Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv17019 Davidia involucrata HOM05D005444 ORTHO05D006773 1.3e-182 642.9 327 100.0
Dinv42967 Davidia involucrata HOM05D005444 ORTHO05D006773 1.3e-182 642.9 327 100.0
Dinv43132 Davidia involucrata HOM05D005444 ORTHO05D006773 1.3e-182 642.9 327 100.0
Dinv04178 Davidia involucrata HOM05D005444 ORTHO05D006773 2.3e-110 402.9 269 77.7
Actinidia34411 Actinidia chinensis HOM05D005444 ORTHO05D006773 7.5e-101 371.3 272 71.0
CSS0026048 Camellia sinensis var. sinensis HOM05D005444 ORTHO05D006773 2.9e-100 369.4 271 72.3
vmacro14541 Vaccinium macrocarpon HOM05D005444 ORTHO05D006773 7.3e-96 354.8 269 69.5
Rhsim01G0229400 Rhododendron simsii HOM05D005444 ORTHO05D006773 3.6e-95 352.4 270 70.4
Actinidia23933 Actinidia chinensis HOM05D000001 ORTHO05D000003 1.2e-93 347.4 289 64.7
Haze_24114 Corylus avellana HOM05D005444 ORTHO05D006773 8.4e-92 341.3 270 67.4
Cfa011517 Carpinus fangiana HOM05D005444 ORTHO05D006773 9.3e-91 337.8 270 67.0
GSVIVG01024939001 Vitis vinifera HOM05D005444 ORTHO05D006773 5.1e-89 332.0 267 66.7
Cpa.g.sc81.131 Carica papaya HOM05D005444 ORTHO05D006773 8.1e-87 324.7 249 70.3
Ciclev10028946m.g Citrus clementina HOM05D005444 ORTHO05D006773 8.1e-87 324.7 276 64.1
Manes.02G131500 Manihot esculenta HOM05D005444 ORTHO05D006773 8.1e-87 324.7 274 63.9
Lj1A150T42 Lonicera japonica HOM05D005444 ORTHO05D006773 1.4e-86 323.9 269 65.4
TAR633G2200 Trochodendron aralioides HOM05D005444 ORTHO05D006773 1.8e-86 323.6 294 62.6
Nitab4.5_0000463g0210 Nicotiana tabacum HOM05D005444 ORTHO05D006773 4.4e-85 318.9 269 62.5
QL01p031522 Quercus lobata HOM05D005444 ORTHO05D006773 2.9e-84 316.2 278 62.6
Lsat_1_v5_gn_8_73500 Lactuca sativa HOM05D005444 ORTHO05D006773 6.4e-84 315.1 279 61.3
ECA236G0569 Erigeron canadensis HOM05D005444 ORTHO05D006773 1.9e-83 313.5 282 61.0
Cc01_g13010 Coffea canephora HOM05D005444 ORTHO05D006773 7.1e-83 311.6 273 61.9
Peaxi162Scf00774g00121 Petunia axillaris HOM05D005444 ORTHO05D006773 9.3e-83 311.2 269 61.7
CANSAT54G1668 Cannabis sativa HOM05D005444 ORTHO05D006773 2.7e-82 309.7 287 59.6
Atru.chr3.3946 Acer truncatum HOM05D005444 ORTHO05D006773 3.5e-82 309.3 271 61.6
CAN.G394.63 Capsicum annuum HOM05D005444 ORTHO05D006773 4.6e-82 308.9 271 59.8
Sc21g0005860 Simmondsia chinensis HOM05D005444 ORTHO05D006773 4.6e-82 308.9 270 60.4
Sopen06g032680 Solanum pennellii HOM05D005444 ORTHO05D006773 1.7e-81 307.0 271 59.4
Nitab4.5_0001326g0170 Nicotiana tabacum HOM05D005444 ORTHO05D006773 2.3e-81 306.6 294 56.8
