Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42911 Davidia involucrata HOM05D004574 ORTHO05D005612 1.8e-282 975.3 521 100.0
Dinv43190 Davidia involucrata HOM05D004574 ORTHO05D005612 1.8e-282 975.3 521 100.0
CSS0049430 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 9.6e-175 617.5 516 71.5
Actinidia04251 Actinidia chinensis HOM05D004574 ORTHO05D005612 1.3e-158 563.9 512 62.5
Actinidia21909 Actinidia chinensis HOM05D004574 ORTHO05D005612 1.7e-150 537.0 514 63.6
vmacro21880 Vaccinium macrocarpon HOM05D004574 ORTHO05D005612 1.3e-147 527.3 516 62.6
CSS0028433 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 2.2e-142 510.0 516 61.2
Hma1.2p1_0182F.1_g080580 Hydrangea macrophylla HOM05D004574 ORTHO05D005612 2.7e-137 493.0 449 66.1
Haze_19313 Corylus avellana HOM05D004574 ORTHO05D005612 1.9e-130 470.3 493 58.4
CSS0003558 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 1.0e-128 464.5 420 68.8
TWI34G0786 Tripterygium wilfordii HOM05D004574 ORTHO05D005612 1.0e-128 464.5 510 54.9
CiPaw.16G117400 Carya illinoinensis HOM05D004574 ORTHO05D005612 5.2e-128 462.2 500 56.8
Prupe.7G253700 Prunus persica HOM05D004574 ORTHO05D005612 2.6e-127 459.9 492 58.3
Lj9A709T23 Lonicera japonica HOM05D004574 ORTHO05D005612 3.4e-127 459.5 420 63.8
Duzib168G1873 Durio zibethinus HOM05D004574 ORTHO05D005612 1.3e-126 457.6 515 54.4
Oeu040778.1 Olea europaea HOM05D004574 ORTHO05D005612 4.8e-126 455.7 587 49.6
Cc06_g07390 Coffea canephora HOM05D004574 ORTHO05D005612 9.1e-125 451.4 531 55.9
Ciclev10007567m.g Citrus clementina HOM05D004574 ORTHO05D005612 2.1e-121 440.3 490 54.7
FvH4_1g01590 Fragaria vesca HOM05D004574 ORTHO05D005612 6.1e-121 438.7 490 54.3
Manes.14G139500 Manihot esculenta HOM05D004574 ORTHO05D005612 8.0e-121 438.3 494 55.7
CAN.G518.8 Capsicum annuum HOM05D004574 ORTHO05D005612 3.0e-120 436.4 540 53.0
QL02p091406 Quercus lobata HOM05D004574 ORTHO05D005612 4.0e-120 436.0 505 56.8
Duzib187G1624 Durio zibethinus HOM05D004574 ORTHO05D005612 5.2e-120 435.6 509 52.5
Gohir.A06G049000 Gossypium hirsutum HOM05D004574 ORTHO05D005612 6.8e-120 435.3 494 54.0
RcHm_v2.0_Chr2g0086551 Rosa chinensis HOM05D004574 ORTHO05D005612 4.4e-119 432.6 497 53.1
Thecc.09G142400 Theobroma cacao HOM05D004574 ORTHO05D005612 1.3e-118 431.0 516 51.0
FAN26G2227 Fragaria x ananassa HOM05D004574 ORTHO05D005612 3.7e-118 429.5 489 53.6
FAN28G2389 Fragaria x ananassa HOM05D004574 ORTHO05D005612 8.3e-118 428.3 490 53.5
Cfa020884 Carpinus fangiana HOM05D004574 ORTHO05D005612 1.1e-117 427.9 494 54.5
Peaxi162Scf00347g00125 Petunia axillaris HOM05D004574 ORTHO05D005612 3.2e-117 426.4 534 53.2
Atru.chr7.229_Atru.chr7.228 Acer truncatum HOM05D004574 ORTHO05D005612 5.4e-117 425.6 515 49.9
GSVIVG01012900001 Vitis vinifera HOM05D004574 ORTHO05D005612 4.5e-116 422.5 528 51.1
Gorai.010G054900 Gossypium raimondii HOM05D004574 ORTHO05D005612 1.3e-115 421.0 507 51.5
