Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv43072 Davidia involucrata HOM05D038556 ORTHO05D009326 2.5e-134 482.3 267 100.0
Dinv43441 Davidia involucrata HOM05D038556 ORTHO05D184021 4.5e-67 258.8 156 87.2
Dinv31296 Davidia involucrata HOM05D038556 ORTHO05D010907 1.8e-39 167.2 100 84.0
Dinv44077 Davidia involucrata HOM05D000442 ORTHO05D009326 2.9e-34 149.8 139 61.9
Dinv43636 Davidia involucrata HOM05D000442 ORTHO05D009326 1.3e-29 134.4 129 60.5
Oeu063224.2 Olea europaea HOM05D000442 ORTHO05D009326 4.8e-29 132.5 144 53.5
Nitab4.5_0002874g0040 Nicotiana tabacum HOM05D000442 ORTHO05D009326 9.1e-28 128.3 80 81.2
Nitab4.5_0003553g0140 Nicotiana tabacum HOM05D000442 ORTHO05D009326 9.1e-28 128.3 80 81.2
Oeu024194.2 Olea europaea HOM05D000442 ORTHO05D009326 1.2e-27 127.9 139 53.2
Prupe.2G125700 Prunus persica HOM05D000442 ORTHO05D009326 2.0e-27 127.1 80 81.2
Actinidia33497 Actinidia chinensis HOM05D000442 ORTHO05D009326 2.6e-27 126.7 75 86.7
vmacro13483 Vaccinium macrocarpon HOM05D000442 ORTHO05D009326 2.6e-27 126.7 75 84.0
CANSAT21G1488 Cannabis sativa HOM05D000442 ORTHO05D009326 5.9e-27 125.6 75 85.3
CAN.G362.15 Capsicum annuum HOM05D000442 ORTHO05D009326 5.9e-27 125.6 80 76.2
Rhsim07G0034500 Rhododendron simsii HOM05D000442 ORTHO05D009326 5.9e-27 125.6 124 58.1
TWI14G0054 Tripterygium wilfordii HOM05D000442 ORTHO05D009326 5.9e-27 125.6 75 85.3
TWI14G0777 Tripterygium wilfordii HOM05D000442 ORTHO05D009326 5.9e-27 125.6 75 85.3
PGSC0003DMG400025983 Solanum tuberosum HOM05D000442 ORTHO05D009326 1.0e-26 124.8 80 77.5
Actinidia12654 Actinidia chinensis HOM05D000442 ORTHO05D009326 1.3e-26 124.4 75 85.3
Lsat_1_v5_gn_4_46721 Lactuca sativa HOM05D000442 ORTHO05D009326 1.3e-26 124.4 73 84.9
MELO3C022266.2 Cucumis melo HOM05D000442 ORTHO05D009326 1.7e-26 124.0 81 77.8
CsaV3_6G008530 Cucumis sativus L. HOM05D000442 ORTHO05D009326 1.7e-26 124.0 81 77.8
MD00G1041200 Malus domestica HOM05D000442 ORTHO05D009326 1.7e-26 124.0 75 84.0
arahy.Tifrunner.gnm1.ann1.75PF94 Arachis hypogaea HOM05D000442 ORTHO05D009326 2.2e-26 123.6 75 85.3
arahy.Tifrunner.gnm1.ann1.W2MREN Arachis hypogaea HOM05D000442 ORTHO05D009326 2.2e-26 123.6 75 85.3
HanXRQChr09g0241671 Helianthus annuus HOM05D000442 ORTHO05D009326 2.2e-26 123.6 139 50.4
Solyc01g090480.4 Solanum lycopersicum HOM05D000442 ORTHO05D009326 2.2e-26 123.6 79 77.2
Peaxi162Scf00392g00023 Petunia axillaris HOM05D000442 ORTHO05D009326 2.9e-26 123.2 80 77.5
ClCG06G002610 Citrullus lanatus HOM05D000442 ORTHO05D009326 5.0e-26 122.5 80 78.8
Lj1g0004592 Lotus japonicus HOM05D000442 ORTHO05D009326 5.0e-26 122.5 75 81.3
Sopen01g036270 Solanum pennellii HOM05D000442 ORTHO05D009326 5.0e-26 122.5 79 77.2
Lalb_Chr03g0040261 Lupinus albus HOM05D000442 ORTHO05D009326 8.5e-26 121.7 80 77.5
Atru.chr5.166 Acer truncatum HOM05D000442 ORTHO05D009326 1.5e-25 120.9 82 75.6
