Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv17065 Davidia involucrata HOM05D001463 ORTHO05D001282 2.7e-39 164.9 83 100.0
Dinv43009 Davidia involucrata HOM05D001463 ORTHO05D001282 2.7e-39 164.9 83 100.0
Dinv43088 Davidia involucrata HOM05D001463 ORTHO05D001282 2.7e-39 164.9 83 100.0
Ciclev10029407m.g Citrus clementina HOM05D001463 ORTHO05D001282 7.5e-21 103.6 80 66.2
CiPaw.14G063800 Carya illinoinensis HOM05D001463 ORTHO05D001282 1.3e-20 102.8 81 69.1
Manes.02G126600 Manihot esculenta HOM05D001463 ORTHO05D001282 3.1e-19 98.2 66 74.2
CiPaw.13G087300 Carya illinoinensis HOM05D001463 ORTHO05D001282 2.7e-18 95.1 83 61.4
Prupe.6G067400 Prunus persica HOM05D001463 ORTHO05D001282 7.7e-18 93.6 73 68.5
Potri.009G038300 Populus trichocarpa HOM05D001463 ORTHO05D001282 1.0e-17 93.2 66 74.2
FAN16G2865 Fragaria x ananassa HOM05D001463 ORTHO05D001282 2.9e-17 91.7 73 71.2
RcHm_v2.0_Chr5g0066931 Rosa chinensis HOM05D001463 ORTHO05D001282 2.9e-17 91.7 74 68.9
FvH4_3g37190 Fragaria vesca HOM05D001463 ORTHO05D001282 8.5e-17 90.1 80 61.2
FAN25G3555 Fragaria x ananassa HOM05D001463 ORTHO05D001282 8.5e-17 90.1 80 61.2
FAN21G1105 Fragaria x ananassa HOM05D001463 ORTHO05D001282 4.2e-16 87.8 80 60.0
FAN11G0374 Fragaria x ananassa HOM05D001463 ORTHO05D001282 5.5e-16 87.4 80 60.0
CSS0002888 Camellia sinensis var. sinensis HOM05D001463 ORTHO05D001282 1.6e-15 85.9 76 64.5
Cpa.g.sc81.54 Carica papaya HOM05D001463 ORTHO05D001282 1.6e-15 85.9 65 66.2
CSS0044115 Camellia sinensis var. sinensis HOM05D001463 ORTHO05D001282 2.1e-15 85.5 77 63.6
Actinidia34435 Actinidia chinensis HOM05D001463 ORTHO05D001282 8.0e-15 83.6 72 65.3
CANSAT54G2006 Cannabis sativa HOM05D001463 ORTHO05D001282 1.4e-14 82.8 73 60.3
GSVIVG01024854001 Vitis vinifera HOM05D001463 ORTHO05D001282 3.0e-14 81.6 71 66.2
MD03G1083100 Malus domestica HOM05D001463 ORTHO05D001282 4.0e-14 81.3 63 71.4
MD11G1091200 Malus domestica HOM05D001463 ORTHO05D001282 2.0e-13 79.0 61 72.1
TAR369G0036 Trochodendron aralioides HOM05D001463 ORTHO05D001282 4.4e-13 77.8 80 57.5
TWI31G0608 Tripterygium wilfordii HOM05D001463 ORTHO05D001282 5.7e-13 77.4 68 64.7
Haze_24203 Corylus avellana HOM05D001463 ORTHO05D001282 9.8e-13 76.6 81 56.8
Cfa011585 Carpinus fangiana HOM05D001463 ORTHO05D001282 1.3e-12 76.3 74 62.2
Rhsim01G0233300 Rhododendron simsii HOM05D001463 ORTHO05D001282 2.2e-12 75.5 77 53.2
Eucgr.B02296 Eucalyptus grandis HOM05D001463 ORTHO05D001282 3.7e-12 74.7 69 63.8
TAR623G0111 Trochodendron aralioides HOM05D001463 ORTHO05D001282 1.1e-11 73.2 81 58.0
COL.COLO4_18603 Corchorus olitorius HOM05D001463 ORTHO05D001282 2.4e-11 72.0 81 51.9
Gohir.D05G092800 Gossypium hirsutum HOM05D001463 ORTHO05D001282 2.4e-11 72.0 72 59.7
Gorai.009G095400 Gossypium raimondii HOM05D001463 ORTHO05D001282 4.1e-11 71.2 64 62.5
