Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42987 Davidia involucrata HOM05D006297 ORTHO05D007873 3.1e-159 565.1 287 100.0
Dinv17042 Davidia involucrata HOM05D006297 ORTHO05D007873 4.1e-66 255.8 135 92.6
Dinv43112 Davidia involucrata HOM05D006297 ORTHO05D007873 4.1e-66 255.8 135 92.6
Dinv34277 Davidia involucrata HOM05D006297 ORTHO05D007873 1.8e-58 230.3 313 50.2
Dinv17043 Davidia involucrata HOM05D006297 ORTHO05D007873 3.9e-45 186.0 100 98.0
Dinv43111 Davidia involucrata HOM05D006297 ORTHO05D007873 3.9e-45 186.0 100 98.0
CSS0015831 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 1.7e-40 170.6 341 40.8
Actinidia33772 Actinidia chinensis HOM05D006297 ORTHO05D007873 2.2e-40 170.2 345 40.6
Hma1.2p1_0615F.1_g189690 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 2.2e-40 170.2 294 44.6
Rhsim13G0077500 Rhododendron simsii HOM05D000001 ORTHO05D010418 7.2e-39 165.2 335 41.8
QL01p030412 Quercus lobata HOM05D006297 ORTHO05D007873 8.8e-37 158.3 368 37.5
Cfa011548 Carpinus fangiana HOM05D006297 ORTHO05D007873 1.6e-33 147.5 347 37.8
Sabra09G0025100 Salix brachista HOM05D006297 ORTHO05D010418 2.2e-32 143.7 342 36.3
Manes.02G129500 Manihot esculenta HOM05D006297 ORTHO05D007873 2.5e-31 140.2 370 34.6
Haze_24152 Corylus avellana HOM05D006297 ORTHO05D007873 1.0e-29 134.8 366 34.4
Potri.009G035300 Populus trichocarpa HOM05D006297 ORTHO05D007873 1.4e-29 134.4 375 33.6
CiPaw.13G089900 Carya illinoinensis HOM05D006297 ORTHO05D007873 2.0e-28 130.6 359 35.4
CSS0020880 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 3.7e-27 126.3 331 35.0
Eucgr.B02311 Eucalyptus grandis HOM05D006297 ORTHO05D007873 4.8e-27 125.9 361 33.8
TAR369G0304 Trochodendron aralioides HOM05D006297 ORTHO05D007873 8.3e-27 125.2 265 37.4
GSVIVG01031399001 Vitis vinifera HOM05D006297 ORTHO05D007873 1.2e-25 121.3 302 37.1
Migut.D00880 Erythranthe guttata HOM05D006297 ORTHO05D007873 1.3e-24 117.9 381 33.6
TWI79G0566 Tripterygium wilfordii HOM05D000001 ORTHO05D010418 8.6e-24 115.2 342 31.9
Nitab4.5_0023946g0010 Nicotiana tabacum HOM05D006297 ORTHO05D007873 3.3e-23 113.2 370 31.9
COL.COLO4_18571 Corchorus olitorius HOM05D006297 ORTHO05D007873 1.8e-21 107.5 208 39.9
SGA_v2.0_scaffold54G19479 Striga asiatica HOM05D006297 ORTHO05D007873 5.2e-21 105.9 319 33.2
RcHm_v2.0_Chr5g0066301 Rosa chinensis HOM05D006297 ORTHO05D007873 1.7e-19 100.9 152 46.7
MSTRG.18559 Avicennia marina HOM05D006297 ORTHO05D007873 2.2e-19 100.5 407 28.5
Gohir.D07G104500 Gossypium hirsutum HOM05D006297 ORTHO05D007873 2.2e-19 100.5 150 48.7
Ca_20618_v3 Cicer arietinum L. HOM05D006297 ORTHO05D007873 4.9e-19 99.4 425 28.2
CiPaw.14G065800 Carya illinoinensis HOM05D006297 ORTHO05D007873 8.3e-19 98.6 299 34.4