Solyc06g076250.4 Solanum lycopersicum HOM05D005444 ORTHO05D006773 3.9e-81 305.8 270 59.3
FAN21G3395 Fragaria x ananassa HOM05D005444 ORTHO05D006773 6.6e-81 305.1 271 63.1
MD11G1099800 Malus domestica HOM05D005444 ORTHO05D006773 1.9e-80 303.5 281 60.5
FvH4_3g36480 Fragaria vesca HOM05D005444 ORTHO05D006773 3.3e-80 302.8 271 62.4
HanXRQChr06g0178811 Helianthus annuus HOM05D005444 ORTHO05D006773 1.6e-79 300.4 272 59.2
Potri.001G241400 Populus trichocarpa HOM05D005444 ORTHO05D006773 1.6e-79 300.4 280 60.7
PGSC0003DMG401030323 Solanum tuberosum HOM05D005444 ORTHO05D006773 1.6e-79 300.4 271 58.7
Migut.D02083 Erythranthe guttata HOM05D005444 ORTHO05D006773 2.8e-79 299.7 249 66.3
SalBow3G1488 Salvia bowleyana HOM05D005444 ORTHO05D006773 4.8e-79 298.9 269 61.3
MD03G1090200 Malus domestica HOM05D005444 ORTHO05D006773 1.1e-78 297.7 270 62.6
Potri.009G032300 Populus trichocarpa HOM05D005444 ORTHO05D006773 1.8e-78 297.0 276 59.4
Gohir.D07G103400 Gossypium hirsutum HOM05D005444 ORTHO05D006773 6.9e-78 295.0 273 58.6
RcHm_v2.0_Chr5g0065341 Rosa chinensis HOM05D005444 ORTHO05D006773 6.9e-78 295.0 267 60.7
Sabra16G0145900 Salix brachista HOM05D005444 ORTHO05D006773 6.9e-78 295.0 275 60.7
Gorai.001G111300 Gossypium raimondii HOM05D005444 ORTHO05D006773 2.0e-77 293.5 273 57.9
Aa31sc23G420 Aethionema arabicum HOM05D005444 ORTHO05D006773 2.6e-77 293.1 277 58.1
FAN16G3284 Fragaria x ananassa HOM05D005444 ORTHO05D006773 3.4e-77 292.7 308 55.2
HanXRQChr05g0135061 Helianthus annuus HOM05D005444 ORTHO05D006773 7.6e-77 291.6 282 58.5
TWI79G0937 Tripterygium wilfordii HOM05D005444 ORTHO05D006773 7.6e-77 291.6 274 59.1
Sp6g21080 Schrenkiella parvula HOM05D005444 ORTHO05D006773 9.9e-77 291.2 283 58.0
AL8G35870 Arabidopsis lyrata HOM05D005444 ORTHO05D006773 1.7e-76 290.4 278 57.6
Gohir.A07G098900 Gossypium hirsutum HOM05D005444 ORTHO05D006773 1.7e-76 290.4 273 58.6
Sabra09G0022900 Salix brachista HOM05D005444 ORTHO05D006773 2.2e-76 290.0 273 60.1
AT5G59400 Arabidopsis thaliana HOM05D005444 ORTHO05D006773 3.8e-76 289.3 278 57.2
Carub.0008s2007 Capsella rubella HOM05D005444 ORTHO05D006773 8.4e-76 288.1 280 57.1
FAN11G0832 Fragaria x ananassa HOM05D005444 ORTHO05D006773 1.4e-75 287.3 318 54.4
MELO3C020623.2 Cucumis melo HOM05D005444 ORTHO05D006773 1.9e-75 287.0 287 56.4
CsaV3_1G034350 Cucumis sativus L. HOM05D005444 ORTHO05D006773 1.9e-75 287.0 295 54.9
Oeu017397.1 Olea europaea HOM05D005444 ORTHO05D006773 3.2e-75 286.2 312 51.6
