Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 2.1e-205 718.8 356 100.0
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 2.1e-205 718.8 356 100.0
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.2e-171 606.7 354 83.3
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.7e-170 602.8 354 82.5
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.2e-169 598.6 356 82.6
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.3e-162 576.6 342 82.2
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 2.1e-160 569.3 352 79.5
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 4.9e-154 548.1 347 78.1
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 4.9e-154 548.1 346 77.5
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 6.4e-154 547.7 355 73.8
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.2e-153 545.4 354 77.1
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 3.2e-153 545.4 349 77.1
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 2.1e-149 532.7 347 74.9
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 3.1e-148 528.9 355 72.7
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 2.9e-146 522.3 344 71.2
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 2.9e-146 522.3 349 73.6
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 1.4e-145 520.0 360 70.6
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 7.1e-145 517.7 362 71.0
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 7.1e-145 517.7 354 73.7
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 1.2e-144 516.9 347 72.6
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 2.7e-144 515.8 347 74.1
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 4.6e-144 515.0 349 73.1
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 1.1e-142 510.4 346 73.7
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 1.1e-142 510.4 358 70.1
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 1.5e-142 510.0 360 69.2
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 4.3e-142 508.4 375 68.8
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 9.6e-142 507.3 350 72.0
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 4.8e-141 505.0 347 71.2
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 6.2e-141 504.6 360 68.3
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 6.2e-141 504.6 360 68.3
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 8.1e-141 504.2 347 71.2
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 1.8e-140 503.1 348 71.8
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 1.8e-140 503.1 355 69.0
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 3.1e-140 502.3 347 70.9
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 3.1e-140 502.3 355 68.7
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 6.9e-140 501.1 354 67.2
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 6.9e-140 501.1 356 66.9
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 1.5e-139 500.0 347 70.9
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 4.5e-139 498.4 358 66.8
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 4.5e-139 498.4 360 66.9
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 7.6e-139 497.7 355 68.5
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 9.9e-139 497.3 358 69.6
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 6.4e-138 494.6 356 70.8
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 1.4e-137 493.4 347 70.3
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 7.1e-137 491.1 349 69.6
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 1.6e-136 490.0 339 71.4
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 1.3e-135 486.9 347 69.5
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 1.3e-135 486.9 364 66.5
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 1.3e-135 486.9 364 66.5
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 3.0e-135 485.7 347 68.9
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 1.1e-134 483.8 348 68.1
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 1.1e-134 483.8 345 67.5
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 1.9e-134 483.0 374 62.6
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 9.6e-134 480.7 358 66.8
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 1.3e-133 480.3 350 66.9
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 6.2e-133 478.0 345 66.4
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 9.0e-132 474.2 352 67.6
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 9.0e-132 474.2 348 69.0
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 1.0e-130 470.7 369 64.0
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 1.1e-129 467.2 350 67.1
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 7.1e-129 464.5 329 69.3
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 2.1e-128 463.0 350 66.6
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 3.9e-127 458.8 358 64.0
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 3.9e-127 458.8 367 63.2
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 4.3e-126 455.3 352 66.5
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 5.7e-126 454.9 364 64.0
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 7.4e-126 454.5 368 63.9
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 3.7e-125 452.2 361 62.3
