHO05D007259 3.7e-86 322.0 232 71.6
Prupe.7G262800 Prunus persica HOM05D005809 ORTHO05D007259 4.8e-86 321.6 231 71.4
Dinv42856 Davidia involucrata HOM05D005809 ORTHO05D007259 6.3e-86 321.2 164 100.0
Nn8g39891 Nelumbo nucifera HOM05D005809 ORTHO05D007259 4.1e-85 318.5 232 71.1
Ciclev10009378m.g Citrus clementina HOM05D005809 ORTHO05D007259 7.0e-85 317.8 231 69.7
Eucgr.C02492 Eucalyptus grandis HOM05D005809 ORTHO05D007259 1.2e-84 317.0 232 71.6
Lj6g0016819 Lotus japonicus HOM05D005809 ORTHO05D007259 2.0e-84 316.2 231 70.1
MD02G1007700 Malus domestica HOM05D005809 ORTHO05D007259 2.7e-84 315.8 231 70.6
Thecc.09G030800 Theobroma cacao HOM05D005809 ORTHO05D007259 4.5e-84 315.1 231 69.3
CANSAT11G2656 Cannabis sativa HOM05D005809 ORTHO05D007259 1.7e-83 313.2 232 69.8
Gohir.D05G056000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 1.7e-83 313.2 231 70.1
Gorai.009G057000 Gossypium raimondii HOM05D005809 ORTHO05D007259 6.5e-83 311.2 231 69.7
TWI32G0918 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 1.1e-82 310.5 226 70.8
MELO3C004136.2 Cucumis melo HOM05D005809 ORTHO05D007259 2.5e-82 309.3 231 67.5
Duzib187G1947 Durio zibethinus HOM05D005809 ORTHO05D007259 9.5e-82 307.4 231 69.7
CsaV3_2G007490 Cucumis sativus L. HOM05D005809 ORTHO05D007259 1.2e-81 307.0 231 67.1
Atru.chr7.51 Acer truncatum HOM05D005809 ORTHO05D007259 2.8e-81 305.8 227 68.3
COL.COLO4_18808 Corchorus olitorius HOM05D005809 ORTHO05D007259 1.0e-80 303.9 231 65.4
Migut.J01341 Erythranthe guttata HOM05D005809 ORTHO05D007259 1.4e-80 303.5 231 67.5
MSTRG.19648 Avicennia marina HOM05D005809 ORTHO05D007259 2.3e-80 302.8 231 67.5
Ca_03733_v3 Cicer arietinum L. HOM05D005809 ORTHO05D007259 3.0e-80 302.4 233 67.8
Glyma.06G219200 Glycine max HOM05D005809 ORTHO05D007259 6.8e-80 301.2 225 70.2
Sed0001225 Sechium edule HOM05D005809 ORTHO05D007259 6.8e-80 301.2 231 64.9
Solyc07g005640.3 Solanum lycopersicum HOM05D005809 ORTHO05D007259 1.5e-79 300.1 231 67.5
PGSC0003DMG401011139 Solanum tuberosum HOM05D005809 ORTHO05D007259 2.0e-79 299.7 232 68.1
Sopen07g001740 Solanum pennellii HOM05D005809 ORTHO05D007259 3.4e-79 298.9 231 66.7
RcHm_v2.0_Chr2g0085671 Rosa chinensis HOM05D005809 ORTHO05D007259 9.8e-79 297.4 231 68.4
Phvul.009G195100 Phaseolus vulgaris HOM05D005809 ORTHO05D007259 1.7e-78 296.6 231 67.1
TPR.G20735 Trifolium pratense HOM05D005809 ORTHO05D007259 2.2e-78 296.2 233 67.8
FAN23G2666 Fragaria x ananassa HOM05D005809 ORTHO05D007259 3.7e-78 295.4 231 68.4
arahy.Tifrunner.gnm1.ann1.46B1EJ Arachis hypogaea HOM05D005809 ORTHO05D007259 1.1e-77 293.9 225 68.0
PGR102G1797 Punica granatum HOM05D005809 ORTHO05D007259 1.2e-76 290.4 231 66.2
