Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv16997 Davidia involucrata HOM05D015424 ORTHO05D019070 2.4e-90 335.5 172 100.0
Dinv42946 Davidia involucrata HOM05D015424 ORTHO05D019070 2.4e-90 335.5 172 100.0
Dinv43154 Davidia involucrata HOM05D015424 ORTHO05D019070 1.3e-88 329.7 169 100.0
Dinv19505 Davidia involucrata HOM05D000290 ORTHO05D002418 1.9e-39 166.4 98 89.8
Dinv00761 Davidia involucrata HOM05D015424 ORTHO05D019070 3.1e-29 132.5 65 95.4
Dinv42708 Davidia involucrata HOM05D000290 ORTHO05D002418 3.2e-26 122.5 101 68.3
CSS0019128 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D002418 1.6e-25 120.2 100 64.0
Actinidia33364 Actinidia chinensis HOM05D000290 ORTHO05D002418 4.8e-22 108.6 99 61.6
MD01G1017900 Malus domestica HOM05D000290 ORTHO05D002418 1.8e-21 106.7 108 51.9
MELO3C007801.2 Cucumis melo HOM05D000290 ORTHO05D002418 2.6e-20 102.8 114 50.0
CsaV3_6G045940 Cucumis sativus L. HOM05D000290 ORTHO05D002418 2.6e-20 102.8 114 50.0
ClCG01G019260 Citrullus lanatus HOM05D000290 ORTHO05D002418 1.7e-19 100.1 123 47.2
vmacro18626 Vaccinium macrocarpon HOM05D000290 ORTHO05D002418 8.5e-19 97.8 102 57.8
GSVIVG01022210001 Vitis vinifera HOM05D000290 ORTHO05D002418 2.1e-17 93.2 115 54.8
Sed0011702 Sechium edule HOM05D000290 ORTHO05D002418 2.7e-17 92.8 126 49.2
Thecc.01G110800 Theobroma cacao HOM05D000290 ORTHO05D002418 7.9e-17 91.3 137 46.7
Rhsim08G0007800 Rhododendron simsii HOM05D000290 ORTHO05D002418 8.8e-16 87.8 100 56.0
TWI77G0161 Tripterygium wilfordii HOM05D000290 ORTHO05D002418 1.1e-15 87.4 105 47.6
Gohir.A02G133800 Gossypium hirsutum HOM05D000290 ORTHO05D002418 9.7e-15 84.3 137 46.7
TWI74G1368 Tripterygium wilfordii HOM05D000290 ORTHO05D002418 1.3e-14 84.0 103 45.6
ATR0564G333 Amborella trichopoda HOM05D000290 ORTHO05D002418 2.2e-14 83.2 96 55.2
RcHm_v2.0_Chr2g0116161 Rosa chinensis HOM05D000290 ORTHO05D002418 3.7e-14 82.4 99 50.5
Duzib147G0442 Durio zibethinus HOM05D000290 ORTHO05D002418 1.4e-13 80.5 135 43.0
Glyma.08G140900 Glycine max HOM05D000290 ORTHO05D002418 1.4e-13 80.5 101 47.5
Manes.12G141200 Manihot esculenta HOM05D000290 ORTHO05D002418 1.4e-13 80.5 103 49.5
Sopen04g023660 Solanum pennellii HOM05D000290 ORTHO05D002418 1.8e-13 80.1 111 48.6
Prupe.6G175300 Prunus persica HOM05D000290 ORTHO05D002418 3.1e-13 79.3 113 42.5
Gorai.003G046300 Gossypium raimondii HOM05D000290 ORTHO05D002418 4.1e-13 79.0 138 45.7
TAR628G0248 Trochodendron aralioides HOM05D000290 ORTHO05D002418 5.3e-13 78.6 96 50.0
Haze_25028 Corylus avellana HOM05D000290 ORTHO05D002418 6.9e-13 78.2 120 44.2
Cpa.g.sc100.6 Carica papaya HOM05D000290 ORTHO05D026430 9.1e-13 77.8 115 43.5
Ciclev10024947m.g Citrus clementina HOM05D000290 ORTHO05D002418 1.2e-12 77.4 102 45.1
Potri.007G082500 Populus trichocarpa HOM05D000290 ORTHO05D002418 2.6e-12 76.3 101 46.5
CANSAT01G1322 Cannabis sativa HOM05D000290 ORTHO05D002418 4.5e-12 75.5 113 42.5
Solyc04g054190.3 Solanum lycopersicum HOM05D000290 ORTHO05D002418 5.9e-12 75.1 111 47.7
Haze_20641 Corylus avellana HOM05D015424 ORTHO05D019070 1.0e-11 74.3 88 47.7
HanXRQChr14g0446221 Helianthus annuus HOM05D000290 ORTHO05D002418 1.0e-11 74.3 121 45.5
Phvul.009G140366 Phaseolus vulgaris HOM05D000290 ORTHO05D002418 1.0e-11 74.3 103 45.6
CiPaw.04G092900 Carya illinoinensis HOM05D000290 ORTHO05D002418 1.3e-11 73.9 118 41.5
Haze_00405 Corylus avellana HOM05D015424 ORTHO05D019070 1.7e-11 73.6 89 47.2
Nn5g28931 Nelumbo nucifera HOM05D000290 ORTHO05D002418 3.8e-11 72.4 97 48.5
PGR004G2785 Punica granatum HOM05D000290 ORTHO05D002418 6.5e-11 71.6 111 40.5
arahy.Tifrunner.gnm1.ann1.S3R8GT Arachis hypogaea HOM05D000290 ORTHO05D002418 8.5e-11 71.2 97 46.4