PSO339G5422 Papaver somniferum HOM05D005444 ORTHO05D006773 2.7e-74 283.1 277 57.0
Sed0025445 Sechium edule HOM05D005444 ORTHO05D006773 4.6e-74 282.3 270 58.1
Glyma.12G062600 Glycine max HOM05D005444 ORTHO05D006773 6.0e-74 282.0 272 57.0
PSO063G3487 Papaver somniferum HOM05D005444 ORTHO05D006773 7.9e-74 281.6 278 56.1
arahy.Tifrunner.gnm1.ann1.3F7RX4 Arachis hypogaea HOM05D005444 ORTHO05D006773 1.8e-73 280.4 276 56.5
Psat5g286680 Pisum sativum HOM05D005444 ORTHO05D006773 1.8e-73 280.4 242 64.0
Medtr2g097230 Medicago truncatula HOM05D005444 ORTHO05D006773 3.9e-73 279.3 274 58.4
COL.COLO4_18527 Corchorus olitorius HOM05D005444 ORTHO05D006773 5.1e-73 278.9 270 57.0
arahy.Tifrunner.gnm1.ann1.XH3YCC Arachis hypogaea HOM05D005444 ORTHO05D006773 6.7e-73 278.5 276 56.2
Lj3g0017515 Lotus japonicus HOM05D005444 ORTHO05D006773 6.7e-73 278.5 272 56.6
ClCG03G001420 Citrullus lanatus HOM05D005444 ORTHO05D006773 8.7e-73 278.1 332 49.7
BcaB08g36261 Brassica carinata HOM05D005444 ORTHO05D006773 1.1e-72 277.7 282 56.0
AUR62009560 Chenopodium quinoa HOM05D005444 ORTHO05D006773 1.5e-72 277.3 219 63.0
BcaC04g19778 Brassica carinata HOM05D005444 ORTHO05D006773 1.9e-72 276.9 280 55.7
A10p16600 Brassica napus HOM05D005444 ORTHO05D006773 1.9e-72 276.9 280 55.7
C09p51810 Brassica napus HOM05D005444 ORTHO05D006773 1.9e-72 276.9 280 55.7
BolC9t58042H Brassica oleracea HOM05D005444 ORTHO05D006773 1.9e-72 276.9 280 55.7
BraA10t43744Z Brassica rapa HOM05D005444 ORTHO05D006773 1.9e-72 276.9 280 55.7
Eucgr.B02353 Eucalyptus grandis HOM05D005444 ORTHO05D006773 1.9e-72 276.9 252 59.1
THA.LOC104810774 Tarenaya hassleriana HOM05D005444 ORTHO05D006773 9.6e-72 274.6 278 54.7
Phvul.011G063700 Phaseolus vulgaris HOM05D005444 ORTHO05D006773 4.8e-71 272.3 262 56.5
Hund04946 Selenicereus undatus HOM05D005444 ORTHO05D006773 4.8e-71 272.3 310 52.6
TPR.G34263 Trifolium pratense HOM05D005444 ORTHO05D006773 6.2e-71 271.9 274 55.5
EL10Ac7g16033 Beta vulgaris HOM05D005444 ORTHO05D006773 8.1e-71 271.6 220 61.8
CDE09G1090 Ceratophyllum demersum HOM05D005444 ORTHO05D006773 1.4e-70 270.8 278 54.0
FAN25G3546 Fragaria x ananassa HOM05D005444 ORTHO05D006773 2.4e-70 270.0 281 55.9
Ca_01319_v3 Cicer arietinum L. HOM05D005444 ORTHO05D006773 3.1e-70 269.6 255 58.8
VMungo1127G0766 Vigna mungo HOM05D005444 ORTHO05D006773 2.0e-69 266.9 270 55.2
Glyma.13G336800 Glycine max HOM05D005444 ORTHO05D006773 3.4e-69 266.2 249 57.4
Glyma.15G037500 Glycine max HOM05D005444 ORTHO05D006773 4.5e-69 265.8 219 61.6
