Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42787 Davidia involucrata HOM05D004507 ORTHO05D004874 7.2e-96 354.0 189 100.0
Dinv43314 Davidia involucrata HOM05D004507 ORTHO05D004874 7.2e-96 354.0 189 100.0
Dinv41307 Davidia involucrata HOM05D004507 ORTHO05D004874 8.0e-63 244.2 187 73.3
Thecc.09G160500 Theobroma cacao HOM05D004507 ORTHO05D004874 1.3e-57 226.9 194 68.0
Duzib150G1659 Durio zibethinus HOM05D004507 ORTHO05D004874 3.9e-57 225.3 192 67.2
TAR625G0362 Trochodendron aralioides HOM05D004507 ORTHO05D004874 5.1e-57 224.9 184 67.9
Potri.018G099100 Populus trichocarpa HOM05D004507 ORTHO05D004874 2.8e-55 219.2 191 65.4
Potri.006G177000 Populus trichocarpa HOM05D004507 ORTHO05D004874 1.1e-54 217.2 192 64.6
TAR626G0275 Trochodendron aralioides HOM05D004507 ORTHO05D004874 1.8e-54 216.5 191 62.3
TAR383G0901 Trochodendron aralioides HOM05D004507 ORTHO05D004874 6.8e-54 214.5 189 64.0
Hma1.2p1_0156F.1_g068730 Hydrangea macrophylla HOM05D004507 ORTHO05D004874 3.4e-53 212.2 189 63.0
Duzib187G0534 Durio zibethinus HOM05D004507 ORTHO05D004874 4.4e-53 211.8 191 64.4
CiPaw.07G186500 Carya illinoinensis HOM05D004507 ORTHO05D004874 5.8e-53 211.5 192 64.1
Nn8g40236 Nelumbo nucifera HOM05D004507 ORTHO05D004874 1.7e-52 209.9 187 65.2
QL02p095594 Quercus lobata HOM05D004507 ORTHO05D004874 6.4e-52 208.0 194 63.4
TAR636G1916 Trochodendron aralioides HOM05D004507 ORTHO05D004874 1.4e-51 206.8 188 63.3
Duzib168G0769 Durio zibethinus HOM05D004507 ORTHO05D004874 3.2e-51 205.7 189 64.0
Gohir.D08G097200 Gossypium hirsutum HOM05D004507 ORTHO05D004874 4.1e-51 205.3 189 63.5
Atru.chr7.491 Acer truncatum HOM05D004507 ORTHO05D004874 1.2e-50 203.8 188 62.8
Peaxi162Scf00525g00089 Petunia axillaris HOM05D004507 ORTHO05D004874 2.7e-50 202.6 186 61.8
Gorai.004G104000 Gossypium raimondii HOM05D004507 ORTHO05D004874 3.5e-50 202.2 189 62.4
Sabra06G0135200 Salix brachista HOM05D004507 ORTHO05D004874 4.6e-50 201.8 193 62.7
Sabra18G0085600 Salix brachista HOM05D004507 ORTHO05D004874 1.3e-49 200.3 191 60.7
Cpa.g.sc75.20 Carica papaya HOM05D004507 ORTHO05D004874 1.5e-48 196.8 189 59.3
Manes.14G147700 Manihot esculenta HOM05D004507 ORTHO05D004874 3.3e-48 195.7 189 61.4
Rhsim01G0012400 Rhododendron simsii HOM05D004507 ORTHO05D004874 4.3e-48 195.3 176 63.6
PGSC0003DMG400011171 Solanum tuberosum HOM05D004507 ORTHO05D004874 5.6e-48 194.9 182 59.9
Ciclev10009640m.g Citrus clementina HOM05D004507 ORTHO05D004874 1.2e-47 193.7 189 61.4
Eucgr.C00212 Eucalyptus grandis HOM05D004507 ORTHO05D004874 1.1e-46 190.7 196 58.7
CiPaw.08G040400 Carya illinoinensis HOM05D004507 ORTHO05D004874 3.1e-46 189.1 180 58.9
Haze_22171 Corylus avellana HOM05D004507 ORTHO05D004874 4.0e-46 188.7 186 60.2
Nitab4.5_0001427g0130 Nicotiana tabacum HOM05D004507 ORTHO05D004874 5.2e-46 188.3 210 51.9