arahy.Tifrunner.gnm1.ann1.Z5GGTZ Arachis hypogaea HOM05D005809 ORTHO05D007259 1.6e-76 290.0 225 67.1
Oeu052197.1 Olea europaea HOM05D005809 ORTHO05D007259 1.6e-76 290.0 232 66.4
Potri.006G184600 Populus trichocarpa HOM05D005809 ORTHO05D007259 2.7e-76 289.3 233 66.5
HanXRQChr17g0552351 Helianthus annuus HOM05D005809 ORTHO05D007259 3.5e-76 288.9 231 68.8
Glyma.06G219400 Glycine max HOM05D005809 ORTHO05D007259 4.5e-76 288.5 231 65.8
AL8G34030 Arabidopsis lyrata HOM05D005809 ORTHO05D007259 5.9e-76 288.1 236 63.1
vmacro16802 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 5.9e-76 288.1 281 58.7
ECA247G0266 Erigeron canadensis HOM05D005809 ORTHO05D007259 7.8e-76 287.7 232 67.7
Rhsim01G0033400 Rhododendron simsii HOM05D005809 ORTHO05D007259 1.0e-75 287.3 224 67.4
Sp6g19620 Schrenkiella parvula HOM05D005809 ORTHO05D007259 1.0e-75 287.3 236 63.1
Sc08g0005640 Simmondsia chinensis HOM05D005809 ORTHO05D007259 1.7e-75 286.6 231 65.8
Medtr2g460780 Medicago truncatula HOM05D005809 ORTHO05D007259 2.3e-75 286.2 232 65.1
Carub.0008s1848 Capsella rubella HOM05D005809 ORTHO05D007259 2.9e-75 285.8 231 63.6
CARHR271730 Cardamine hirsuta HOM05D005809 ORTHO05D007259 2.9e-75 285.8 232 64.2
BraA10t43609Z Brassica rapa HOM05D005809 ORTHO05D007259 5.0e-75 285.0 231 63.6
Sabra06G0140200 Salix brachista HOM05D005809 ORTHO05D007259 8.6e-75 284.3 227 66.5
AT5G57950 Arabidopsis thaliana HOM05D005809 ORTHO05D007259 1.1e-74 283.9 231 63.6
Actinidia04301 Actinidia chinensis HOM05D005809 ORTHO05D007259 4.3e-74 282.0 231 66.2
FvH4_1g00940 Fragaria vesca HOM05D005809 ORTHO05D007259 9.5e-74 280.8 224 67.0
Manes.06G033951 Manihot esculenta HOM05D005809 ORTHO05D007259 1.2e-73 280.4 233 64.8
SalBow1G5910 Salvia bowleyana HOM05D005809 ORTHO05D007259 1.6e-73 280.0 224 66.1
Aqoxy2G02328 Aquilegia oxysepala HOM05D005809 ORTHO05D007259 2.1e-73 279.6 231 64.1
A10p16200 Brassica napus HOM05D005809 ORTHO05D007259 6.1e-73 278.1 231 63.2
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 1.0e-72 277.3 231 61.5
Duzib168G0271 Durio zibethinus HOM05D005809 ORTHO05D007259 1.8e-72 276.6 224 67.0
THA.LOC104817821 Tarenaya hassleriana HOM05D005809 ORTHO05D007259 1.8e-72 276.6 232 62.5
Aa31LG3G13770 Aethionema arabicum HOM05D000853 ORTHO05D000723 2.6e-71 272.7 225 61.8
Ah.02g128190 Amaranthus hybridus HOM05D005809 ORTHO05D007259 2.6e-71 272.7 231 63.2
Psat1g021800 Pisum sativum HOM05D005809 ORTHO05D007259 2.6e-71 272.7 231 61.9
CAN.G160.58 Capsicum annuum HOM05D005809 ORTHO05D007259 1.3e-70 270.4 235 62.1
Lsat_1_v5_gn_8_63301 Lactuca sativa HOM05D005809 ORTHO05D007259 2.9e-70 269.2 243 61.7