DCAR_015826 Daucus carota HOM05D000442 ORTHO05D009326 1.5e-25 120.9 74 81.1
RcHm_v2.0_Chr1g0346751 Rosa chinensis HOM05D000442 ORTHO05D009326 1.5e-25 120.9 75 80.0
Ciclev10021057m.g Citrus clementina HOM05D000442 ORTHO05D009326 1.9e-25 120.6 75 81.3
Eucgr.E01578 Eucalyptus grandis HOM05D000442 ORTHO05D009326 1.9e-25 120.6 80 78.8
GSVIVG01018244001 Vitis vinifera HOM05D000442 ORTHO05D009326 1.9e-25 120.6 75 78.7
Cc02_g24870 Coffea canephora HOM05D000442 ORTHO05D009326 2.5e-25 120.2 144 50.7
FAN10G3347 Fragaria x ananassa HOM05D000442 ORTHO05D009326 2.5e-25 120.2 75 81.3
PGR042G2633 Punica granatum HOM05D000442 ORTHO05D009326 2.5e-25 120.2 74 83.8
TAR629G1240 Trochodendron aralioides HOM05D000442 ORTHO05D009326 2.5e-25 120.2 75 80.0
Manes.01G271900 Manihot esculenta HOM05D000442 ORTHO05D009326 3.2e-25 119.8 83 78.3
ECA240G1042 Erigeron canadensis HOM05D000442 ORTHO05D009326 5.5e-25 119.0 114 57.9
CiPaw.14G021900 Carya illinoinensis HOM05D000442 ORTHO05D009326 7.2e-25 118.6 75 82.7
FAN10G0134 Fragaria x ananassa HOM05D000442 ORTHO05D009326 7.2e-25 118.6 75 80.0
Glyma.09G247400 Glycine max HOM05D000442 ORTHO05D009326 7.2e-25 118.6 75 80.0
Glyma.18G245600 Glycine max HOM05D000442 ORTHO05D009326 9.4e-25 118.2 75 80.0
Gohir.A08G059300 Gossypium hirsutum HOM05D000442 ORTHO05D009326 9.4e-25 118.2 78 79.5
Gohir.D08G068500 Gossypium hirsutum HOM05D000442 ORTHO05D009326 9.4e-25 118.2 78 79.5
Gorai.004G071700 Gossypium raimondii HOM05D000442 ORTHO05D009326 9.4e-25 118.2 78 79.5
TPR.G27404 Trifolium pratense HOM05D000442 ORTHO05D009326 1.2e-24 117.9 75 80.0
Phvul.008G051300 Phaseolus vulgaris HOM05D000442 ORTHO05D009326 1.6e-24 117.5 75 78.7
VMungo1383G2615 Vigna mungo HOM05D000442 ORTHO05D009326 1.6e-24 117.5 75 78.7
Haze_02804 Corylus avellana HOM05D000442 ORTHO05D009326 2.1e-24 117.1 75 80.0
FvH4_7g09750 Fragaria vesca HOM05D000442 ORTHO05D009326 2.1e-24 117.1 75 80.0
FAN06G3168 Fragaria x ananassa HOM05D000442 ORTHO05D009326 2.1e-24 117.1 75 80.0
FAN06G4385 Fragaria x ananassa HOM05D000442 ORTHO05D009326 2.1e-24 117.1 75 80.0
Psat3g103800 Pisum sativum HOM05D000442 ORTHO05D009326 2.1e-24 117.1 75 78.7
SalBow8G0929 Salvia bowleyana HOM05D000442 ORTHO05D009326 2.1e-24 117.1 139 50.4
SalBow8G4477 Salvia bowleyana HOM05D000442 ORTHO05D009326 2.1e-24 117.1 139 50.4
Sed0020404 Sechium edule HOM05D000442 ORTHO05D009326 2.1e-24 117.1 75 80.0
SGA_v2.0_scaffold153G36919 Striga asiatica HOM05D000442 ORTHO05D009326 2.7e-24 116.7 145 47.6
Ca_08021_v3 Cicer arietinum L. HOM05D000442 ORTHO05D009326 3.6e-24 116.3 75 78.7
Duzib138G1597 Durio zibethinus HOM05D000442 ORTHO05D009326 3.6e-24 116.3 85 74.1
Cfa011092 Carpinus fangiana HOM05D000442 ORTHO05D009326 4.7e-24 115.9 75 81.3
COL.COLO4_12431 Corchorus olitorius HOM05D000442 ORTHO05D009326 6.1e-24 115.5 78 79.5
unitig_22.g5402 Utricularia gibba HOM05D000442 ORTHO05D009326 6.1e-24 115.5 114 54.4