Nitab4.5_0001671g0130 Nicotiana tabacum HOM05D004574 ORTHO05D005612 3.9e-115 419.5 539 51.2
MD15G1158500 Malus domestica HOM05D004574 ORTHO05D005612 6.6e-115 418.7 492 53.0
Nitab4.5_0001151g0100 Nicotiana tabacum HOM05D004574 ORTHO05D005612 1.1e-114 417.9 540 51.9
FAN19G2203 Fragaria x ananassa HOM05D004574 ORTHO05D005612 1.9e-114 417.2 531 50.1
MD02G1012700 Malus domestica HOM05D004574 ORTHO05D005612 1.9e-114 417.2 491 53.8
Gohir.D06G048700 Gossypium hirsutum HOM05D004574 ORTHO05D005612 2.5e-114 416.8 498 52.2
Potri.018G113600 Populus trichocarpa HOM05D004574 ORTHO05D005612 1.6e-113 414.1 498 51.6
Migut.J01279 Erythranthe guttata HOM05D004574 ORTHO05D005612 3.6e-113 412.9 528 48.7
Sopen07g003110 Solanum pennellii HOM05D004574 ORTHO05D005612 1.8e-112 410.6 543 50.1
Solyc07g007040.4 Solanum lycopersicum HOM05D004574 ORTHO05D005612 6.8e-112 408.7 543 51.2
MSTRG.19628 Avicennia marina HOM05D004574 ORTHO05D005612 2.6e-111 406.8 525 51.0
PGR102G2914 Punica granatum HOM05D004574 ORTHO05D005612 2.6e-111 406.8 506 53.4
CANSAT11G2415 Cannabis sativa HOM05D004574 ORTHO05D005612 9.8e-111 404.8 490 52.9
Sabra18G0096500 Salix brachista HOM05D004574 ORTHO05D005612 1.7e-110 404.1 494 54.5
DCAR_017762 Daucus carota HOM05D004574 ORTHO05D005612 2.2e-110 403.7 419 60.6
Nn2g12259 Nelumbo nucifera HOM05D004574 ORTHO05D005612 2.3e-104 383.6 524 48.1
SGA_v2.0_scaffold229G43349 Striga asiatica HOM05D004574 ORTHO05D005612 2.3e-104 383.6 524 50.2
Eucgr.C04065 Eucalyptus grandis HOM05D004574 ORTHO05D005612 8.9e-104 381.7 500 51.4
FAN23G1466 Fragaria x ananassa HOM05D004574 ORTHO05D005612 8.9e-104 381.7 492 49.2
Glyma.13G156900 Glycine max HOM05D004574 ORTHO05D005612 8.9e-104 381.7 521 47.4
Sc18g0000060 Simmondsia chinensis HOM05D004574 ORTHO05D005612 5.8e-103 379.0 502 47.6
ClCG06G012070 Citrullus lanatus HOM05D004574 ORTHO05D005612 9.8e-103 378.3 544 48.7
THA.LOC104815398 Tarenaya hassleriana HOM05D004574 ORTHO05D005612 4.9e-102 375.9 513 48.3
Lalb_Chr12g0198521 Lupinus albus HOM05D004574 ORTHO05D005612 1.7e-99 367.5 515 49.3
MELO3C010260.2 Cucumis melo HOM05D004574 ORTHO05D005612 3.9e-99 366.3 528 47.2
Sed0008757 Sechium edule HOM05D004574 ORTHO05D005612 8.6e-99 365.2 529 47.6
ECA236G2347 Erigeron canadensis HOM05D004574 ORTHO05D005612 3.3e-98 363.2 558 44.3
Lj4g0023014 Lotus japonicus HOM05D004574 ORTHO05D005612 7.3e-98 362.1 514 46.9
MBI14_g15649_MAGBIO Magnolia biondii HOM05D004574 ORTHO05D005612 2.8e-97 360.1 515 50.3
Medtr4g116570 Medicago truncatula HOM05D004574 ORTHO05D005612 4.7e-97 359.4 504 49.6
Potri.006G189501 Populus trichocarpa HOM05D004574 ORTHO05D005612 6.8e-96 355.5 503 46.5
arahy.Tifrunner.gnm1.ann1.J06XH2 Arachis hypogaea HOM05D004574 ORTHO05D005612 1.2e-95 354.8 502 48.6
arahy.Tifrunner.gnm1.ann1.YXSX85 Arachis hypogaea HOM05D004574 ORTHO05D005612 1.2e-95 354.8 519 47.2