Cfa013550 Carpinus fangiana HOM05D004507 ORTHO05D004874 1.2e-45 187.2 184 60.3
Sopen07g002400 Solanum pennellii HOM05D004507 ORTHO05D004874 1.2e-45 187.2 185 59.5
Nitab4.5_0002587g0090 Nicotiana tabacum HOM05D004507 ORTHO05D004874 5.8e-45 184.9 187 58.8
Nn2g12545 Nelumbo nucifera HOM05D004507 ORTHO05D004874 7.6e-45 184.5 179 60.9
Oeu045661.2 Olea europaea HOM05D004507 ORTHO05D004874 2.2e-44 183.0 182 61.0
Aqoxy7G03243 Aquilegia oxysepala HOM05D004507 ORTHO05D004874 7.1e-43 177.9 190 57.9
TWI34G1692 Tripterygium wilfordii HOM05D004507 ORTHO05D004874 1.2e-42 177.2 190 54.7
ECA240G1410 Erigeron canadensis HOM05D004507 ORTHO05D004874 2.7e-42 176.0 186 53.8
ECA234G3792 Erigeron canadensis HOM05D004507 ORTHO05D004874 1.0e-41 174.1 186 54.3
Lsat_1_v5_gn_7_51920 Lactuca sativa HOM05D004507 ORTHO05D004874 1.3e-41 173.7 190 54.2
COL.COLO4_24287 Corchorus olitorius HOM05D004507 ORTHO05D004874 1.5e-40 170.2 198 58.1
Nitab4.5_0007380g0020 Nicotiana tabacum HOM05D004507 ORTHO05D004874 3.3e-40 169.1 189 58.2
Lsat_1_v5_gn_5_87560 Lactuca sativa HOM05D004507 ORTHO05D004874 7.3e-40 167.9 190 50.5
Prupe.1G097600 Prunus persica HOM05D004507 ORTHO05D004874 7.3e-40 167.9 198 55.6
PGR142G2563 Punica granatum HOM05D004507 ORTHO05D004874 7.3e-40 167.9 186 56.5
EL10Ac8g18870 Beta vulgaris HOM05D004507 ORTHO05D004874 2.4e-38 162.9 196 48.5
Sed0006958 Sechium edule HOM05D004507 ORTHO05D004874 4.0e-38 162.2 192 54.7
ClCG06G012890 Citrullus lanatus HOM05D004507 ORTHO05D004874 1.2e-37 160.6 182 53.8
Lsat_1_v5_gn_8_64381 Lactuca sativa HOM05D004507 ORTHO05D004874 1.2e-37 160.6 191 51.3
TWI32G0773 Tripterygium wilfordii HOM05D004507 ORTHO05D004874 5.8e-37 158.3 190 49.5
HanXRQChr10g0306471 Helianthus annuus HOM05D004507 ORTHO05D004874 1.3e-36 157.1 187 49.7
VMungo1215G3417 Vigna mungo HOM05D004507 ORTHO05D004874 1.3e-36 157.1 184 50.0
Glyma.13G091500 Glycine max HOM05D004507 ORTHO05D004874 2.9e-36 156.0 193 50.3
Glyma.17G068800 Glycine max HOM05D004507 ORTHO05D004874 2.9e-36 156.0 187 51.9
THA.LOC104803518 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 4.9e-36 155.2 186 51.6
MSTRG.6179 Avicennia marina HOM05D004507 ORTHO05D004874 8.4e-36 154.5 184 50.5
Lalb_Chr12g0199041 Lupinus albus HOM05D004507 ORTHO05D004874 8.4e-36 154.5 189 50.3
Ca_21181_v3 Cicer arietinum L. HOM05D004507 ORTHO05D004874 1.1e-35 154.1 185 50.3
MBI15_g25682_MAGBIO Magnolia biondii HOM05D004507 ORTHO05D004874 1.9e-35 153.3 188 52.1
PSO782G3560 Papaver somniferum HOM05D004507 ORTHO05D004874 1.9e-35 153.3 187 53.5
Lalb_Chr13g0300541 Lupinus albus HOM05D004507 ORTHO05D004874 3.2e-35 152.5 192 51.6
CSS0033256 Camellia sinensis var. sinensis HOM05D004507 ORTHO05D004874 5.4e-35 151.8 150 59.3
Gohir.A08G235500 Gossypium hirsutum HOM05D004507 ORTHO05D004874 7.1e-35 151.4 182 52.2