Ciclev10029821m.g Citrus clementina HOM05D006297 ORTHO05D007873 8.3e-19 98.6 333 30.6
Nitab4.5_0006916g0050 Nicotiana tabacum HOM05D006297 ORTHO05D007873 2.4e-18 97.1 418 28.5
Peaxi162Scf00481g00328 Petunia axillaris HOM05D006297 ORTHO05D007873 3.2e-18 96.7 322 32.0
arahy.Tifrunner.gnm1.ann1.FG1CRE Arachis hypogaea HOM05D006297 ORTHO05D007873 5.4e-18 95.9 122 54.1
arahy.Tifrunner.gnm1.ann1.NT76K4 Arachis hypogaea HOM05D006297 ORTHO05D007873 5.4e-18 95.9 122 54.1
FAN11G1892 Fragaria x ananassa HOM05D006297 ORTHO05D007873 5.9e-17 92.4 167 44.3
AUR62001745 Chenopodium quinoa HOM05D006297 ORTHO05D007873 1.7e-16 90.9 236 34.7
Duzib168G2114 Durio zibethinus HOM05D006297 ORTHO05D007873 1.7e-16 90.9 305 30.8
FvH4_3g36910 Fragaria vesca HOM05D006297 ORTHO05D007873 2.3e-16 90.5 167 43.7
PGR119G2469 Punica granatum HOM05D006297 ORTHO05D007873 2.3e-16 90.5 214 37.9
Sc12g0001260 Simmondsia chinensis HOM05D006297 ORTHO05D007873 2.3e-16 90.5 98 58.2
FAN16G1466 Fragaria x ananassa HOM05D006297 ORTHO05D007873 2.9e-16 90.1 152 43.4
Nn2g13426 Nelumbo nucifera HOM05D006297 ORTHO05D007873 2.9e-16 90.1 432 26.4
FAN25G2608 Fragaria x ananassa HOM05D006297 ORTHO05D007873 8.6e-16 88.6 152 44.1
AUR62020026 Chenopodium quinoa HOM05D006297 ORTHO05D007873 2.5e-15 87.0 234 32.5
Thecc.09G316300 Theobroma cacao HOM05D006297 ORTHO05D007873 3.3e-15 86.7 340 30.3
Cc01_g13310 Coffea canephora HOM05D006297 ORTHO05D007873 5.6e-15 85.9 391 28.1
FAN21G2693 Fragaria x ananassa HOM05D006297 ORTHO05D007873 5.6e-15 85.9 125 48.0
CsaV3_1G034520 Cucumis sativus L. HOM05D006297 ORTHO05D007873 7.3e-15 85.5 342 29.5
Duzib170G0989 Durio zibethinus HOM05D006297 ORTHO05D007873 7.3e-15 85.5 199 38.2
Potri.001G243900 Populus trichocarpa HOM05D006297 ORTHO05D007873 7.3e-15 85.5 421 26.1
Lj3g0014453 Lotus japonicus HOM05D006297 ORTHO05D007873 9.5e-15 85.1 115 51.3
Lalb_Chr22g0352441 Lupinus albus HOM05D006297 ORTHO05D007873 9.5e-15 85.1 345 29.6
CAN.G394.75 Capsicum annuum HOM05D006297 ORTHO05D007873 6.1e-14 82.4 330 30.3
MD11G1095400 Malus domestica HOM05D006297 ORTHO05D007873 6.1e-14 82.4 130 47.7
Solyc06g076370.4 Solanum lycopersicum HOM05D006297 ORTHO05D007873 1.0e-13 81.6 330 29.1
CANSAT54G0582 Cannabis sativa HOM05D006297 ORTHO05D007873 1.4e-13 81.3 437 26.1
Prupe.6G070900 Prunus persica HOM05D006297 ORTHO05D007873 5.2e-13 79.3 135 46.7
Ah.08g219890 Amaranthus hybridus HOM05D006297 ORTHO05D007873 3.4e-12 76.6 95 53.7
Medtr4g064830 Medicago truncatula HOM05D006297 ORTHO05D007873 3.4e-12 76.6 119 47.1
ClCG03G001300 Citrullus lanatus HOM05D006297 ORTHO05D007873 4.4e-12 76.3 352 28.1
Sopen06g032780 Solanum pennellii HOM05D006297 ORTHO05D007873 4.4e-12 76.3 331 29.3
MELO3C020609.2 Cucumis melo HOM05D006297 ORTHO05D007873 5.8e-12 75.9 349 27.8
