Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42856 Davidia involucrata HOM05D005809 ORTHO05D007259 1.2e-95 353.2 180 100.0
Dinv43244 Davidia involucrata HOM05D005809 ORTHO05D007259 2.2e-86 322.4 164 100.0
Dinv41380 Davidia involucrata HOM05D005809 ORTHO05D007259 1.1e-74 283.5 165 89.1
GSVIVG01023603001 Vitis vinifera HOM05D005809 ORTHO05D007259 2.9e-62 242.3 165 73.9
Hma1.2p1_0222F.1_g093550 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 3.8e-62 241.9 165 75.8
CSS0045900 Camellia sinensis var. sinensis HOM05D005809 ORTHO05D007259 3.2e-61 238.8 165 75.2
QL02p093215 Quercus lobata HOM05D005809 ORTHO05D007259 4.4e-58 228.4 166 72.9
Lalb_Chr23g0275681 Lupinus albus HOM05D005809 ORTHO05D007259 1.3e-57 226.9 165 71.5
CiPaw.15G168900 Carya illinoinensis HOM05D005809 ORTHO05D007259 4.8e-57 224.9 165 69.1
Prupe.7G262800 Prunus persica HOM05D005809 ORTHO05D007259 2.4e-56 222.6 165 69.7
TAR636G3217 Trochodendron aralioides HOM05D005809 ORTHO05D007259 9.1e-56 220.7 166 71.1
TWI34G1090 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 2.6e-55 219.2 166 68.1
Thecc.09G030800 Theobroma cacao HOM05D005809 ORTHO05D007259 3.4e-55 218.8 165 67.9
Ciclev10009378m.g Citrus clementina HOM05D005809 ORTHO05D007259 4.5e-55 218.4 165 66.1
Hma1.2p1_0010F.1_g006710 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 4.5e-55 218.4 162 71.6
MD02G1007700 Malus domestica HOM05D005809 ORTHO05D007259 7.7e-55 217.6 165 68.5
Eucgr.C02542 Eucalyptus grandis HOM05D005809 ORTHO05D007259 1.3e-54 216.9 166 68.1
Nn8g39891 Nelumbo nucifera HOM05D005809 ORTHO05D007259 2.9e-54 215.7 166 67.5
Lj6g0016819 Lotus japonicus HOM05D005809 ORTHO05D007259 8.5e-54 214.2 164 66.5
Gohir.D05G056000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 1.4e-53 213.4 165 67.9
Gorai.009G057000 Gossypium raimondii HOM05D005809 ORTHO05D007259 1.9e-53 213.0 165 67.9
Eucgr.C02492 Eucalyptus grandis HOM05D005809 ORTHO05D007259 5.5e-53 211.5 166 66.9
Duzib187G1947 Durio zibethinus HOM05D005809 ORTHO05D007259 9.4e-53 210.7 165 68.5
MELO3C004136.2 Cucumis melo HOM05D005809 ORTHO05D007259 1.6e-52 209.9 164 65.2
CANSAT11G2656 Cannabis sativa HOM05D005809 ORTHO05D007259 2.1e-52 209.5 166 66.3
Atru.chr7.51 Acer truncatum HOM05D005809 ORTHO05D007259 2.7e-52 209.1 161 65.8
COL.COLO4_18808 Corchorus olitorius HOM05D005809 ORTHO05D007259 3.6e-52 208.8 165 63.0
Ca_03733_v3 Cicer arietinum L. HOM05D005809 ORTHO05D007259 4.7e-52 208.4 167 65.3
Rhsim01G0033400 Rhododendron simsii HOM05D005809 ORTHO05D007259 4.7e-52 208.4 158 66.5
CsaV3_2G007490 Cucumis sativus L. HOM05D005809 ORTHO05D007259 7.9e-52 207.6 164 64.6
MSTRG.19648 Avicennia marina HOM05D005809 ORTHO05D007259 1.0e-51 207.2 165 65.5
TWI32G0918 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 1.8e-51 206.5 158 69.0