arahy.Tifrunner.gnm1.ann1.T0HPDF Arachis hypogaea HOM05D000290 ORTHO05D002418 8.5e-11 71.2 96 46.9
Sabra05G0068300 Salix brachista HOM05D000290 ORTHO05D002418 8.5e-11 71.2 103 46.6
Atru.chr4.398 Acer truncatum HOM05D000290 ORTHO05D002418 1.4e-10 70.5 89 47.2
Ca_17701_v3 Cicer arietinum L. HOM05D000290 ORTHO05D002418 1.4e-10 70.5 79 49.4
MD15G1334400 Malus domestica HOM05D000290 ORTHO05D002418 1.4e-10 70.5 102 42.2
Nitab4.5_0000156g0150 Nicotiana tabacum HOM05D000290 ORTHO05D002418 1.4e-10 70.5 107 49.5
Oeu041166.1 Olea europaea HOM05D015424 ORTHO05D019070 2.5e-10 69.7 98 46.9
Haze_10791 Corylus avellana HOM05D015424 ORTHO05D019070 3.2e-10 69.3 89 46.1
Glyma.06G145700 Glycine max HOM05D000290 ORTHO05D002418 4.2e-10 68.9 103 44.7
Medtr3g094740 Medicago truncatula HOM05D000290 ORTHO05D002418 7.2e-10 68.2 100 43.0
MSTRG.3805 Avicennia marina HOM05D000290 ORTHO05D002418 9.4e-10 67.8 102 52.0
Nitab4.5_0004814g0010 Nicotiana tabacum HOM05D000290 ORTHO05D002418 9.4e-10 67.8 109 45.0
Phvul.002G264200 Phaseolus vulgaris HOM05D000290 ORTHO05D002418 1.2e-09 67.4 104 44.2
Sabra07G0069100 Salix brachista HOM05D000290 ORTHO05D002418 1.2e-09 67.4 102 47.1
CDE05G2915 Ceratophyllum demersum HOM05D000290 ORTHO05D002418 2.1e-09 66.6 96 43.8
CiPaw.03G135100 Carya illinoinensis HOM05D000290 ORTHO05D002418 2.7e-09 66.2 104 42.3
unitig_0.g1736 Utricularia gibba HOM05D000290 ORTHO05D002418 4.7e-09 65.5 114 43.9
QL06p032420 Quercus lobata HOM05D000290 ORTHO05D002418 6.1e-09 65.1 99 46.5
Hund03547 Selenicereus undatus HOM05D000290 ORTHO05D002418 8.0e-09 64.7 95 43.2
FAN26G1302 Fragaria x ananassa HOM05D000290 ORTHO05D002418 1.0e-08 64.3 99 42.4
VMungo0251G3264 Vigna mungo HOM05D000290 ORTHO05D002418 1.0e-08 64.3 106 41.5
EL10Ac6g14732 Beta vulgaris HOM05D000290 ORTHO05D002418 1.8e-08 63.5 98 40.8
CAN.G267.22 Capsicum annuum HOM05D000290 ORTHO05D002418 1.8e-08 63.5 112 45.5
FAN23G0918 Fragaria x ananassa HOM05D000290 ORTHO05D002418 1.8e-08 63.5 98 41.8
FAN28G0415 Fragaria x ananassa HOM05D000290 ORTHO05D002418 1.8e-08 63.5 99 41.4
Gohir.D03G045200 Gossypium hirsutum HOM05D000290 ORTHO05D002418 2.3e-08 63.2 135 40.7
SalBow6G0294 Salvia bowleyana HOM05D000290 ORTHO05D002418 2.3e-08 63.2 117 42.7
SGA_v2.0_scaffold47G17723 Striga asiatica HOM05D000290 ORTHO05D002418 3.0e-08 62.8 89 48.3
CDE05G1393 Ceratophyllum demersum HOM05D001902 ORTHO05D002418 3.9e-08 62.4 102 40.2
Hma1.2p1_0070F.1_g037540 Hydrangea macrophylla HOM05D000290 ORTHO05D002418 6.7e-08 61.6 146 39.7
Glyma.04G220200 Glycine max HOM05D000290 ORTHO05D002418 1.1e-07 60.8 104 42.3
Lalb_Chr12g0203571 Lupinus albus HOM05D000290 ORTHO05D002418 1.1e-07 60.8 106 38.7
Aa31LG1G17030 Aethionema arabicum HOM05D000290 ORTHO05D002418 2.6e-07 59.7 97 43.3
Eucgr.H04831 Eucalyptus grandis HOM05D000290 ORTHO05D002418 3.3e-07 59.3 109 40.4
Potri.005G083200 Populus trichocarpa HOM05D000290 ORTHO05D002418 4.4e-07 58.9 101 42.6
Sc16g0004190 Simmondsia chinensis HOM05D000290 ORTHO05D002418 4.4e-07 58.9 91 44.0
THA.LOC104799212 Tarenaya hassleriana HOM05D000290 ORTHO05D002418 5.7e-07 58.5 107 41.1
SalBow6G4085 Salvia bowleyana HOM05D000290 ORTHO05D002418 1.7e-06 57.0 106 39.6
HPP92_027145 Vanilla planifolia HOM05D000290 ORTHO05D002418 2.2e-06 56.6 106 37.7
HanXRQChr15g0471941 Helianthus annuus HOM05D000290 ORTHO05D002418 2.8e-06 56.2 114 39.5
Lalb_Chr13g0296171 Lupinus albus HOM05D000290 ORTHO05D002418 3.7e-06 55.8 103 37.9
Oeu028382.3 Olea europaea HOM05D000290 ORTHO05D002418 4.8e-06 55.5 104 39.4
Actinidia28888 Actinidia chinensis HOM05D000290 ORTHO05D026430 6.3e-06 55.1 41 68.3


User provided reference genes

Program Settings