Sed0016542 Sechium edule HOM05D004507 ORTHO05D004874 7.1e-35 151.4 190 48.4
Gorai.004G273100 Gossypium raimondii HOM05D004507 ORTHO05D004874 9.3e-35 151.0 182 51.6
Lj4g0026981 Lotus japonicus HOM05D004507 ORTHO05D004874 9.3e-35 151.0 187 51.3
Gohir.D08G255900 Gossypium hirsutum HOM05D004507 ORTHO05D004874 1.6e-34 150.2 182 51.6
Phvul.003G151300 Phaseolus vulgaris HOM05D004507 ORTHO05D004874 2.1e-34 149.8 184 49.5
MELO3C010170.2 Cucumis melo HOM05D004507 ORTHO05D004874 4.6e-34 148.7 186 50.0
HanXRQChr09g0245171 Helianthus annuus HOM05D004507 ORTHO05D004874 4.6e-34 148.7 163 55.2
THA.LOC104819987 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 1.0e-33 147.5 186 48.9
TPR.G5348 Trifolium pratense HOM05D004507 ORTHO05D004874 3.0e-33 146.0 188 49.5
Psat0s1742g0040 Pisum sativum HOM05D004507 ORTHO05D004874 5.1e-33 145.2 185 47.6
Oeu031854.1 Olea europaea HOM05D004507 ORTHO05D004874 6.6e-33 144.8 159 57.9
DCAR_017942 Daucus carota HOM05D004507 ORTHO05D004874 8.7e-33 144.4 195 47.7
CsaV3_1G029460 Cucumis sativus L. HOM05D004507 ORTHO05D004874 1.1e-32 144.1 186 49.5
MBI14_g08083_MAGBIO Magnolia biondii HOM05D004507 ORTHO05D004874 1.5e-32 143.7 163 54.6
SGA_v2.0_scaffold66G22517 Striga asiatica HOM05D004507 ORTHO05D004874 1.9e-32 143.3 188 47.3
Thhalv10026358m.g Eutrema salsugineum HOM05D004507 ORTHO05D004874 3.3e-32 142.5 184 50.5
Carub.0007s1019 Capsella rubella HOM05D004507 ORTHO05D004874 4.3e-32 142.1 184 48.9
Sp7g28290 Schrenkiella parvula HOM05D004507 ORTHO05D004874 4.3e-32 142.1 184 49.5
AUR62039753 Chenopodium quinoa HOM05D004507 ORTHO05D004874 1.3e-31 140.6 157 52.2
Migut.K00276 Erythranthe guttata HOM05D004507 ORTHO05D004874 1.6e-31 140.2 191 48.2
AT4G30410 Arabidopsis thaliana HOM05D004507 ORTHO05D004874 2.1e-31 139.8 184 48.9
AL7G21740 Arabidopsis lyrata HOM05D004507 ORTHO05D004874 2.8e-31 139.4 184 48.4
BcaB03g12646 Brassica carinata HOM05D004507 ORTHO05D004874 2.8e-31 139.4 184 48.4
BcaB03g12647 Brassica carinata HOM05D004507 ORTHO05D004874 2.8e-31 139.4 184 48.4
HanXRQChr03g0066301 Helianthus annuus HOM05D004507 ORTHO05D004874 2.8e-31 139.4 163 52.1
A01p07760 Brassica napus HOM05D004507 ORTHO05D004874 3.6e-31 139.0 184 47.8
BraA01t00720Z Brassica rapa HOM05D004507 ORTHO05D004874 3.6e-31 139.0 184 47.8
MSTRG.10721 Avicennia marina HOM05D004507 ORTHO05D004874 4.8e-31 138.7 176 50.6
SGA_v2.0_scaffold69G23313 Striga asiatica HOM05D004507 ORTHO05D004874 4.8e-31 138.7 186 47.8
BcaNung02991 Brassica carinata HOM05D004507 ORTHO05D004874 8.1e-31 137.9 184 47.8
CARHR238310 Cardamine hirsuta HOM05D004507 ORTHO05D004874 8.1e-31 137.9 184 47.8
C01p08650 Brassica napus HOM05D004507 ORTHO05D004874 1.1e-30 137.5 184 47.3
AUR62028409 Chenopodium quinoa HOM05D004507 ORTHO05D004874 1.1e-30 137.5 157 51.6