Sed0022583 Sechium edule HOM05D004574 ORTHO05D005612 1.5e-95 354.4 538 46.5
Hund14397 Selenicereus undatus HOM05D004574 ORTHO05D005612 4.4e-95 352.8 552 46.4
Cpa.g.sc46.91 Carica papaya HOM05D004574 ORTHO05D005612 9.9e-95 351.7 540 44.3
Aqoxy7G03519 Aquilegia oxysepala HOM05D004574 ORTHO05D005612 1.3e-94 351.3 536 48.7
TPR.G15786 Trifolium pratense HOM05D004574 ORTHO05D005612 2.2e-94 350.5 502 49.0
Lsat_1_v5_gn_8_60221 Lactuca sativa HOM05D004574 ORTHO05D005612 4.9e-94 349.4 533 48.4
CsaV3_1G028540 Cucumis sativus L. HOM05D004574 ORTHO05D005612 1.1e-93 348.2 546 44.9
Nn8g39728 Nelumbo nucifera HOM05D004574 ORTHO05D005612 9.2e-93 345.1 533 43.9
Glyma.17G104500 Glycine max HOM05D004574 ORTHO05D005612 1.6e-92 344.4 412 49.5
Lalb_Chr07g0179541 Lupinus albus HOM05D004574 ORTHO05D005612 6.6e-91 339.0 520 43.8
VMungo1215G1939 Vigna mungo HOM05D004574 ORTHO05D005612 1.8e-88 330.9 532 44.5
AT3G09850 Arabidopsis thaliana HOM05D004574 ORTHO05D005612 1.2e-87 328.2 509 44.4
Phvul.003G175300 Phaseolus vulgaris HOM05D004574 ORTHO05D005612 1.2e-87 328.2 505 47.1
Psat4g033240 Pisum sativum HOM05D004574 ORTHO05D005612 3.8e-86 323.2 400 49.5
Carub.0003s0894 Capsella rubella HOM05D004574 ORTHO05D005612 1.1e-85 321.6 494 47.0
Ah.09g223910 Amaranthus hybridus HOM05D004574 ORTHO05D005612 1.9e-85 320.9 580 40.9
AL3G21080 Arabidopsis lyrata HOM05D004574 ORTHO05D005612 5.4e-85 319.3 496 46.4
Ca_21611_v3 Cicer arietinum L. HOM05D004574 ORTHO05D005612 5.4e-85 319.3 473 45.2
CARHR084360 Cardamine hirsuta HOM05D004574 ORTHO05D005612 7.1e-85 318.9 543 43.5
Thhalv10020109m.g Eutrema salsugineum HOM05D004574 ORTHO05D005612 7.1e-85 318.9 500 44.4
ECA234G1322 Erigeron canadensis HOM05D004574 ORTHO05D005612 2.7e-84 317.0 515 47.0
Sp3g08180 Schrenkiella parvula HOM05D004574 ORTHO05D005612 1.7e-83 314.3 504 45.6
HanXRQChr05g0139651 Helianthus annuus HOM05D004574 ORTHO05D005612 1.1e-82 311.6 386 51.3
AUR62011249 Chenopodium quinoa HOM05D004574 ORTHO05D005612 1.5e-82 311.2 553 43.2
PSO170G6219 Papaver somniferum HOM05D004574 ORTHO05D005612 1.3e-81 308.1 554 41.3
AUR62041455 Chenopodium quinoa HOM05D004574 ORTHO05D005612 6.2e-81 305.8 531 40.1
DCAR_014931 Daucus carota HOM05D004574 ORTHO05D005612 9.0e-80 302.0 405 52.8
EL10Ac8g18810 Beta vulgaris HOM05D004574 ORTHO05D005612 1.5e-79 301.2 574 41.8
Hma1.2p1_2402F.1_g321400 Hydrangea macrophylla HOM05D004574 ORTHO05D005612 1.3e-78 298.1 354 52.0
Sabra06G0145700 Salix brachista HOM05D004574 ORTHO05D005612 7.1e-77 292.4 398 48.2
Aa31LG3G2320 Aethionema arabicum HOM05D004574 ORTHO05D005612 3.5e-76 290.0 522 44.1
Lsat_1_v5_gn_5_90461 Lactuca sativa HOM05D004574 ORTHO05D005612 2.3e-75 287.3 539 40.6
HanXRQChr12g0357011 Helianthus annuus HOM05D004574 ORTHO05D005612 9.6e-74 282.0 510 45.7
BcaC05g29496 Brassica carinata HOM05D004574 ORTHO05D005612 1.3e-70 271.6 497 44.3
