Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv43063 Davidia involucrata HOM05D000834 ORTHO05D183077 1.6e-32 142.1 70 100.0
CSS0037788 Camellia sinensis var. sinensis HOM05D000834 ORTHO05D006956 3.5e-11 71.2 34 97.1
CSS0005533 Camellia sinensis var. sinensis HOM05D000834 ORTHO05D006956 1.0e-10 69.7 58 62.1
CSS0050145 Camellia sinensis var. sinensis HOM05D000834 ORTHO05D006956 1.7e-10 68.9 36 94.4
TAR362G0351 Trochodendron aralioides HOM05D000834 ORTHO05D006956 6.5e-10 67.0 34 88.2
QL09p041638 Quercus lobata HOM05D000834 ORTHO05D006956 1.5e-09 65.9 50 70.0
CDE02G1088 Ceratophyllum demersum HOM05D000834 ORTHO05D006956 1.9e-09 65.5 34 88.2
Actinidia23703 Actinidia chinensis HOM05D000834 ORTHO05D006956 2.5e-09 65.1 32 93.8
Cfa002491 Carpinus fangiana HOM05D000834 ORTHO05D006956 2.5e-09 65.1 32 93.8
Haze_24714 Corylus avellana HOM05D000834 ORTHO05D006956 2.5e-09 65.1 32 93.8
Potri.014G193300 Populus trichocarpa HOM05D000834 ORTHO05D006956 7.2e-09 63.5 32 87.5
Ah.08g213640 Amaranthus hybridus HOM05D000834 ORTHO05D006956 9.4e-09 63.2 34 85.3
CiPaw.03G271600 Carya illinoinensis HOM05D000834 ORTHO05D006956 9.4e-09 63.2 32 87.5
SGA_v2.0_scaffold1G00665 Striga asiatica HOM05D000121 ORTHO05D000102 9.4e-09 63.2 34 88.2
Ca_09644_v3 Cicer arietinum L. HOM05D000834 ORTHO05D006956 1.2e-08 62.8 50 68.0
Medtr1g069455 Medicago truncatula HOM05D000834 ORTHO05D006956 1.2e-08 62.8 51 64.7
Actinidia09509 Actinidia chinensis HOM05D000834 ORTHO05D006956 1.6e-08 62.4 32 90.6
CANSAT01G0496 Cannabis sativa HOM05D000834 ORTHO05D006956 1.6e-08 62.4 50 66.0
CANSAT01G1591 Cannabis sativa HOM05D000834 ORTHO05D006956 1.6e-08 62.4 50 66.0
CDE09G1390 Ceratophyllum demersum HOM05D000834 ORTHO05D006956 2.1e-08 62.0 34 85.3
Migut.D00483 Erythranthe guttata HOM05D000834 ORTHO05D006956 2.1e-08 62.0 32 90.6
Lj5g0006902 Lotus japonicus HOM05D000834 ORTHO05D006956 2.1e-08 62.0 50 68.0
Nn1g03003 Nelumbo nucifera HOM05D000834 ORTHO05D006956 2.7e-08 61.6 34 85.3
Glyma.13G127400 Glycine max HOM05D000834 ORTHO05D006956 3.6e-08 61.2 50 68.0
MD05G1187700 Malus domestica HOM05D000834 ORTHO05D006956 3.6e-08 61.2 50 68.0
MD10G1175400 Malus domestica HOM05D000834 ORTHO05D006956 3.6e-08 61.2 50 68.0
Manes.13G039100 Manihot esculenta HOM05D000834 ORTHO05D006956 3.6e-08 61.2 32 87.5
Prupe.8G214700 Prunus persica HOM05D000834 ORTHO05D006956 3.6e-08 61.2 36 83.3
Potri.002G255900 Populus trichocarpa HOM05D000834 ORTHO05D006956 4.7e-08 60.8 32 84.4
Rhsim01G0259900 Rhododendron simsii HOM05D000834 ORTHO05D006956 4.7e-08 60.8 52 59.6
Lj1C74T17 Lonicera japonica HOM05D000834 ORTHO05D006956 6.1e-08 60.5 30 93.3
Hund05490 Selenicereus undatus HOM05D000834 ORTHO05D006956 6.1e-08 60.5 32 87.5
VMungo0720G2048 Vigna mungo HOM05D000834 ORTHO05D006956 8.0e-08 60.1 50 66.0
GSVIVG01028438001 Vitis vinifera HOM05D000834 ORTHO05D006956 8.0e-08 60.1 50 68.0
Atru.chr5.1869 Acer truncatum HOM05D000834 ORTHO05D006956 1.0e-07 59.7 57 59.6
Aqoxy5G00122 Aquilegia oxysepala HOM05D000834 ORTHO05D006956 1.0e-07 59.7 34 79.4
FvH4_2g20370 Fragaria vesca HOM05D000834 ORTHO05D006956 1.0e-07 59.7 36 80.6
FAN24G3261 Fragaria x ananassa HOM05D000834 ORTHO05D006956 1.0e-07 59.7 38 71.1
Psat6g062480 Pisum sativum HOM05D000834 ORTHO05D006956 1.0e-07 59.7 32 84.4
TPR.G5902 Trifolium pratense HOM05D000834 ORTHO05D006956 1.0e-07 59.7 55 61.8
vmacro14792 Vaccinium macrocarpon HOM05D000834 ORTHO05D006956 1.0e-07 59.7 36 77.8
Manes.12G038400 Manihot esculenta HOM05D000834 ORTHO05D006956 1.4e-07 59.3 32 87.5