A08p19250 Brassica napus HOM05D004507 ORTHO05D004874 1.4e-30 137.1 182 48.4
BraA08t33886Z Brassica rapa HOM05D004507 ORTHO05D004874 1.4e-30 137.1 182 48.4
MSTRG.19674 Avicennia marina HOM05D004507 ORTHO05D004874 2.4e-30 136.3 184 46.2
MD13G1260000 Malus domestica HOM05D004507 ORTHO05D004874 4.0e-30 135.6 167 52.1
BcaC01g01152 Brassica carinata HOM05D004507 ORTHO05D004874 5.3e-30 135.2 184 46.7
C03p88720 Brassica napus HOM05D004507 ORTHO05D004874 5.3e-30 135.2 184 46.7
BolC3t21183H Brassica oleracea HOM05D004507 ORTHO05D004874 6.9e-30 134.8 184 46.7
BcaC09g51830 Brassica carinata HOM05D004507 ORTHO05D004874 9.0e-30 134.4 184 46.7
BolC1t00847H Brassica oleracea HOM05D004507 ORTHO05D004874 9.0e-30 134.4 184 46.7
HanXRQChr12g0358031 Helianthus annuus HOM05D004507 ORTHO05D004874 1.5e-29 133.7 164 50.6
Medtr4g129560 Medicago truncatula HOM05D004507 ORTHO05D004874 3.4e-29 132.5 186 46.8
arahy.Tifrunner.gnm1.ann1.RZ4SGF Arachis hypogaea HOM05D004507 ORTHO05D004874 5.8e-29 131.7 185 46.5
THA.LOC104803927 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 5.8e-29 131.7 194 44.3
arahy.Tifrunner.gnm1.ann1.40EERC Arachis hypogaea HOM05D004507 ORTHO05D004874 9.9e-29 131.0 185 46.5
MD16G1262200 Malus domestica HOM05D004507 ORTHO05D004874 1.7e-28 130.2 167 51.5
Aa31LG2G20120 Aethionema arabicum HOM05D004507 ORTHO05D004874 2.2e-28 129.8 196 43.4
ATR0580G302 Amborella trichopoda HOM05D004507 ORTHO05D004874 2.3e-25 119.8 179 41.3
CDE05G1486 Ceratophyllum demersum HOM05D004507 ORTHO05D004874 3.0e-25 119.4 165 46.7
CDE02G1288 Ceratophyllum demersum HOM05D004507 ORTHO05D004874 1.5e-24 117.1 163 45.4
AT5G57780 Arabidopsis thaliana HOM05D004507 ORTHO05D004874 5.6e-24 115.2 189 43.4
MELO3C004096.2 Cucumis melo HOM05D004507 ORTHO05D004874 7.4e-24 114.8 177 42.9
THA.LOC104817812 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 1.3e-23 114.0 172 41.3
CsaV3_2G007890 Cucumis sativus L. HOM05D004507 ORTHO05D004874 1.6e-23 113.6 188 42.6
GSVIVG01023743001 Vitis vinifera HOM05D004507 ORTHO05D004874 4.8e-23 112.1 123 53.7
Sed0015365 Sechium edule HOM05D004507 ORTHO05D004874 6.2e-23 111.7 175 45.1
Lalb_Chr07g0180071 Lupinus albus HOM05D004507 ORTHO05D004874 8.1e-23 111.3 186 40.3
Sed0016375 Sechium edule HOM05D004507 ORTHO05D004874 1.1e-22 110.9 192 40.1
Cc06_g14060 Coffea canephora HOM05D004507 ORTHO05D004874 9.0e-22 107.8 183 39.9
BcaB08g36143 Brassica carinata HOM05D004507 ORTHO05D004874 9.9e-21 104.4 182 41.2
SHI49167 Sapria himalayana HOM05D004507 ORTHO05D004874 9.9e-21 104.4 178 39.3
Thhalv10014877m.g Eutrema salsugineum HOM05D004507 ORTHO05D004874 1.3e-20 104.0 183 43.7
CARHR271510 Cardamine hirsuta HOM05D004507 ORTHO05D004874 2.2e-20 103.2 182 39.6
AL8G33810 Arabidopsis lyrata HOM05D004507 ORTHO05D004874 3.8e-20 102.4 181 40.3