Psat7g210960 Pisum sativum HOM05D006297 ORTHO05D007873 7.5e-12 75.5 138 41.3
PSO339G0783 Papaver somniferum HOM05D006297 ORTHO05D007873 2.2e-11 73.9 132 43.2
Glyma.11G136300 Glycine max HOM05D006297 ORTHO05D007873 2.9e-11 73.6 130 45.4
PSO513G0159 Papaver somniferum HOM05D006297 ORTHO05D007873 1.1e-10 71.6 132 42.4
TPR.G23574 Trifolium pratense HOM05D006297 ORTHO05D007873 1.4e-10 71.2 88 48.9
Lalb_Chr03g0026471 Lupinus albus HOM05D006297 ORTHO05D007873 4.1e-10 69.7 80 57.5
DCAR_007431 Daucus carota HOM05D006297 ORTHO05D000003 7.0e-10 68.9 357 26.1
SalBow1G2607 Salvia bowleyana HOM05D006297 ORTHO05D007873 7.0e-10 68.9 91 49.5
SalBow6G6944 Salvia bowleyana HOM05D006297 ORTHO05D007873 7.0e-10 68.9 91 49.5
Aqoxy1G00878 Aquilegia oxysepala HOM05D006297 ORTHO05D007873 2.7e-09 67.0 401 26.2
Sed0011562 Sechium edule HOM05D006297 ORTHO05D007873 2.7e-09 67.0 333 24.9
Phvul.011G061900 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 3.5e-09 66.6 150 38.0
Lalb_Chr01g0003491 Lupinus albus HOM05D006297 ORTHO05D007873 4.6e-09 66.2 85 50.6
VMungo1127G1804 Vigna mungo HOM05D006297 ORTHO05D007873 7.8e-09 65.5 149 37.6
Lsat_1_v5_gn_8_72960 Lactuca sativa HOM05D006297 ORTHO05D007873 1.3e-08 64.7 301 25.9
arahy.Tifrunner.gnm1.ann1.19P32Y Arachis hypogaea HOM05D006297 ORTHO05D007873 2.3e-08 63.9 241 31.1
EL10Ac7g16061 Beta vulgaris HOM05D006297 ORTHO05D007873 3.0e-08 63.5 122 42.6
HanXRQChr05g0135261 Helianthus annuus HOM05D006297 ORTHO05D007873 5.0e-08 62.8 274 27.0
Hund04923 Selenicereus undatus HOM05D006297 ORTHO05D007873 6.6e-08 62.4 120 40.0
Nn2g11187 Nelumbo nucifera HOM05D006297 ORTHO05D007873 1.1e-07 61.6 232 29.7
Aa31LG4G15680 Aethionema arabicum HOM05D006297 ORTHO05D007873 1.5e-07 61.2 104 43.3
Glyma.12G060000 Glycine max HOM05D006297 ORTHO05D007873 1.5e-07 61.2 288 29.9
ATR0559G346 Amborella trichopoda HOM05D006297 ORTHO05D007873 2.5e-07 60.5 79 51.9
THA.LOC104799430 Tarenaya hassleriana HOM05D006297 ORTHO05D007873 7.3e-07 58.9 108 44.4
A06p20810 Brassica napus HOM05D006297 ORTHO05D007873 9.5e-07 58.5 125 36.8
Sp5g14970 Schrenkiella parvula HOM05D006297 ORTHO05D007873 1.2e-06 58.2 129 37.2
BcaC09g49771 Brassica carinata HOM05D006297 ORTHO05D007873 2.1e-06 57.4 125 36.8
A01p26050 Brassica napus HOM05D006297 ORTHO05D007873 2.1e-06 57.4 125 37.6
BraA01t02522Z Brassica rapa HOM05D006297 ORTHO05D007873 2.1e-06 57.4 125 37.6
PGSC0003DMG400030329 Solanum tuberosum HOM05D006297 ORTHO05D007873 4.7e-06 56.2 207 30.0
Thhalv10002567m.g Eutrema salsugineum HOM05D006297 ORTHO05D007873 6.2e-06 55.8 100 40.0
MBI14_g08019_MAGBIO Magnolia biondii HOM05D006297 ORTHO05D007873 6.2e-06 55.8 204 29.4
Sabra16G0148100 Salix brachista HOM05D000026 ORTHO05D000094 8.0e-06 55.5 109 42.2


User provided reference genes

Program Settings