Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv43062 Davidia involucrata HOM05D012034 ORTHO05D014208 1.5e-154 549.7 311 100.0
Dinv03130 Davidia involucrata HOM05D012034 ORTHO05D014208 7.0e-64 248.4 236 65.3
Dinv15554 Davidia involucrata HOM05D012034 ORTHO05D014208 1.3e-57 227.6 226 62.4
Dinv34269 Davidia involucrata HOM05D012034 ORTHO05D014208 7.8e-55 218.4 201 66.7
Dinv04551 Davidia involucrata HOM05D012034 ORTHO05D014208 8.6e-54 214.9 201 65.7
Dinv11543 Davidia involucrata HOM05D012034 ORTHO05D014208 9.5e-53 211.5 201 64.7
Dinv19277 Davidia involucrata HOM05D012034 ORTHO05D014208 6.2e-52 208.8 199 63.8
Dinv21502 Davidia involucrata HOM05D012034 ORTHO05D014208 8.1e-52 208.4 201 65.2
Dinv34270 Davidia involucrata HOM05D012034 ORTHO05D014208 1.4e-51 207.6 201 63.7
Dinv17115 Davidia involucrata HOM05D012034 ORTHO05D014208 2.3e-51 206.8 200 63.5
Dinv05736 Davidia involucrata HOM05D012034 ORTHO05D014208 6.8e-51 205.3 172 68.6
Dinv15965 Davidia involucrata HOM05D012034 ORTHO05D014208 1.0e-46 191.4 154 72.1
Dinv18231 Davidia involucrata HOM05D012034 ORTHO05D014208 1.0e-46 191.4 154 72.1
Dinv11073 Davidia involucrata HOM05D012034 ORTHO05D014208 3.7e-41 172.9 136 70.6
Dinv02278 Davidia involucrata HOM05D007376 ORTHO05D006265 2.6e-26 123.6 399 30.8
Dinv17528 Davidia involucrata HOM05D007376 ORTHO05D001590 2.1e-23 114.0 94 62.8
CSS0015660 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.8e-12 77.0 91 41.8
CSS0047144 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.7e-12 76.6 91 40.7
TWI77G0254 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 3.7e-12 76.6 89 44.9
CSS0005751 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D001590 1.8e-11 74.3 91 40.7
CSS0022638 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.4e-11 73.9 91 40.7
CSS0008720 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.1e-11 73.6 91 39.6
CSS0003731 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.3e-11 72.8 91 39.6
CSS0006787 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.3e-11 72.8 91 39.6
CSS0007760 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.3e-11 72.8 91 39.6
CSS0012255 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.3e-11 72.8 91 39.6
CSS0013786 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.3e-11 72.8 91 39.6
CSS0029408 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.3e-11 72.8 91 39.6
CSS0035720 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.3e-11 72.8 91 39.6
CSS0037609 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.3e-11 72.8 91 39.6
Dinv02273 Davidia involucrata HOM05D008484 ORTHO05D007523 6.9e-11 72.4 85 43.5
Dinv26436 Davidia involucrata HOM05D000178 ORTHO05D006265 6.9e-11 72.4 85 43.5
CSS0047960 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.2e-10 71.6 137 32.1
Rhsim02G0073600 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.7e-09 67.8 91 41.8
RhsimUnG0063200 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.7e-09 67.8 91 41.8
RhsimUnG0211900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.7e-09 67.8 91 41.8
Rhsim01G0084000 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.2e-09 67.4 91 41.8
vmacro15448 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 8.4e-09 65.5 88 37.5
CSS0009315 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.4e-08 64.7 91 36.3
CSS0034277 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 2.5e-08 63.9 91 35.2
Rhsim02G0117900 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.5e-08 63.9 91 40.7
CSS0004408 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 3.2e-08 63.5 91 35.2
CSS0042152 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 7.1e-08 62.4 83 38.6
Rhsim04G0158100 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.1e-08 62.4 95 34.7
CSS0022103 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 9.3e-08 62.0 88 33.0
CSS0013773 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.6e-07 61.2 67 44.8
Rhsim08G0151400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-07 61.2 88 39.8
CSS0048517 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 2.1e-07 60.8 120 29.2
CSS0026649 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 6.0e-07 59.3 67 43.3
TWI63G0295 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 6.0e-07 59.3 84 39.3
CSS0005845 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 7.9e-07 58.9 80 37.5
CSS0027262 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 7.9e-07 58.9 91 34.1
vmacro09226 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 7.9e-07 58.9 94 30.9
FAN16G1555 Fragaria x ananassa HOM05D011367 ORTHO05D001590 1.3e-06 58.2 86 36.0
FAN16G3252 Fragaria x ananassa HOM05D011367 ORTHO05D001590 1.3e-06 58.2 86 36.0
Rhsim05G0207800 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.8e-06 57.8 66 42.4
Dinv07039 Davidia involucrata HOM05D016318 ORTHO05D014208 2.3e-06 57.4 75 37.3
vmacro18964 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 3.9e-06 56.6 88 37.5
CSS0037922 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 5.1e-06 56.2 70 38.6
CSS0024257 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 8.7e-06 55.5 64 42.2
FAN08G0328 Fragaria x ananassa HOM05D001313 ORTHO05D001590 8.7e-06 55.5 96 36.5
Rhsim04G0033200 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.7e-06 55.5 91 35.2


User provided reference genes

Program Settings