Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42917 Davidia involucrata HOM05D006568 ORTHO05D008342 2.5e-279 964.9 519 100.0
Dinv43183 Davidia involucrata HOM05D006568 ORTHO05D008342 2.5e-279 964.9 519 100.0
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 1.6e-198 696.4 606 64.2
Dinv22137 Davidia involucrata HOM05D006568 ORTHO05D008342 1.6e-193 679.9 384 100.0
GSVIVG01012889001 Vitis vinifera HOM05D006568 ORTHO05D008342 1.3e-176 623.6 565 62.8
Rhsim03G0254700 Rhododendron simsii HOM05D006568 ORTHO05D008342 8.7e-176 620.9 670 55.7
Hma1.2p1_0182F.1_g080440 Hydrangea macrophylla HOM05D006568 ORTHO05D008342 3.8e-171 605.5 642 56.7
vmacro06105 Vaccinium macrocarpon HOM05D006568 ORTHO05D000801 4.3e-167 592.0 600 57.8
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 6.2e-166 588.2 586 58.7
Atru.chr7.233 Acer truncatum HOM05D006568 ORTHO05D008342 1.4e-165 587.0 600 57.2
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 1.5e-164 583.6 600 57.5
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 2.9e-163 579.3 595 57.5
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 4.9e-163 578.6 586 57.0
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 6.5e-163 578.2 600 57.0
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 1.1e-162 577.4 606 55.9
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 1.2e-161 573.9 595 57.1
Ciclev10007895m.g Citrus clementina HOM05D006568 ORTHO05D008342 3.5e-161 572.4 599 57.1
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 4.3e-159 565.5 595 57.1
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 5.7e-159 565.1 594 55.7
Oeu028734.1 Olea europaea HOM05D006568 ORTHO05D008342 3.4e-156 555.8 542 60.1
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 4.5e-156 555.4 597 56.1
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 1.0e-155 554.3 573 57.4
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 2.2e-155 553.1 571 56.9
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 5.0e-155 552.0 564 57.4
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 6.5e-155 551.6 573 56.7
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 4.2e-154 548.9 574 56.8
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 4.2e-154 548.9 572 56.6
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 2.3e-152 543.1 583 55.4
Gohir.A06G050300 Gossypium hirsutum HOM05D006568 ORTHO05D008342 2.3e-152 543.1 573 54.8
Gorai.010G056500 Gossypium raimondii HOM05D006568 ORTHO05D008342 3.9e-152 542.3 573 54.8
Gohir.D06G049600 Gossypium hirsutum HOM05D006568 ORTHO05D008342 1.9e-151 540.0 573 54.6
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 5.7e-151 538.5 597 53.3
Peaxi162Scf00391g00111 Petunia axillaris HOM05D006568 ORTHO05D008342 7.4e-151 538.1 574 54.9
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 2.4e-149 533.1 542 57.9
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 3.1e-149 532.7 590 53.1
Nitab4.5_0001021g0090 Nicotiana tabacum HOM05D006568 ORTHO05D008342 5.3e-149 531.9 569 55.4
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 1.0e-147 527.7 588 55.6
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 1.7e-147 526.9 590 53.4
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 2.9e-147 526.2 591 54.0
MD15G1160100 Malus domestica HOM05D006568 ORTHO05D008342 7.2e-146 521.5 591 53.5
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 1.2e-145 520.8 589 53.3
CAN.G518.23 Capsicum annuum HOM05D006568 ORTHO05D008342 3.6e-145 519.2 561 54.5
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 3.6e-145 519.2 571 54.5
DCAR_008870 Daucus carota HOM05D006568 ORTHO05D008342 1.8e-144 516.9 535 55.7
Nitab4.5_0001555g0100 Nicotiana tabacum HOM05D006568 ORTHO05D008342 2.3e-144 516.5 570 53.9
PGSC0003DMG400030734 Solanum tuberosum HOM05D006568 ORTHO05D008342 3.9e-144 515.8 559 52.8
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 2.0e-143 513.5 566 54.1
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 1.3e-142 510.8 515 56.9
Solyc07g007190.3 Solanum lycopersicum HOM05D006568 ORTHO05D008342 1.3e-142 510.8 550 54.5
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 4.1e-141 505.8 574 53.7
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 2.0e-140 503.4 511 56.6
Sopen07g003240 Solanum pennellii HOM05D006568 ORTHO05D008342 2.0e-140 503.4 553 53.3
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 3.4e-140 502.7 573 53.4
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 4.5e-140 502.3 497 58.6
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 1.4e-138 497.3 505 56.4
Sed0017332 Sechium edule HOM05D006568 ORTHO05D008342 5.5e-138 495.4 561 53.5
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 2.1e-137 493.4 514 55.3
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 6.3e-134 481.9 513 55.0
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 3.1e-133 479.6 523 54.3
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 1.6e-132 477.2 500 55.2