Oeu015439.4 Olea europaea HOM05D000121 ORTHO05D000102 1.4e-07 59.3 34 82.4
RcHm_v2.0_Chr6g0286481 Rosa chinensis HOM05D000834 ORTHO05D006956 1.4e-07 59.3 32 84.4
DCAR_004694 Daucus carota HOM05D000834 ORTHO05D006956 1.8e-07 58.9 38 76.3
FAN27G0744 Fragaria x ananassa HOM05D000834 ORTHO05D006956 1.8e-07 58.9 32 81.2
MBI07_g22384_MAGBIO Magnolia biondii HOM05D000834 ORTHO05D006956 3.0e-07 58.2 34 82.4
PSO764G0197 Papaver somniferum HOM05D000834 ORTHO05D006956 3.0e-07 58.2 32 78.1
PSO832G2974 Papaver somniferum HOM05D000834 ORTHO05D006956 3.0e-07 58.2 32 78.1
ClCG06G001380 Citrullus lanatus HOM05D000834 ORTHO05D006956 4.0e-07 57.8 56 58.9
Sabra02G0194500 Salix brachista HOM05D000834 ORTHO05D006956 4.0e-07 57.8 36 80.6
TWI12G0869 Tripterygium wilfordii HOM05D000834 ORTHO05D006956 4.0e-07 57.8 32 81.2
COL.COLO4_02902 Corchorus olitorius HOM05D000834 ORTHO05D006956 5.2e-07 57.4 37 81.1
MELO3C022394.2 Cucumis melo HOM05D000834 ORTHO05D006956 5.2e-07 57.4 36 80.6
CsaV3_6G007320 Cucumis sativus L. HOM05D000834 ORTHO05D006956 5.2e-07 57.4 62 53.2
Eucgr.K01422 Eucalyptus grandis HOM05D000834 ORTHO05D006956 5.2e-07 57.4 36 80.6
Sc05g0002850 Simmondsia chinensis HOM05D000834 ORTHO05D006956 5.2e-07 57.4 32 84.4
Duzib138G0050 Durio zibethinus HOM05D000834 ORTHO05D006956 6.7e-07 57.0 37 81.1
FAN15G3585 Fragaria x ananassa HOM05D000834 ORTHO05D006956 6.7e-07 57.0 32 78.1
Gohir.A11G133900 Gossypium hirsutum HOM05D000834 ORTHO05D006956 6.7e-07 57.0 51 62.7
Cc01_g17740 Coffea canephora HOM05D000834 ORTHO05D006956 8.8e-07 56.6 42 64.3
ECA248G1156 Erigeron canadensis HOM05D000121 ORTHO05D000102 8.8e-07 56.6 31 90.3
Gohir.D11G140000 Gossypium hirsutum HOM05D000834 ORTHO05D006956 8.8e-07 56.6 37 78.4
Gorai.007G150200 Gossypium raimondii HOM05D000834 ORTHO05D006956 8.8e-07 56.6 37 78.4
Phvul.007G153700 Phaseolus vulgaris HOM05D000834 ORTHO05D006956 8.8e-07 56.6 50 62.0
Sed0018887 Sechium edule HOM05D000834 ORTHO05D006956 8.8e-07 56.6 50 64.0
MSTRG.18357 Avicennia marina HOM05D000834 ORTHO05D006956 1.2e-06 56.2 32 81.2
Thecc.01G249300 Theobroma cacao HOM05D000834 ORTHO05D006956 1.2e-06 56.2 37 78.4
arahy.Tifrunner.gnm1.ann1.G250MW Arachis hypogaea HOM05D000834 ORTHO05D006956 1.5e-06 55.8 32 81.2
arahy.Tifrunner.gnm1.ann1.WYWU3M Arachis hypogaea HOM05D000834 ORTHO05D006956 1.5e-06 55.8 32 81.2
HanXRQChr01g0014941 Helianthus annuus HOM05D000834 ORTHO05D006956 1.5e-06 55.8 32 84.4
PGR044G1351 Punica granatum HOM05D000834 ORTHO05D006956 2.0e-06 55.5 32 78.1
Lsat_1_v5_gn_5_181100 Lactuca sativa HOM05D000834 ORTHO05D006956 2.6e-06 55.1 32 84.4
unitig_22.g6307 Utricularia gibba HOM05D000834 ORTHO05D006956 4.4e-06 54.3 45 62.2
A09p12840 Brassica napus HOM05D000834 ORTHO05D006956 5.7e-06 53.9 36 75.0
BraA09t36931Z Brassica rapa HOM05D000834 ORTHO05D006956 5.7e-06 53.9 36 75.0
CARHR110880 Cardamine hirsuta HOM05D000834 ORTHO05D006956 5.7e-06 53.9 50 56.0
Cpa.g.sc87.39 Carica papaya HOM05D000834 ORTHO05D006956 5.7e-06 53.9 32 75.0
BcaC07g41219 Brassica carinata HOM05D000834 ORTHO05D006956 7.5e-06 53.5 31 80.6
A09p58940 Brassica napus HOM05D000834 ORTHO05D006956 7.5e-06 53.5 31 80.6
C08p42260 Brassica napus HOM05D000834 ORTHO05D006956 7.5e-06 53.5 31 80.6
BolC8t51785H Brassica oleracea HOM05D000834 ORTHO05D006956 7.5e-06 53.5 31 80.6
BraA09t41279Z Brassica rapa HOM05D000834 ORTHO05D006956 7.5e-06 53.5 31 80.6
Aa31LG8G17350 Aethionema arabicum HOM05D000834 ORTHO05D006956 9.7e-06 53.1 31 80.6


User provided reference genes

Program Settings