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 1.1e-124 450.7 359 63.0
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 1.5e-123 446.8 360 63.9
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 3.4e-123 445.7 354 61.6
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 1.0e-122 444.1 360 65.3
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 4.2e-121 438.7 351 62.4
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 2.1e-120 436.4 361 62.0
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 2.7e-120 436.0 354 63.0
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 3.5e-120 435.6 363 60.9
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 7.9e-120 434.5 354 61.0
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 1.3e-119 433.7 354 62.1
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 2.3e-119 433.0 361 61.2
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 3.0e-119 432.6 361 61.5
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 2.5e-118 429.5 361 62.9
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 3.3e-118 429.1 359 61.0
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 2.8e-117 426.0 370 60.8
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 3.7e-117 425.6 361 60.1
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 2.4e-116 422.9 355 61.1
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 2.6e-115 419.5 364 60.7
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 6.5e-114 414.8 337 62.9
Dinv41342 Davidia involucrata HOM05D006038 ORTHO05D007547 2.3e-111 406.4 233 85.0
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 1.1e-110 404.1 335 61.8
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 3.3e-110 402.5 335 61.5
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 7.4e-110 401.4 335 61.2
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 4.8e-109 398.7 336 61.3
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 4.8e-109 398.7 361 57.3
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 1.2e-107 394.0 328 61.6
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 7.7e-99 364.8 249 71.5
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 3.8e-98 362.5 237 73.8
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 1.1e-89 334.3 345 53.0
CSS0027410 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 5.5e-89 332.0 211 78.2
CSS0013086 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 5.2e-87 325.5 211 76.8
arahy.Tifrunner.gnm1.ann1.3R6I6F Arachis hypogaea HOM05D006038 ORTHO05D007547 8.8e-87 324.7 225 71.6
CSS0009266 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 7.5e-86 321.6 211 75.4
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 6.3e-85 318.5 345 50.7
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 1.8e-79 300.4 279 53.8
Oeu027617.1 Olea europaea HOM05D006038 ORTHO05D007547 1.8e-79 300.4 164 83.5
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 1.3e-77 294.3 353 45.0
Lj7A464T42 Lonicera japonica HOM05D006038 ORTHO05D007547 1.0e-71 274.6 203 69.0
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 3.0e-71 273.1 370 40.3
Cfa020780 Carpinus fangiana HOM05D006038 ORTHO05D007547 9.8e-70 268.1 204 65.7
COL.COLO4_05400 Corchorus olitorius HOM05D006038 ORTHO05D007547 1.4e-68 264.2 216 57.9
SHI18668 Sapria himalayana HOM05D006038 ORTHO05D007547 1.6e-64 250.8 315 45.4
Lj7A464G38 Lonicera japonica HOM05D006038 ORTHO05D007547 8.9e-55 218.4 144 76.4
CSS0024276 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.4e-52 210.3 211 54.5
CSS0022095 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.6e-51 206.1 120 82.5
A01p07320 Brassica napus HOM05D006038 ORTHO05D007547 8.1e-48 195.3 236 47.0
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 2.3e-47 193.7 376 31.6
SEGI_08614 Sequoiadendron giganteum HOM05D006038 ORTHO05D007547 7.6e-46 188.7 146 62.3
Pp3c6_28770 Physcomitrium patens HOM05D006038 ORTHO05D007547 1.9e-33 147.5 168 43.5
CSS0047172 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.3e-25 119.8 64 89.1
CSS0031036 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 5.3e-23 112.8 64 82.8
CSS0034156 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.6e-19 99.8 64 78.1
Zm00001eb124580 Zea mays HOM05D006038 ORTHO05D007547 3.2e-12 77.0 52 65.4
Cre02.g090600 Chlamydomonas reinhardtii HOM05D006038 ORTHO05D007547 5.5e-12 76.3 158 32.9
Zm00001eb038770 Zea mays HOM05D006038 ORTHO05D007547 1.6e-11 74.7 53 66.0
Zm00001eb046820 Zea mays HOM05D006038 ORTHO05D007547 1.6e-11 74.7 53 66.0
Zm00001eb051760 Zea mays HOM05D006038 ORTHO05D007547 1.6e-11 74.7 53 66.0
Zm00001eb369920 Zea mays HOM05D006038 ORTHO05D007547 3.5e-11 73.6 57 59.6
Zm00001eb253640 Zea mays HOM05D006038 ORTHO05D007547 6.0e-11 72.8 52 65.4
BcaNung03435 Brassica carinata HOM05D001147 ORTHO05D000823 1.0e-10 72.0 119 39.5
QL93p0107_0059 Quercus lobata HOM05D006038 ORTHO05D007547 8.7e-10 68.9 56 50.0
Zm00001eb021100 Zea mays HOM05D002913 ORTHO05D026003 5.3e-07 59.7 49 57.1
Zm00001eb156390 Zea mays HOM05D009386 ORTHO05D011419 5.3e-07 59.7 49 57.1
Zm00001eb343430 Zea mays HOM05D002913 ORTHO05D020952 5.3e-07 59.7 49 57.1
Zm00001eb354900 Zea mays HOM05D002913 ORTHO05D026003 5.3e-07 59.7 49 57.1


User provided reference genes

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