Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42873 Davidia involucrata HOM05D006119 ORTHO05D007641 5.5e-68 260.8 125 100.0
Dinv43227 Davidia involucrata HOM05D006119 ORTHO05D007641 1.1e-52 209.9 101 99.0
Hma1.2p1_0028F.1_g017420 Hydrangea macrophylla HOM05D006119 ORTHO05D007641 3.8e-45 184.9 100 88.0
CSS0002774 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 1.1e-44 183.3 100 86.0
CSS0027400 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 1.1e-44 183.3 100 86.0
Lsat_1_v5_gn_5_91501 Lactuca sativa HOM05D006119 ORTHO05D007641 3.2e-44 181.8 100 85.0
Peaxi162Scf00062g00419 Petunia axillaris HOM05D006119 ORTHO05D007641 1.6e-43 179.5 101 82.2
GSVIVG01023584001 Vitis vinifera HOM05D006119 ORTHO05D007641 1.6e-43 179.5 101 83.2
PGSC0003DMG400007897 Solanum tuberosum HOM05D006119 ORTHO05D007641 2.1e-43 179.1 101 82.2
Actinidia04288 Actinidia chinensis HOM05D006119 ORTHO05D007641 2.7e-43 178.7 101 84.2
SGA_v2.0_scaffold206G41813 Striga asiatica HOM05D006119 ORTHO05D007641 4.7e-43 177.9 100 84.0
Actinidia23551 Actinidia chinensis HOM05D006119 ORTHO05D007641 6.1e-43 177.6 100 85.0
Sopen12g005020 Solanum pennellii HOM05D006119 ORTHO05D007641 6.1e-43 177.6 101 81.2
MSTRG.26287 Avicennia marina HOM05D006119 ORTHO05D007641 8.0e-43 177.2 101 84.2
Cc06_g15170 Coffea canephora HOM05D006119 ORTHO05D007641 8.0e-43 177.2 101 82.2
Oeu038007.1 Olea europaea HOM05D006119 ORTHO05D007641 1.8e-42 176.0 100 84.0
Oeu021261.1 Olea europaea HOM05D006119 ORTHO05D007641 5.2e-42 174.5 99 82.8
Solyc12g010150.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 5.2e-42 174.5 99 81.8
Nn8g39847 Nelumbo nucifera HOM05D006119 ORTHO05D007641 6.8e-42 174.1 101 83.2
Migut.K00337 Erythranthe guttata HOM05D006119 ORTHO05D007641 1.5e-41 172.9 100 83.0
TAR626G1228 Trochodendron aralioides HOM05D006119 ORTHO05D007641 1.5e-41 172.9 100 82.0
Glyma.02G202700 Glycine max HOM05D006119 ORTHO05D007641 1.3e-40 169.9 101 78.2
SalBow1G1238 Salvia bowleyana HOM05D006119 ORTHO05D007641 2.8e-40 168.7 100 81.0
Haze_19227 Corylus avellana HOM05D006119 ORTHO05D007641 3.7e-40 168.3 100 81.0
Hund00673 Selenicereus undatus HOM05D006119 ORTHO05D007641 3.7e-40 168.3 98 82.7
TAR625G1054 Trochodendron aralioides HOM05D006119 ORTHO05D007641 4.8e-40 167.9 100 80.0
Cfa020842 Carpinus fangiana HOM05D006119 ORTHO05D007641 8.3e-40 167.2 100 80.0
Lalb_Chr07g0179791 Lupinus albus HOM05D006119 ORTHO05D007641 1.8e-39 166.0 101 78.2
arahy.Tifrunner.gnm1.ann1.I28AR0 Arachis hypogaea HOM05D006119 ORTHO05D007641 4.1e-39 164.9 100 78.0
ECA234G1280 Erigeron canadensis HOM05D006119 ORTHO05D007641 4.1e-39 164.9 100 74.0
arahy.Tifrunner.gnm1.ann1.TAM15G Arachis hypogaea HOM05D006119 ORTHO05D007641 7.0e-39 164.1 100 78.0
QL02p092825 Quercus lobata HOM05D006119 ORTHO05D007641 1.6e-38 162.9 100 77.0