Sabra09G0027300 Salix brachista HOM05D001463 ORTHO05D001282 4.1e-11 71.2 91 49.5
Gohir.A05G092000 Gossypium hirsutum HOM05D001463 ORTHO05D001282 5.4e-11 70.9 64 60.9
Nitab4.5_0000839g0160 Nicotiana tabacum HOM05D001463 ORTHO05D001282 5.4e-11 70.9 65 60.0
Manes.09G098500 Manihot esculenta HOM05D001463 ORTHO05D001282 7.0e-11 70.5 72 59.7
TWI56G1206 Tripterygium wilfordii HOM05D001463 ORTHO05D001282 7.0e-11 70.5 68 60.3
Dinv34453 Davidia involucrata HOM05D001463 ORTHO05D001282 9.1e-11 70.1 72 55.6
Nn2g13529 Nelumbo nucifera HOM05D001463 ORTHO05D001282 9.1e-11 70.1 68 57.4
Duzib170G0250 Durio zibethinus HOM05D001463 ORTHO05D001282 1.2e-10 69.7 64 59.4
TAR636G3077 Trochodendron aralioides HOM05D001463 ORTHO05D001282 1.2e-10 69.7 79 53.2
ECA248G3824 Erigeron canadensis HOM05D001463 ORTHO05D001282 1.6e-10 69.3 72 51.4
Duzib168G0381 Durio zibethinus HOM05D001463 ORTHO05D001282 3.5e-10 68.2 63 61.9
CSS0026065 Camellia sinensis var. sinensis HOM05D001463 ORTHO05D001282 4.5e-10 67.8 72 61.1
Gohir.A07G101300 Gossypium hirsutum HOM05D001463 ORTHO05D001282 7.7e-10 67.0 63 61.9
Peaxi162Scf00481g00623 Petunia axillaris HOM05D001463 ORTHO05D001282 1.0e-09 66.6 73 54.8
GSVIVG01034066001 Vitis vinifera HOM05D001463 ORTHO05D001282 1.0e-09 66.6 73 58.9
Gohir.D07G105300 Gossypium hirsutum HOM05D001463 ORTHO05D001282 1.3e-09 66.2 64 62.5
Thecc.09G312500 Theobroma cacao HOM05D001463 ORTHO05D001282 1.7e-09 65.9 64 59.4
AUR62001723 Chenopodium quinoa HOM05D001463 ORTHO05D001282 5.0e-09 64.3 69 59.4
Dinv35541 Davidia involucrata HOM05D001463 ORTHO05D001282 5.0e-09 64.3 80 51.2
Lsat_1_v5_gn_5_169880 Lactuca sativa HOM05D001463 ORTHO05D001282 5.0e-09 64.3 64 50.0
THA.LOC104827030 Tarenaya hassleriana HOM05D001463 ORTHO05D001282 5.0e-09 64.3 68 51.5
Duzib150G0778 Durio zibethinus HOM05D001463 ORTHO05D001282 6.5e-09 63.9 74 52.7
Duzib093G1451 Durio zibethinus HOM05D001463 ORTHO05D001282 8.5e-09 63.5 63 57.1
Dinv16275 Davidia involucrata HOM05D001463 ORTHO05D001282 1.1e-08 63.2 71 53.5
Thecc.05G028900 Theobroma cacao HOM05D001463 ORTHO05D001282 1.1e-08 63.2 73 54.8
Manes.08G082200 Manihot esculenta HOM05D001463 ORTHO05D001282 1.5e-08 62.8 71 50.7
Dinv37114 Davidia involucrata HOM05D001463 ORTHO05D001282 1.9e-08 62.4 75 54.7
Hma1.2p1_0671F.1_g200570 Hydrangea macrophylla HOM05D001463 ORTHO05D001282 1.9e-08 62.4 71 57.7
Potri.006G092400 Populus trichocarpa HOM05D001463 ORTHO05D001282 2.5e-08 62.0 81 51.9
AUR62020062 Chenopodium quinoa HOM05D001463 ORTHO05D001282 3.2e-08 61.6 69 58.0
Rhsim03G0137600 Rhododendron simsii HOM05D001463 ORTHO05D001282 3.2e-08 61.6 79 50.6
Duzib106G1514 Durio zibethinus HOM05D001463 ORTHO05D001282 4.2e-08 61.2 70 54.3
Gorai.001G113400 Gossypium raimondii HOM05D001463 ORTHO05D001282 4.2e-08 61.2 64 60.9
Glyma.03G073400 Glycine max HOM05D001463 ORTHO05D001282 5.5e-08 60.8 67 56.7