vmacro05441 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 1.8e-51 206.5 172 62.8
RcHm_v2.0_Chr2g0085671 Rosa chinensis HOM05D005809 ORTHO05D007259 2.6e-50 202.6 165 66.1
TPR.G20735 Trifolium pratense HOM05D005809 ORTHO05D007259 3.3e-50 202.2 167 65.3
Sed0001225 Sechium edule HOM05D005809 ORTHO05D007259 5.7e-50 201.4 164 61.6
Phvul.009G195100 Phaseolus vulgaris HOM05D005809 ORTHO05D007259 9.7e-50 200.7 165 63.6
Glyma.06G219200 Glycine max HOM05D005809 ORTHO05D007259 1.7e-49 199.9 159 65.4
FAN23G2666 Fragaria x ananassa HOM05D005809 ORTHO05D007259 2.8e-49 199.1 165 65.5
Gohir.A05G055000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 3.7e-49 198.7 157 66.9
Actinidia04301 Actinidia chinensis HOM05D005809 ORTHO05D007259 1.4e-48 196.8 130 76.9
Migut.J01341 Erythranthe guttata HOM05D005809 ORTHO05D007259 1.4e-48 196.8 165 62.4
Medtr2g460780 Medicago truncatula HOM05D005809 ORTHO05D007259 3.1e-48 195.7 165 61.8
Solyc07g005640.3 Solanum lycopersicum HOM05D005809 ORTHO05D007259 9.1e-48 194.1 165 61.8
ECA247G0266 Erigeron canadensis HOM05D005809 ORTHO05D007259 1.2e-47 193.7 166 65.1
PGSC0003DMG401011139 Solanum tuberosum HOM05D005809 ORTHO05D007259 1.6e-47 193.4 166 62.0
Sc08g0005640 Simmondsia chinensis HOM05D005809 ORTHO05D007259 2.0e-47 193.0 165 63.6
Sopen07g001740 Solanum pennellii HOM05D005809 ORTHO05D007259 2.0e-47 193.0 165 60.6
arahy.Tifrunner.gnm1.ann1.Z5GGTZ Arachis hypogaea HOM05D005809 ORTHO05D007259 3.5e-47 192.2 159 62.3
Glyma.06G219400 Glycine max HOM05D005809 ORTHO05D007259 3.5e-47 192.2 165 61.2
PGR102G1797 Punica granatum HOM05D005809 ORTHO05D007259 3.5e-47 192.2 165 62.4
arahy.Tifrunner.gnm1.ann1.46B1EJ Arachis hypogaea HOM05D005809 ORTHO05D007259 4.5e-47 191.8 159 62.3
Nitab4.5_0001571g0010 Nicotiana tabacum HOM05D005809 ORTHO05D007259 4.5e-47 191.8 171 60.2
BraA10t43609Z Brassica rapa HOM05D005809 ORTHO05D007259 1.3e-46 190.3 165 60.0
CARHR271730 Cardamine hirsuta HOM05D005809 ORTHO05D007259 1.7e-46 189.9 166 60.8
vmacro16802 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 2.2e-46 189.5 202 54.0
Oeu052197.1 Olea europaea HOM05D005809 ORTHO05D007259 2.9e-46 189.1 166 62.0
Aqoxy2G02328 Aquilegia oxysepala HOM05D005809 ORTHO05D007259 5.0e-46 188.3 165 61.2
AL8G34030 Arabidopsis lyrata HOM05D005809 ORTHO05D007259 5.0e-46 188.3 170 58.8
Nitab4.5_0005653g0040 Nicotiana tabacum HOM05D005809 ORTHO05D007259 6.5e-46 188.0 163 60.7
Sp6g19620 Schrenkiella parvula HOM05D005809 ORTHO05D007259 1.5e-45 186.8 170 58.2
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 1.9e-45 186.4 165 58.8
Potri.006G184600 Populus trichocarpa HOM05D005809 ORTHO05D007259 4.2e-45 185.3 167 61.1
HanXRQChr17g0552351 Helianthus annuus HOM05D005809 ORTHO05D007259 5.5e-45 184.9 165 64.2
Peaxi162Scf00401g00082 Petunia axillaris HOM05D005809 ORTHO05D007259 5.5e-45 184.9 158 60.1