CiPaw.13G092700 Carya illinoinensis HOM05D005444 ORTHO05D006773 5.8e-69 265.4 235 62.1
Lalb_Chr01g0003631 Lupinus albus HOM05D005444 ORTHO05D006773 4.9e-68 262.3 274 54.4
Phvul.L006243 Phaseolus vulgaris HOM05D005444 ORTHO05D006773 6.5e-68 261.9 271 52.4
ATR0559G091 Amborella trichopoda HOM05D005444 ORTHO05D006773 1.1e-67 261.2 274 52.2
VMungo1080G1107 Vigna mungo HOM05D000758 ORTHO05D002867 5.5e-67 258.8 247 58.3
Prupe.6G074400 Prunus persica HOM05D005444 ORTHO05D006773 3.0e-65 253.1 232 62.1
arahy.Tifrunner.gnm1.ann1.T6ZDSA Arachis hypogaea HOM05D005444 ORTHO05D006773 5.1e-65 252.3 247 58.3
arahy.Tifrunner.gnm1.ann1.9NI65Y Arachis hypogaea HOM05D005444 ORTHO05D006773 1.5e-64 250.8 247 57.9
CDE04G2637 Ceratophyllum demersum HOM05D005444 ORTHO05D006773 5.7e-64 248.8 237 55.3
Duzib168G1171 Durio zibethinus HOM05D005444 ORTHO05D006773 3.7e-63 246.1 232 58.6
Thecc.09G320000 Theobroma cacao HOM05D005444 ORTHO05D006773 3.7e-63 246.1 233 58.8
PGR102G1676 Punica granatum HOM05D005444 ORTHO05D006773 1.3e-60 237.7 269 50.6
SEGI_38540 Sequoiadendron giganteum HOM05D005444 ORTHO05D006773 7.1e-59 231.9 219 54.8
Oeu002422.1 Olea europaea HOM05D005444 ORTHO05D006773 1.6e-58 230.7 456 37.7
Ca_19148_v3 Cicer arietinum L. HOM05D005444 ORTHO05D006773 3.0e-57 226.5 230 54.3
Thhalv10014435m.g Eutrema salsugineum HOM05D005444 ORTHO05D006773 1.5e-56 224.2 250 52.8
Mapoly0050s0097 Marchantia polymorpha HOM05D005444 ORTHO05D006773 2.2e-55 220.3 225 50.2
AUR62001772 Chenopodium quinoa HOM05D005444 ORTHO05D006773 2.8e-55 219.9 243 51.0
Hund18899 Selenicereus undatus HOM05D005444 ORTHO05D006773 6.1e-50 202.2 248 50.0
HPP92_009462 Vanilla planifolia HOM05D005444 ORTHO05D006773 1.3e-47 194.5 199 53.8
Pp3c1_24530 Physcomitrium patens HOM05D005444 ORTHO05D006773 2.2e-47 193.7 237 44.7
AagrBONN_evm.TU.Sc2ySwM_368.577 Anthoceros agrestis HOM05D005444 ORTHO05D006773 5.3e-46 189.1 213 46.0
Aqoxy1G00927 Aquilegia oxysepala HOM05D005444 ORTHO05D006773 1.9e-43 180.6 132 72.7
SGA_v2.0_scaffold203G41535 Striga asiatica HOM05D005444 ORTHO05D006773 4.7e-42 176.0 129 69.0
Pp3c14_5400 Physcomitrium patens HOM05D005444 ORTHO05D006773 2.3e-41 173.7 211 43.6
DCAR_005353 Daucus carota HOM05D005444 ORTHO05D006773 1.3e-36 157.9 96 76.0
TPR.G1035 Trifolium pratense HOM05D005444 ORTHO05D006773 1.3e-36 157.9 171 52.0
SGA_v2.0_scaffold203G41537 Striga asiatica HOM05D005444 ORTHO05D006773 1.5e-35 154.5 116 69.8
unitig_747.g22036 Utricularia gibba HOM05D005444 ORTHO05D006773 3.2e-35 153.3 81 85.2