vmacro06086 Vaccinium macrocarpon HOM05D006119 ORTHO05D007641 2.0e-38 162.5 111 73.0
CiPaw.15G174900 Carya illinoinensis HOM05D006119 ORTHO05D007641 2.7e-38 162.2 100 78.0
Sc18g0007620 Simmondsia chinensis HOM05D006119 ORTHO05D007641 5.9e-38 161.0 102 77.5
Thecc.09G032800 Theobroma cacao HOM05D006119 ORTHO05D007641 5.9e-38 161.0 100 75.0
Lj4g0015042 Lotus japonicus HOM05D006119 ORTHO05D007641 7.7e-38 160.6 100 75.0
Cpa.g.sc46.139 Carica papaya HOM05D006119 ORTHO05D007641 1.0e-37 160.2 101 73.3
Rhsim01G0035400 Rhododendron simsii HOM05D006119 ORTHO05D007641 1.0e-37 160.2 94 80.9
RhsimUnG0039700 Rhododendron simsii HOM05D006119 ORTHO05D007641 1.0e-37 160.2 94 80.9
Gohir.A05G052000 Gossypium hirsutum HOM05D006119 ORTHO05D007641 1.7e-37 159.5 101 72.3
CAN.G1116.12 Capsicum annuum HOM05D006119 ORTHO05D007641 2.3e-37 159.1 103 71.8
Gohir.D05G053500 Gossypium hirsutum HOM05D006119 ORTHO05D007641 2.3e-37 159.1 101 72.3
Sopen07g001370 Solanum pennellii HOM05D006119 ORTHO05D007641 2.3e-37 159.1 100 72.0
Thhalv10015049m.g Eutrema salsugineum HOM05D006119 ORTHO05D007641 2.9e-37 158.7 100 73.0
Gorai.009G055300 Gossypium raimondii HOM05D006119 ORTHO05D007641 2.9e-37 158.7 100 73.0
Manes.06G037000 Manihot esculenta HOM05D006119 ORTHO05D007641 3.8e-37 158.3 100 73.0
Nitab4.5_0004815g0030 Nicotiana tabacum HOM05D006119 ORTHO05D007641 5.0e-37 157.9 122 64.8
Solyc07g005410.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 6.5e-37 157.5 100 71.0
Aqoxy7G03440 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 8.6e-37 157.1 100 75.0
CDE05G1219 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 8.6e-37 157.1 100 74.0
Duzib187G0693 Durio zibethinus HOM05D006119 ORTHO05D007641 1.1e-36 156.8 101 71.3
PGR102G3064 Punica granatum HOM05D006119 ORTHO05D007641 1.1e-36 156.8 100 72.0
Peaxi162Scf00347g01022 Petunia axillaris HOM05D006119 ORTHO05D007641 3.3e-36 155.2 100 74.0
Rhsim03G0256600 Rhododendron simsii HOM05D006119 ORTHO05D007641 7.2e-36 154.1 116 69.8
AL8G34100 Arabidopsis lyrata HOM05D006119 ORTHO05D007641 1.2e-35 153.3 100 70.0
Ciclev10009941m.g Citrus clementina HOM05D006119 ORTHO05D007641 1.2e-35 153.3 100 75.0
MBI15_g26716_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 1.6e-35 152.9 101 71.3
PSO111G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 1.6e-35 152.9 100 70.0
Atru.chr7.85 Acer truncatum HOM05D006119 ORTHO05D007641 2.1e-35 152.5 100 72.0
AT5G58005 Arabidopsis thaliana HOM05D006119 ORTHO05D007641 2.1e-35 152.5 100 70.0
Potri.006G186500 Populus trichocarpa HOM05D006119 ORTHO05D007641 2.1e-35 152.5 100 71.0
Prupe.7G260900 Prunus persica HOM05D006119 ORTHO05D007641 2.8e-35 152.1 101 69.3
BcaB01g04471 Brassica carinata HOM05D006119 ORTHO05D007641 3.6e-35 151.8 100 70.0
HanXRQChr10g0314681 Helianthus annuus HOM05D006119 ORTHO05D007641 3.6e-35 151.8 120 60.8