THA.LOC104817821 Tarenaya hassleriana HOM05D005809 ORTHO05D007259 5.5e-45 184.9 166 59.0
FvH4_1g00940 Fragaria vesca HOM05D005809 ORTHO05D007259 7.2e-45 184.5 158 63.3
AT5G57950 Arabidopsis thaliana HOM05D005809 ORTHO05D007259 9.4e-45 184.1 165 59.4
Carub.0008s1848 Capsella rubella HOM05D005809 ORTHO05D007259 1.2e-44 183.7 165 58.2
Manes.06G033951 Manihot esculenta HOM05D005809 ORTHO05D007259 1.2e-44 183.7 167 61.7
A10p16200 Brassica napus HOM05D005809 ORTHO05D007259 6.1e-44 181.4 165 58.8
Duzib168G0271 Durio zibethinus HOM05D005809 ORTHO05D007259 8.0e-44 181.0 158 65.2
Lsat_1_v5_gn_8_63301 Lactuca sativa HOM05D005809 ORTHO05D007259 8.0e-44 181.0 158 63.3
Ah.02g128190 Amaranthus hybridus HOM05D005809 ORTHO05D007259 1.0e-43 180.6 165 60.0
Sabra06G0140200 Salix brachista HOM05D005809 ORTHO05D007259 1.8e-43 179.9 161 60.9
Psat1g021800 Pisum sativum HOM05D005809 ORTHO05D007259 4.0e-43 178.7 165 57.0
DCAR_017909 Daucus carota HOM05D005809 ORTHO05D007259 5.2e-43 178.3 158 62.0
FAN28G0834 Fragaria x ananassa HOM05D005809 ORTHO05D007259 6.7e-43 177.9 157 61.8
PSO063G2086 Papaver somniferum HOM05D005809 ORTHO05D007259 3.3e-42 175.6 165 57.6
Aa31LG3G13770 Aethionema arabicum HOM05D000853 ORTHO05D000723 7.5e-42 174.5 159 57.2
SalBow1G5910 Salvia bowleyana HOM05D005809 ORTHO05D007259 9.7e-42 174.1 158 59.5
PSO782G1751 Papaver somniferum HOM05D005809 ORTHO05D007259 1.7e-41 173.3 165 57.0
Cpa.g.sc46.154 Carica papaya HOM05D005809 ORTHO05D007259 2.8e-41 172.6 158 59.5
C09p49790 Brassica napus HOM05D005809 ORTHO05D007259 6.3e-41 171.4 165 54.5
CAN.G160.58 Capsicum annuum HOM05D005809 ORTHO05D007259 6.3e-41 171.4 157 57.3
BolC9t57830H Brassica oleracea HOM05D005809 ORTHO05D007259 1.1e-40 170.6 165 53.9
ClCG02G014530 Citrullus lanatus HOM05D005809 ORTHO05D007259 3.1e-40 169.1 145 62.1
Thhalv10014592m.g Eutrema salsugineum HOM05D005809 ORTHO05D007259 5.3e-40 168.3 158 56.3
Zm00001eb312980 Zea mays HOM05D005809 ORTHO05D007259 1.6e-39 166.8 167 53.3
Haze_19206 Corylus avellana HOM05D005809 ORTHO05D007259 2.7e-39 166.0 160 57.5
HPP92_016035 Vanilla planifolia HOM05D005809 ORTHO05D007259 3.5e-39 165.6 169 53.3
HPP92_016019 Vanilla planifolia HOM05D005809 ORTHO05D007259 1.0e-38 164.1 169 52.1
Lj9C717G7 Lonicera japonica HOM05D005809 ORTHO05D007259 1.1e-37 160.6 113 71.7
SEGI_31268 Sequoiadendron giganteum HOM05D005809 ORTHO05D007259 1.5e-37 160.2 168 53.0
ATR0739G206 Amborella trichopoda HOM05D005809 ORTHO05D007259 1.9e-37 159.8 168 56.0
Os09g0420600 Oryza sativa ssp. japonica HOM05D005809 ORTHO05D007259 1.9e-37 159.8 165 52.7
SGA_v2.0_scaffold265G46107 Striga asiatica HOM05D005809 ORTHO05D007259 1.9e-37 159.8 158 53.8
CDE12G0564 Ceratophyllum demersum HOM05D005809 ORTHO05D007259 2.7e-36 156.0 175 49.7
Cc06_g14990 Coffea canephora HOM05D005809 ORTHO05D007259 1.4e-32 143.7 102 69.6