BolC9t57830H Brassica oleracea HOM05D005809 ORTHO05D007259 4.9e-70 268.5 231 60.2
Cpa.g.sc46.154 Carica papaya HOM05D005809 ORTHO05D007259 6.4e-70 268.1 224 64.3
Haze_19206 Corylus avellana HOM05D005809 ORTHO05D007259 1.1e-69 267.3 226 63.7
ClCG02G014530 Citrullus lanatus HOM05D005809 ORTHO05D007259 1.4e-69 266.9 212 65.1
Thhalv10014592m.g Eutrema salsugineum HOM05D005809 ORTHO05D007259 3.2e-69 265.8 224 61.6
C09p49790 Brassica napus HOM05D005809 ORTHO05D007259 4.1e-69 265.4 231 59.7
Gohir.A05G055000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 1.2e-68 263.8 236 62.3
PSO782G1751 Papaver somniferum HOM05D005809 ORTHO05D007259 6.0e-68 261.5 231 60.2
PSO063G2086 Papaver somniferum HOM05D005809 ORTHO05D007259 2.3e-67 259.6 231 59.7
Peaxi162Scf00401g00082 Petunia axillaris HOM05D005809 ORTHO05D007259 1.5e-66 256.9 217 62.2
Nitab4.5_0001571g0010 Nicotiana tabacum HOM05D005809 ORTHO05D007259 5.6e-66 255.0 238 59.7
DCAR_017909 Daucus carota HOM05D005809 ORTHO05D007259 1.2e-65 253.8 253 58.5
Nitab4.5_0005653g0040 Nicotiana tabacum HOM05D005809 ORTHO05D007259 4.0e-64 248.8 230 59.1
Zm00001eb312980 Zea mays HOM05D005809 ORTHO05D007259 1.5e-63 246.9 233 56.7
ATR0739G206 Amborella trichopoda HOM05D005809 ORTHO05D007259 1.3e-62 243.8 234 58.5
SGA_v2.0_scaffold265G46107 Striga asiatica HOM05D005809 ORTHO05D007259 3.7e-62 242.3 224 57.6
HPP92_016019 Vanilla planifolia HOM05D005809 ORTHO05D007259 3.7e-62 242.3 235 54.9
Os09g0420600 Oryza sativa ssp. japonica HOM05D005809 ORTHO05D007259 3.2e-61 239.2 231 55.8
SEGI_31268 Sequoiadendron giganteum HOM05D005809 ORTHO05D007259 4.6e-60 235.3 235 55.3
vmacro05441 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 1.1e-58 230.7 206 60.2
Actinidia38322 Actinidia chinensis HOM05D005809 ORTHO05D007259 1.9e-58 229.9 166 73.5
Lj9C717G7 Lonicera japonica HOM05D005809 ORTHO05D007259 2.5e-58 229.6 224 58.5
CDE12G0564 Ceratophyllum demersum HOM05D005809 ORTHO05D007259 2.3e-56 223.0 257 49.8
HPP92_016035 Vanilla planifolia HOM05D005809 ORTHO05D007259 2.3e-56 223.0 216 55.1
Hma1.2p1_0010F.1_g006710 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 2.0e-55 219.9 164 71.3
FAN28G0834 Fragaria x ananassa HOM05D005809 ORTHO05D007259 7.5e-55 218.0 232 55.2
AagrBONN_evm.TU.Sc2ySwM_117.3948 Anthoceros agrestis HOM05D005809 ORTHO05D007259 3.7e-54 215.7 233 49.8
Hund01517 Selenicereus undatus HOM05D005809 ORTHO05D007259 3.7e-54 215.7 224 54.0
AUR62035200 Chenopodium quinoa HOM05D005809 ORTHO05D007259 1.1e-53 214.2 231 53.2
Pp3c8_2960 Physcomitrium patens HOM05D005809 ORTHO05D007259 1.9e-53 213.4 235 48.9