PGSC0003DMG402030323 Solanum tuberosum HOM05D005444 ORTHO05D006773 5.5e-35 152.5 111 65.8
TPR.G3768 Trifolium pratense HOM05D005444 ORTHO05D006773 1.6e-34 151.0 123 63.4
Aqoxy1G00926 Aquilegia oxysepala HOM05D005444 ORTHO05D006773 6.1e-34 149.1 92 77.2
Ah.15g097630 Amaranthus hybridus HOM05D005444 ORTHO05D006773 7.4e-32 142.1 128 56.2
CARHR285770 Cardamine hirsuta HOM05D005444 ORTHO05D006773 7.4e-32 142.1 103 64.1
Duzib170G0057 Durio zibethinus HOM05D005444 ORTHO05D006773 9.1e-30 135.2 215 44.2
HanXRQChr06g0167871 Helianthus annuus HOM05D000219 ORTHO05D006773 1.0e-28 131.7 116 60.3
HanXRQChr10g0291051 Helianthus annuus HOM05D005444 ORTHO05D006773 2.9e-28 130.2 86 72.1
HanXRQChr10g0291061 Helianthus annuus HOM05D005444 ORTHO05D006773 2.9e-28 130.2 86 72.1
MCO07G449 Micromonas commoda HOM05D005444 ORTHO05D006773 8.5e-28 128.6 203 38.9
Nn2g13370 Nelumbo nucifera HOM05D005444 ORTHO05D006773 2.5e-27 127.1 65 87.7
Os05g0110800 Oryza sativa ssp. japonica HOM05D005444 ORTHO05D006773 8.0e-26 122.1 70 81.4
unitig_747.g22037 Utricularia gibba HOM05D005444 ORTHO05D006773 8.8e-25 118.6 85 68.2
Zm00001eb355820 Zea mays HOM05D005444 ORTHO05D006773 2.0e-24 117.5 96 56.2
TPR.G27554 Trifolium pratense HOM05D005444 ORTHO05D006773 2.1e-18 97.4 64 71.9
Ah.15g097620 Amaranthus hybridus HOM05D005444 ORTHO05D006773 4.4e-16 89.7 166 37.3
Medtr4g064030 Medicago truncatula HOM05D005444 ORTHO05D006773 2.8e-15 87.0 92 52.2
AUR62031662 Chenopodium quinoa HOM05D001050 ORTHO05D001270 3.7e-15 86.7 48 77.1
TPR.G376 Trifolium pratense HOM05D025391 ORTHO05D030167 2.4e-14 84.0 42 85.7
Psat5g007960 Pisum sativum HOM05D005444 ORTHO05D006773 7.0e-14 82.4 72 58.3
Psat4g229040 Pisum sativum HOM05D005444 ORTHO05D006773 1.3e-12 78.2 46 76.1
Nitab4.5_0003274g0090 Nicotiana tabacum HOM05D003763 ORTHO05D004315 8.0e-10 68.9 178 28.1
CBR_g23735 Chara braunii HOM05D003763 ORTHO05D004315 8.9e-09 65.5 191 25.1
BcaB01g04587 Brassica carinata HOM05D000021 ORTHO05D000010 1.5e-08 64.7 37 81.1
SMO356G0021 Selaginella moellendorffii HOM05D003763 ORTHO05D004315 5.7e-08 62.8 199 27.6
TPR.G27777 Trifolium pratense HOM05D005444 ORTHO05D006773 2.9e-07 60.5 39 69.2
TAR636G2897 Trochodendron aralioides HOM05D005444 ORTHO05D006773 8.3e-07 58.9 48 60.4
Phvul.005G077000 Phaseolus vulgaris HOM05D005444 ORTHO05D006773 1.4e-06 58.2 36 69.4
Zm00001eb065010 Zea mays HOM05D003763 ORTHO05D004315 3.2e-06 57.0 168 29.2
COL.COLO4_35627 Corchorus olitorius HOM05D005444 ORTHO05D001950 9.2e-06 55.5 56 57.1


User provided reference genes

Program Settings