AUR62035200 Chenopodium quinoa HOM05D005809 ORTHO05D007259 2.0e-31 139.8 101 66.3
RcHm_v2.0_Chr5g0031291 Rosa chinensis HOM05D005809 ORTHO05D007259 2.0e-31 139.8 145 55.9
Hund01517 Selenicereus undatus HOM05D005809 ORTHO05D007259 2.9e-30 136.0 105 66.7
Mapoly0003s0072 Marchantia polymorpha HOM05D005809 ORTHO05D007259 1.5e-29 133.7 168 45.2
AagrBONN_evm.TU.Sc2ySwM_117.3948 Anthoceros agrestis HOM05D005809 ORTHO05D007259 2.5e-29 132.9 167 42.5
Pp3c16_13530 Physcomitrium patens HOM05D005809 ORTHO05D007259 4.2e-29 132.1 167 43.1
Pp3c8_2960 Physcomitrium patens HOM05D005809 ORTHO05D007259 5.5e-29 131.7 167 43.7
Aa31LG1G19310 Aethionema arabicum HOM05D005809 ORTHO05D007259 7.2e-29 131.3 93 65.6
Actinidia38322 Actinidia chinensis HOM05D005809 ORTHO05D007259 1.6e-28 130.2 100 71.0
EL10As1g23143 Beta vulgaris HOM05D005809 ORTHO05D007259 1.6e-28 130.2 105 64.8
FAN25G0559 Fragaria x ananassa HOM05D005809 ORTHO05D007259 2.1e-28 129.8 121 57.9
SMO361G0343 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 9.8e-26 120.9 166 42.8
SMO361G0248 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 5.4e-24 115.2 161 43.5
SHI02853 Sapria himalayana HOM05D005809 ORTHO05D007259 6.6e-22 108.2 154 42.9
CSS0015204 Camellia sinensis var. sinensis HOM05D000853 ORTHO05D000723 3.0e-19 99.4 75 73.3
Oeu007777.1 Olea europaea HOM05D005809 ORTHO05D007259 9.8e-18 94.4 89 52.8
MD09G1175000 Malus domestica HOM05D005809 ORTHO05D007259 1.7e-17 93.6 92 59.8
Oeu049715.1 Olea europaea HOM05D005809 ORTHO05D007259 2.2e-17 93.2 91 51.6
Oeu038698.1 Olea europaea HOM05D005809 ORTHO05D007259 2.9e-17 92.8 89 51.7
Sed0002126 Sechium edule HOM05D005809 ORTHO05D007259 4.9e-17 92.0 95 54.7
FAN21G3780 Fragaria x ananassa HOM05D005809 ORTHO05D007259 1.8e-16 90.1 83 59.0
MCO13G469 Micromonas commoda HOM05D005809 ORTHO05D007259 7.0e-16 88.2 164 32.9
Oeu017561.1 Olea europaea HOM05D005809 ORTHO05D007259 7.0e-16 88.2 89 49.4
FAN26G2229 Fragaria x ananassa HOM05D005809 ORTHO05D007259 2.0e-15 86.7 74 60.8
FvH4_3g18530 Fragaria vesca HOM05D005809 ORTHO05D007259 3.0e-14 82.8 80 56.2
FAN11G2737 Fragaria x ananassa HOM05D005809 ORTHO05D007259 3.0e-14 82.8 80 56.2
vmacro11582 Vaccinium macrocarpon HOM05D005809 ORTHO05D010075 6.6e-14 81.6 56 73.2
Cre04.g226950 Chlamydomonas reinhardtii HOM05D005809 ORTHO05D007259 2.1e-12 76.6 122 35.2
CBR_g38078 Chara braunii HOM05D000019 ORTHO05D000048 8.0e-12 74.7 139 32.4
Oeu029241.1 Olea europaea HOM05D005809 ORTHO05D007259 1.4e-11 73.9 77 45.5
PRCOL_00000214 Prasinoderma coloniale HOM05D005809 ORTHO05D007259 6.8e-11 71.6 170 31.2
Cc06_g14980 Coffea canephora HOM05D005809 ORTHO05D007259 2.0e-07 60.1 38 78.9
Sc08g0005650 Simmondsia chinensis HOM05D005809 ORTHO05D007259 6.0e-07 58.5 63 52.4


User provided reference genes

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