unitig_899.g15448 Utricularia gibba HOM05D006119 ORTHO05D007641 3.6e-35 151.8 90 77.8
Phvul.003G157000 Phaseolus vulgaris HOM05D006119 ORTHO05D007641 4.7e-35 151.4 97 71.1
CARHR271810 Cardamine hirsuta HOM05D006119 ORTHO05D007641 6.1e-35 151.0 100 69.0
PSO561G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 6.1e-35 151.0 100 70.0
Aa31LG3G13820 Aethionema arabicum HOM05D006119 ORTHO05D007641 8.0e-35 150.6 100 70.0
CANSAT11G0807 Cannabis sativa HOM05D006119 ORTHO05D007641 8.0e-35 150.6 101 70.3
C03p14650 Brassica napus HOM05D006119 ORTHO05D007641 1.0e-34 150.2 100 70.0
MD15G1154500 Malus domestica HOM05D006119 ORTHO05D007641 1.0e-34 150.2 101 69.3
Ca_21116_v3 Cicer arietinum L. HOM05D006119 ORTHO05D007641 1.4e-34 149.8 110 66.4
Nitab4.5_0001478g0060 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.8e-34 149.4 110 69.1
Carub.0008s1855 Capsella rubella HOM05D006119 ORTHO05D007641 2.3e-34 149.1 100 67.0
COL.COLO4_18789 Corchorus olitorius HOM05D006119 ORTHO05D007641 2.3e-34 149.1 100 69.0
Psat0ss6646g0160 Pisum sativum HOM05D006119 ORTHO05D007641 3.0e-34 148.7 103 68.0
Potri.018G109400 Populus trichocarpa HOM05D006119 ORTHO05D007641 4.0e-34 148.3 110 66.4
TWI63G1376 Tripterygium wilfordii HOM05D006119 ORTHO05D007641 5.2e-34 147.9 101 66.3
Sed0003082 Sechium edule HOM05D006119 ORTHO05D007641 1.2e-33 146.7 100 70.0
Sabra18G0092300 Salix brachista HOM05D006119 ORTHO05D007641 1.5e-33 146.4 100 67.0
ClCG06G012280 Citrullus lanatus HOM05D006119 ORTHO05D007641 2.6e-33 145.6 100 69.0
TPR.G39188 Trifolium pratense HOM05D006119 ORTHO05D007641 3.4e-33 145.2 115 65.2
MD02G1009100 Malus domestica HOM05D006119 ORTHO05D007641 4.4e-33 144.8 101 68.3
Nitab4.5_0001813g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 4.4e-33 144.8 88 75.0
HPP92_017474 Vanilla planifolia HOM05D006119 ORTHO05D007641 4.4e-33 144.8 87 75.9
RcHm_v2.0_Chr2g0085901 Rosa chinensis HOM05D006119 ORTHO05D007641 7.5e-33 144.1 101 66.3
Nitab4.5_0002315g0130 Nicotiana tabacum HOM05D006119 ORTHO05D007641 9.8e-33 143.7 110 67.3
Actinidia38675 Actinidia chinensis HOM05D006119 ORTHO05D007641 1.3e-32 143.3 82 80.5
CsaV3_1G028790 Cucumis sativus L. HOM05D006119 ORTHO05D007641 2.2e-32 142.5 99 67.7
ATR0739G093 Amborella trichopoda HOM05D006119 ORTHO05D007641 2.8e-32 142.1 89 71.9
Eucgr.C02591 Eucalyptus grandis HOM05D006119 ORTHO05D007641 3.7e-32 141.7 99 63.6
FvH4_1g01100 Fragaria vesca HOM05D006119 ORTHO05D007641 3.7e-32 141.7 100 66.0
FAN19G0026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 3.7e-32 141.7 100 66.0
Eucgr.L03135 Eucalyptus grandis HOM05D006119 ORTHO05D007641 4.9e-32 141.4 97 63.9
Medtr4g131150 Medicago truncatula HOM05D006119 ORTHO05D007641 4.9e-32 141.4 102 66.7
FAN26G3335 Fragaria x ananassa HOM05D006119 ORTHO05D007641 6.3e-32 141.0 100 66.0