C05p58250 Brassica napus HOM05D004574 ORTHO05D005612 1.3e-70 271.6 497 44.3
TAR625G0795 Trochodendron aralioides HOM05D004574 ORTHO05D005612 1.3e-70 271.6 389 47.0
A05p39200 Brassica napus HOM05D004574 ORTHO05D005612 4.9e-70 269.6 496 43.1
COL.COLO4_24086 Corchorus olitorius HOM05D004574 ORTHO05D005612 1.1e-69 268.5 370 48.1
BolC5t34479H Brassica oleracea HOM05D004574 ORTHO05D005612 2.4e-69 267.3 506 42.1
BraA05t22709Z Brassica rapa HOM05D004574 ORTHO05D005612 4.2e-69 266.5 494 43.5
BcaC05g29707 Brassica carinata HOM05D004574 ORTHO05D005612 4.3e-66 256.5 523 40.0
Eucgr.L01317 Eucalyptus grandis HOM05D004574 ORTHO05D005612 3.8e-62 243.4 374 47.3
ATR0629G131 Amborella trichopoda HOM05D004574 ORTHO05D005612 9.0e-56 222.2 586 35.8
CDE05G2637 Ceratophyllum demersum HOM05D004574 ORTHO05D005612 2.6e-55 220.7 459 41.0
Eucgr.L02934 Eucalyptus grandis HOM05D004574 ORTHO05D005612 1.4e-53 214.9 369 45.0
SHI03239 Sapria himalayana HOM05D004574 ORTHO05D005612 7.2e-53 212.6 378 40.5
HPP92_005340 Vanilla planifolia HOM05D004574 ORTHO05D005612 8.7e-51 205.7 474 36.3
Os08g0288500 Oryza sativa ssp. japonica HOM05D004574 ORTHO05D005612 3.2e-45 187.2 315 45.4
Zm00001eb028250 Zea mays HOM05D004574 ORTHO05D005612 2.3e-43 181.0 356 36.0
SEGI_33529 Sequoiadendron giganteum HOM05D004574 ORTHO05D005612 6.7e-43 179.5 616 30.5
unitig_0.g517 Utricularia gibba HOM05D004574 ORTHO05D005612 4.1e-40 170.2 379 37.2
TAR625G1332 Trochodendron aralioides HOM05D004574 ORTHO05D005612 1.1e-37 162.2 96 84.4
Hma1.2p1_1784F.1_g302190 Hydrangea macrophylla HOM05D004574 ORTHO05D005612 3.8e-30 137.1 96 72.9
SEGI_00197 Sequoiadendron giganteum HOM05D000238 ORTHO05D001889 1.9e-29 134.8 436 30.7
Pp3c15_19210 Physcomitrium patens HOM05D004574 ORTHO05D005612 3.5e-23 114.0 124 47.6
Pp3c15_19211 Physcomitrium patens HOM05D004574 ORTHO05D005612 3.5e-23 114.0 124 47.6
Phvul.003G175200 Phaseolus vulgaris HOM05D004574 ORTHO05D005612 7.7e-23 112.8 233 36.1
Actinidia38356 Actinidia chinensis HOM05D004574 ORTHO05D005612 2.2e-22 111.3 93 65.6
Mapoly0074s0045 Marchantia polymorpha HOM05D004574 ORTHO05D005612 4.4e-18 97.1 349 30.7
COL.COLO4_24085 Corchorus olitorius HOM05D004574 ORTHO05D005612 9.8e-18 95.9 95 58.9
Eucgr.L02096 Eucalyptus grandis HOM05D004574 ORTHO05D005612 5.5e-13 80.1 48 79.2
BolC1t05428H Brassica oleracea HOM05D004574 ORTHO05D005612 8.8e-11 72.8 181 37.6
AagrBONN_evm.TU.Sc2ySwM_340.493 Anthoceros agrestis HOM05D004574 ORTHO05D005612 4.4e-10 70.5 85 44.7
Oeu028749.1 Olea europaea HOM05D004574 ORTHO05D005612 1.8e-08 65.1 83 53.0
Cre09.g388986 Chlamydomonas reinhardtii HOM05D004574 ORTHO05D005612 2.7e-07 61.2 120 34.2
SHI03242 Sapria himalayana HOM05D004574 ORTHO05D005612 8.6e-06 56.2 41 65.9
VMungo0251G0925 Vigna mungo HOM05D005045 ORTHO05D005612 8.6e-06 56.2 117 29.9


User provided reference genes

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