vmacro14565 Vaccinium macrocarpon HOM05D001463 ORTHO05D001282 7.2e-08 60.5 94 41.5
Lj3g0027625 Lotus japonicus HOM05D001463 ORTHO05D001282 9.4e-08 60.1 71 57.7
CSS0026922 Camellia sinensis var. sinensis HOM05D001463 ORTHO05D001282 1.2e-07 59.7 71 54.9
Ciclev10013013m.g Citrus clementina HOM05D001463 ORTHO05D001282 1.6e-07 59.3 73 52.1
Actinidia13817 Actinidia chinensis HOM05D001463 ORTHO05D001282 2.1e-07 58.9 72 55.6
MSTRG.5625 Avicennia marina HOM05D001463 ORTHO05D001282 2.1e-07 58.9 68 51.5
GSVIVG01016436001 Vitis vinifera HOM05D001463 ORTHO05D001282 2.1e-07 58.9 80 51.2
Cfa017303 Carpinus fangiana HOM05D001463 ORTHO05D001282 3.6e-07 58.2 71 52.1
THA.LOC104823267 Tarenaya hassleriana HOM05D001463 ORTHO05D001282 3.6e-07 58.2 66 50.0
Actinidia01131 Actinidia chinensis HOM05D001463 ORTHO05D001282 4.7e-07 57.8 72 52.8
Cc01_g13520 Coffea canephora HOM05D001463 ORTHO05D001282 4.7e-07 57.8 77 49.4
Hund04907 Selenicereus undatus HOM05D001463 ORTHO05D001282 6.1e-07 57.4 66 53.0
Sed0002411 Sechium edule HOM05D001463 ORTHO05D001282 8.0e-07 57.0 63 57.1
Actinidia05333 Actinidia chinensis HOM05D001463 ORTHO05D001282 1.0e-06 56.6 70 50.0
CDE03G0247 Ceratophyllum demersum HOM05D001463 ORTHO05D001282 1.0e-06 56.6 71 42.3
THA.LOC104810744 Tarenaya hassleriana HOM05D001463 ORTHO05D001282 1.0e-06 56.6 60 58.3
Glyma.07G139300 Glycine max HOM05D001463 ORTHO05D001282 1.8e-06 55.8 66 45.5
Haze_20884 Corylus avellana HOM05D001463 ORTHO05D001282 2.3e-06 55.5 63 54.0
Haze_20893 Corylus avellana HOM05D001463 ORTHO05D001282 2.3e-06 55.5 63 54.0
MBI14_g02863_MAGBIO Magnolia biondii HOM05D001463 ORTHO05D001282 2.3e-06 55.5 74 44.6
Thecc.10G031300 Theobroma cacao HOM05D001463 ORTHO05D001282 2.3e-06 55.5 44 59.1
CiPaw.10G149400 Carya illinoinensis HOM05D001463 ORTHO05D001282 3.0e-06 55.1 69 49.3
ClCG03G001170 Citrullus lanatus HOM05D001463 ORTHO05D001282 3.0e-06 55.1 72 51.4
Atru.chr8.2091 Acer truncatum HOM05D001463 ORTHO05D001282 4.0e-06 54.7 71 49.3
CiPaw.09G201400 Carya illinoinensis HOM05D001463 ORTHO05D001282 4.0e-06 54.7 71 50.7
Nn2g11290 Nelumbo nucifera HOM05D001463 ORTHO05D001282 4.0e-06 54.7 72 50.0
Phvul.008G114000 Phaseolus vulgaris HOM05D001463 ORTHO05D001282 4.0e-06 54.7 66 47.0
Aa31LG1G11770 Aethionema arabicum HOM05D001463 ORTHO05D001282 5.2e-06 54.3 47 61.7
Eucgr.K03042 Eucalyptus grandis HOM05D001463 ORTHO05D001282 5.2e-06 54.3 64 48.4
VMungo1383G3326 Vigna mungo HOM05D001463 ORTHO05D001282 5.2e-06 54.3 68 48.5
Actinidia02381 Actinidia chinensis HOM05D001463 ORTHO05D001282 8.8e-06 53.5 67 49.3
arahy.Tifrunner.gnm1.ann1.J6Z8IZ Arachis hypogaea HOM05D001463 ORTHO05D001282 8.8e-06 53.5 45 60.0
Lj1A946T36 Lonicera japonica HOM05D001463 ORTHO05D001282 8.8e-06 53.5 66 50.0


User provided reference genes

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