FAN28G1026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 6.3e-32 141.0 100 66.0
A03p12450 Brassica napus HOM05D000882 ORTHO05D001142 8.3e-32 140.6 94 69.1
BolC3t13907H Brassica oleracea HOM05D000882 ORTHO05D001142 8.3e-32 140.6 94 69.1
BraA03t10560Z Brassica rapa HOM05D000882 ORTHO05D001142 8.3e-32 140.6 94 69.1
FAN23G1211 Fragaria x ananassa HOM05D006119 ORTHO05D007641 1.1e-31 140.2 100 65.0
AUR62043251 Chenopodium quinoa HOM05D006119 ORTHO05D007641 1.4e-31 139.8 94 71.3
Nitab4.5_0013449g0010 Nicotiana tabacum HOM05D006119 ORTHO05D007641 3.1e-31 138.7 88 73.9
EL10Ac8g18851 Beta vulgaris HOM05D006119 ORTHO05D007641 4.1e-31 138.3 94 68.1
MELO3C029440.2 Cucumis melo HOM05D006119 ORTHO05D007641 4.1e-31 138.3 111 62.2
Zm00001eb041130 Zea mays HOM05D006119 ORTHO05D007641 4.1e-31 138.3 87 71.3
Nitab4.5_0006408g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.6e-30 136.3 74 81.1
Manes.14G112500 Manihot esculenta HOM05D006119 ORTHO05D007641 1.0e-29 133.7 107 62.6
DCAR_020878 Daucus carota HOM05D006119 ORTHO05D007641 1.7e-29 132.9 72 83.3
Os08g0441400 Oryza sativa ssp. japonica HOM05D006119 ORTHO05D007641 8.6e-29 130.6 87 67.8
PGSC0003DMG400011173 Solanum tuberosum HOM05D006119 ORTHO05D007641 1.6e-27 126.3 74 75.7
CAN.G551.35 Capsicum annuum HOM05D006119 ORTHO05D007641 1.8e-26 122.9 75 76.0
Mapoly0012s0137 Marchantia polymorpha HOM05D006119 ORTHO05D007641 2.6e-25 119.0 95 56.8
Glyma.17G075100 Glycine max HOM05D006119 ORTHO05D007641 1.3e-24 116.7 73 78.1
Sp6g19680 Schrenkiella parvula HOM05D006119 ORTHO05D007641 1.9e-23 112.8 75 69.3
Pp3c18_18500 Physcomitrium patens HOM05D006119 ORTHO05D007641 1.2e-22 110.2 101 56.4
Pp3c21_10430 Physcomitrium patens HOM05D006119 ORTHO05D007641 3.0e-21 105.5 96 55.2
Sed0018834 Sechium edule HOM05D006119 ORTHO05D007641 8.6e-21 104.0 73 63.0
SMO137G0238 Selaginella moellendorffii HOM05D006119 ORTHO05D007641 2.5e-20 102.4 87 58.6
Aqoxy4G01852 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 1.6e-19 99.8 58 77.6
SEGI_38164 Sequoiadendron giganteum HOM05D006119 ORTHO05D007641 1.6e-19 99.8 64 68.8
Nitab4.5_0003612g0050 Nicotiana tabacum HOM05D006119 ORTHO05D007641 3.7e-16 88.6 52 76.9
AagrBONN_evm.TU.Sc2ySwM_228.1886 Anthoceros agrestis HOM05D006119 ORTHO05D007641 4.9e-16 88.2 64 60.9
CDE05G1090 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 3.2e-15 85.5 66 62.1
BcaNung07255 Brassica carinata HOM05D000882 ORTHO05D001142 5.6e-12 74.7 48 64.6
Pp3c22_3250 Physcomitrium patens HOM05D006119 ORTHO05D007641 8.9e-10 67.4 81 42.0
PSO339G5888 Papaver somniferum HOM05D006119 ORTHO05D007641 1.5e-09 66.6 85 43.5
Rhsim04G0128900 Rhododendron simsii HOM05D002149 ORTHO05D002154 2.2e-08 62.8 33 84.8
MBI15_g07754_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 2.4e-07 59.3 65 47.7


User provided reference genes

Program Settings