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 6.5e-131 471.9 506 55.5
PGR142G1115 Punica granatum HOM05D006568 ORTHO05D008342 6.5e-131 471.9 529 54.6
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 6.5e-131 471.9 550 52.9
Nn2g12241 Nelumbo nucifera HOM05D006568 ORTHO05D008342 1.1e-130 471.1 514 53.1
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 3.6e-129 466.1 464 58.2
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 2.0e-127 460.3 574 51.6
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 9.7e-127 458.0 474 56.8
arahy.Tifrunner.gnm1.ann1.XD5HYR Arachis hypogaea HOM05D006568 ORTHO05D008342 2.2e-123 446.8 479 54.3
SalBow1G3333 Salvia bowleyana HOM05D006568 ORTHO05D008342 2.9e-123 446.4 465 55.3
MSTRG.26320 Avicennia marina HOM05D006568 ORTHO05D008342 5.5e-122 442.2 515 51.3
Ah.14g078680 Amaranthus hybridus HOM05D006568 ORTHO05D008342 4.7e-121 439.1 509 52.3
HanXRQChr03g0063991 Helianthus annuus HOM05D006568 ORTHO05D008342 1.4e-120 437.6 519 51.8
arahy.Tifrunner.gnm1.ann1.9W3K41 Arachis hypogaea HOM05D006568 ORTHO05D008342 5.2e-120 435.6 494 52.4
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 1.3e-118 431.0 513 50.7
Sed0011467 Sechium edule HOM05D006568 ORTHO05D008342 1.3e-118 431.0 562 48.4
Migut.K00383 Erythranthe guttata HOM05D006568 ORTHO05D008342 3.7e-118 429.5 549 48.5
ECA240G0509 Erigeron canadensis HOM05D006568 ORTHO05D008342 7.7e-116 421.8 518 49.8
MBI15_g47023_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 1.3e-115 421.0 595 45.2
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 2.2e-115 420.2 503 50.9
Nn8g39711 Nelumbo nucifera HOM05D006568 ORTHO05D008342 6.5e-115 418.7 447 53.5
ATR0629G030 Amborella trichopoda HOM05D006568 ORTHO05D008342 1.4e-112 411.0 595 45.2
Oeu040792.1 Olea europaea HOM05D006568 ORTHO05D008342 8.8e-112 408.3 444 54.3
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 7.0e-109 398.7 521 48.8
SHI03244 Sapria himalayana HOM05D006568 ORTHO05D008342 7.0e-109 398.7 456 50.2
MSTRG.6088 Avicennia marina HOM05D006568 ORTHO05D008342 1.5e-106 391.0 488 49.6
Dinv41428 Davidia involucrata HOM05D006568 ORTHO05D008342 1.9e-106 390.6 342 65.2
Lalb_Chr11g0072971 Lupinus albus HOM05D006568 ORTHO05D008342 3.0e-104 383.3 500 49.2
Psat4g033400 Pisum sativum HOM05D006568 ORTHO05D008342 1.4e-93 347.8 402 53.5
HPP92_005342 Vanilla planifolia HOM05D006568 ORTHO05D008342 6.6e-91 339.0 475 45.9
SalBow1G7296 Salvia bowleyana HOM05D006568 ORTHO05D008342 1.2e-89 334.7 561 42.1
Migut.J01268 Erythranthe guttata HOM05D006568 ORTHO05D008342 1.4e-88 331.3 555 42.7
Lj6g0005589 Lotus japonicus HOM05D006568 ORTHO05D008342 3.7e-86 323.2 500 46.0
Lsat_1_v5_gn_7_47940 Lactuca sativa HOM05D006568 ORTHO05D008342 4.9e-86 322.8 489 43.4
Glyma.15G201700 Glycine max HOM05D006568 ORTHO05D008342 2.1e-84 317.4 510 43.9
Actinidia26349 Actinidia chinensis HOM05D006568 ORTHO05D008342 1.2e-81 308.1 318 59.4
Actinidia38697 Actinidia chinensis HOM05D006568 ORTHO05D008342 2.8e-81 307.0 235 72.8
Phvul.009G209900 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 3.0e-75 287.0 511 39.5
TAR636G2103 Trochodendron aralioides HOM05D006568 ORTHO05D008342 6.6e-75 285.8 281 57.7
Os09g0556800 Oryza sativa ssp. japonica HOM05D006568 ORTHO05D008342 1.9e-74 284.3 548 39.2
Dinv22138 Davidia involucrata HOM05D006568 ORTHO05D008342 2.5e-74 283.9 133 100.0
SEGI_41462 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 7.3e-74 282.3 648 34.3
Zm00001eb320530 Zea mays HOM05D006568 ORTHO05D008342 2.1e-73 280.8 544 38.8
SEGI_32321 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 6.4e-70 269.2 558 36.2
SGA_v2.0_scaffold229G43344 Striga asiatica HOM05D006568 ORTHO05D008342 2.4e-69 267.3 522 37.7
MBI15_g45924_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 2.1e-68 264.2 230 63.0
VMungo1309G2996 Vigna mungo HOM05D006568 ORTHO05D008342 8.7e-67 258.8 523 38.6
Actinidia38696 Actinidia chinensis HOM05D006568 ORTHO05D008342 5.3e-64 249.6 208 64.9
PSO782G3486 Papaver somniferum HOM05D006568 ORTHO05D008342 6.9e-56 222.6 237 54.9
AagrBONN_evm.TU.Sc2ySwM_228.5766 Anthoceros agrestis HOM05D006568 ORTHO05D008342 4.6e-52 209.9 622 30.1
SMO172G0216 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 1.1e-42 178.7 568 34.3
Mapoly0083s0072 Marchantia polymorpha HOM05D006568 ORTHO05D008342 4.3e-42 176.8 644 28.9
unitig_27.g25107 Utricularia gibba HOM05D006568 ORTHO05D008342 4.1e-40 170.2 141 66.0
Zm00001eb104550 Zea mays HOM05D006568 ORTHO05D008342 1.8e-35 154.8 383 34.2
TAR636G1038 Trochodendron aralioides HOM05D006568 ORTHO05D008342 1.1e-32 145.6 86 80.2
SMO172G0023 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 1.7e-09 68.6 124 33.1
Oeu060513.1 Olea europaea HOM05D006568 ORTHO05D008342 2.8e-09 67.8 49 61.2
Oeu041156.1 Olea europaea HOM05D006568 ORTHO05D008342 2.2e-06 58.2 75 53.3


User provided reference genes

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