Thecc.01G392200 Theobroma cacao HOM05D000442 ORTHO05D009326 8.0e-24 115.2 78 76.9
Cpa.g.sc101.31 Carica papaya HOM05D000442 ORTHO05D009326 1.0e-23 114.8 75 81.3
Medtr7g080630 Medicago truncatula HOM05D000442 ORTHO05D009326 1.0e-23 114.8 75 78.7
MBI04_g34105_MAGBIO Magnolia biondii HOM05D000442 ORTHO05D009326 1.8e-23 114.0 80 72.5
QL04p031132 Quercus lobata HOM05D000442 ORTHO05D009326 2.3e-23 113.6 75 78.7
Migut.B01554 Erythranthe guttata HOM05D000442 ORTHO05D009326 6.7e-23 112.1 144 46.5
Duzib268G1535 Durio zibethinus HOM05D000442 ORTHO05D009326 8.8e-23 111.7 78 74.4
Nn1g00904 Nelumbo nucifera HOM05D000442 ORTHO05D009326 5.7e-22 109.0 74 73.0
Potri.014G045000 Populus trichocarpa HOM05D000442 ORTHO05D009326 3.7e-21 106.3 88 71.6
EL10Ac1g00787 Beta vulgaris HOM05D000442 ORTHO05D009326 5.3e-20 102.4 67 77.6
Sabra14G0032800 Salix brachista HOM05D000442 ORTHO05D009326 5.3e-20 102.4 153 45.8
Hund27401 Selenicereus undatus HOM05D000442 ORTHO05D009326 2.0e-19 100.5 71 73.2
PSO732G0532 Papaver somniferum HOM05D000442 ORTHO05D009326 4.5e-19 99.4 125 49.6
Ah.01g010240 Amaranthus hybridus HOM05D000442 ORTHO05D009326 5.9e-19 99.0 62 80.6
Sc23g0003970 Simmondsia chinensis HOM05D000442 ORTHO05D009326 6.5e-18 95.5 148 41.2
SHI13606 Sapria himalayana HOM05D000442 ORTHO05D009326 3.2e-17 93.2 81 60.5
AUR62018051 Chenopodium quinoa HOM05D000442 ORTHO05D009326 2.7e-16 90.1 79 62.0
CDE02G3159 Ceratophyllum demersum HOM05D000442 ORTHO05D009326 5.2e-15 85.9 74 59.5
Aqoxy7G00817 Aquilegia oxysepala HOM05D000442 ORTHO05D009326 8.8e-15 85.1 74 62.2
ATR0057G091 Amborella trichopoda HOM05D000442 ORTHO05D009326 4.4e-14 82.8 124 44.4
CDE11G0174 Ceratophyllum demersum HOM05D000442 ORTHO05D009326 7.5e-14 82.0 61 67.2
Atru.chr10.164 Acer truncatum HOM05D000442 ORTHO05D009326 4.1e-12 76.3 77 61.0
Lsat_1_v5_gn_9_11060 Lactuca sativa HOM05D001347 ORTHO05D001198 4.1e-12 76.3 51 74.5
SMO228G0027 Selaginella moellendorffii HOM05D047673 ORTHO05D009326 7.0e-12 75.5 76 53.9
SEGI_09367 Sequoiadendron giganteum HOM05D000442 ORTHO05D009326 2.7e-11 73.6 60 61.7
Lsat_1_v5_gn_6_97941 Lactuca sativa HOM05D000442 ORTHO05D009326 1.7e-10 70.9 68 54.4
Mapoly0012s0195 Marchantia polymorpha HOM05D000442 ORTHO05D009326 2.2e-10 70.5 65 53.8
AagrBONN_evm.TU.Sc2ySwM_117.1204 Anthoceros agrestis HOM05D000442 ORTHO05D009326 1.5e-09 67.8 130 39.2
AUR62013724 Chenopodium quinoa HOM05D000442 ORTHO05D009326 1.2e-08 64.7 41 78.0
AagrBONN_evm.TU.Sc2ySwM_344.2593 Anthoceros agrestis HOM05D001376 ORTHO05D003384 2.0e-06 57.4 74 45.9
Mapoly0051s0075 Marchantia polymorpha HOM05D001376 ORTHO05D003384 2.6e-06 57.0 73 46.6
CBR_g16930 Chara braunii HOM05D000442 ORTHO05D009326 5.7e-06 55.8 92 40.2
Pp3c10_4760 Physcomitrium patens HOM05D001376 ORTHO05D003384 9.8e-06 55.1 53 56.6


User provided reference genes

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