SMO361G0343 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 2.1e-52 209.9 232 49.1
Mapoly0003s0072 Marchantia polymorpha HOM05D005809 ORTHO05D007259 4.6e-52 208.8 236 48.3
SMO361G0248 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 6.6e-51 204.9 227 50.2
Pp3c16_13530 Physcomitrium patens HOM05D005809 ORTHO05D007259 1.2e-49 200.7 223 47.1
SHI02853 Sapria himalayana HOM05D005809 ORTHO05D007259 7.1e-45 184.9 218 47.7
Sed0002126 Sechium edule HOM05D005809 ORTHO05D007259 1.2e-44 184.1 162 60.5
CBR_g38078 Chara braunii HOM05D000019 ORTHO05D000048 3.6e-33 146.0 262 35.1
Cc06_g14990 Coffea canephora HOM05D005809 ORTHO05D007259 1.8e-32 143.7 102 69.6
Cc06_g14980 Coffea canephora HOM05D005809 ORTHO05D007259 5.3e-32 142.1 104 69.2
RcHm_v2.0_Chr5g0031291 Rosa chinensis HOM05D005809 ORTHO05D007259 2.6e-31 139.8 145 55.9
FAN21G3780 Fragaria x ananassa HOM05D005809 ORTHO05D007259 9.9e-31 137.9 194 44.8
Aa31LG1G19310 Aethionema arabicum HOM05D005809 ORTHO05D007259 9.3e-29 131.3 93 65.6
EL10As1g23143 Beta vulgaris HOM05D005809 ORTHO05D007259 2.1e-28 130.2 105 64.8
FAN25G0559 Fragaria x ananassa HOM05D005809 ORTHO05D007259 2.7e-28 129.8 121 57.9
MCO13G469 Micromonas commoda HOM05D005809 ORTHO05D007259 2.7e-28 129.8 224 35.7
Cre04.g226950 Chlamydomonas reinhardtii HOM05D005809 ORTHO05D007259 1.5e-23 114.0 274 29.6
Hma1.2p1_0222F.1_g093570 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 6.4e-22 108.6 73 78.1
FvH4_3g18530 Fragaria vesca HOM05D005809 ORTHO05D007259 1.0e-19 101.3 168 39.9
FAN11G2737 Fragaria x ananassa HOM05D005809 ORTHO05D007259 1.0e-19 101.3 168 39.9
CSS0015204 Camellia sinensis var. sinensis HOM05D000853 ORTHO05D000723 3.9e-19 99.4 75 73.3
PRCOL_00000214 Prasinoderma coloniale HOM05D005809 ORTHO05D007259 8.7e-19 98.2 201 33.8
EL10As1g23140 Beta vulgaris HOM05D005809 ORTHO05D007259 2.5e-18 96.7 63 74.6
Oeu007777.1 Olea europaea HOM05D005809 ORTHO05D007259 1.3e-17 94.4 89 52.8
MD09G1175000 Malus domestica HOM05D005809 ORTHO05D007259 2.8e-17 93.2 92 59.8
Oeu049715.1 Olea europaea HOM05D005809 ORTHO05D007259 2.8e-17 93.2 91 51.6
Oeu038698.1 Olea europaea HOM05D005809 ORTHO05D007259 3.7e-17 92.8 89 51.7
Oeu017561.1 Olea europaea HOM05D005809 ORTHO05D007259 9.0e-16 88.2 89 49.4
FAN26G2229 Fragaria x ananassa HOM05D005809 ORTHO05D007259 2.6e-15 86.7 74 60.8
vmacro11582 Vaccinium macrocarpon HOM05D005809 ORTHO05D010075 8.4e-14 81.6 56 73.2
Oeu029241.1 Olea europaea HOM05D005809 ORTHO05D007259 1.8e-11 73.9 77 45.5
Sc08g0005650 Simmondsia chinensis HOM05D005809 ORTHO05D007259 7.7e-07 58.5 63 52.4


User provided reference genes

Program Settings