Carub.0008s1829 Capsella rubella HOM05D004507 ORTHO05D004874 3.8e-20 102.4 177 41.2
BcaC04g19929 Brassica carinata HOM05D004507 ORTHO05D004874 3.2e-19 99.4 181 39.2
BolC9t57818H Brassica oleracea HOM05D004507 ORTHO05D004874 3.2e-19 99.4 181 39.2
A10p15150 Brassica napus HOM05D004507 ORTHO05D004874 4.2e-19 99.0 182 41.8
BraA10t43598Z Brassica rapa HOM05D004507 ORTHO05D004874 4.2e-19 99.0 182 41.8
Sp6g19460 Schrenkiella parvula HOM05D004507 ORTHO05D004874 5.5e-19 98.6 182 39.6
unitig_62.g23492 Utricularia gibba HOM05D004507 ORTHO05D004874 1.6e-18 97.1 184 40.2
C09p49660 Brassica napus HOM05D004507 ORTHO05D004874 2.1e-18 96.7 182 41.8
CANSAT11G0203 Cannabis sativa HOM05D004507 ORTHO05D004874 4.3e-16 89.0 189 34.9
Zm00001eb412560 Zea mays HOM05D004507 ORTHO05D004874 4.3e-16 89.0 194 33.0
SEGI_26334 Sequoiadendron giganteum HOM05D000047 ORTHO05D000044 1.8e-14 83.6 184 32.1
Os02g0791300 Oryza sativa ssp. japonica HOM05D004507 ORTHO05D004874 4.5e-13 79.0 192 32.3
Os02g0178700 Oryza sativa ssp. japonica HOM05D004507 ORTHO05D004874 5.8e-13 78.6 184 31.5
ClCG11G012600 Citrullus lanatus HOM05D004507 ORTHO05D004874 1.0e-12 77.8 143 38.5
Solyc07g006310.1 Solanum lycopersicum HOM05D004507 ORTHO05D004874 4.9e-12 75.5 47 78.7
SEGI_39312 Sequoiadendron giganteum HOM05D004507 ORTHO05D004874 1.9e-11 73.6 183 31.7
SalBow1G3357 Salvia bowleyana HOM05D004507 ORTHO05D004874 3.2e-11 72.8 114 39.5
Zm00001eb389070 Zea mays HOM05D004507 ORTHO05D004874 9.3e-11 71.2 187 31.6
SEGI_25117 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 2.1e-10 70.1 198 33.3
SEGI_14977 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 3.5e-10 69.3 193 34.2
SEGI_03314 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 7.9e-10 68.2 153 36.6
CDE02G3054 Ceratophyllum demersum HOM05D001966 ORTHO05D011119 6.7e-09 65.1 88 39.8
Gohir.A11G142700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 8.7e-09 64.7 186 30.1
SEGI_00160 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 2.5e-08 63.2 161 36.0
unitig_37.g12687 Utricularia gibba HOM05D004507 ORTHO05D004874 3.3e-08 62.8 82 42.7
BcaB01g04486 Brassica carinata HOM05D004507 ORTHO05D004874 9.7e-08 61.2 97 39.2
SHI24757 Sapria himalayana HOM05D004507 ORTHO05D004874 1.6e-07 60.5 66 50.0
SEGI_00453 Sequoiadendron giganteum HOM05D001624 ORTHO05D001530 1.6e-07 60.5 164 29.9
Gohir.D11G149000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 6.3e-07 58.5 186 28.5
Zm00001eb178020 Zea mays HOM05D004507 ORTHO05D004874 6.3e-07 58.5 183 25.1
Gorai.007G159800 Gossypium raimondii HOM05D005211 ORTHO05D006148 1.1e-06 57.8 186 28.5
Os06g0653200 Oryza sativa ssp. japonica HOM05D004507 ORTHO05D004874 1.1e-06 57.8 160 30.0
SEGI_30051 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 1.1e-06 57.8 174 32.2
SEGI_22868 Sequoiadendron giganteum HOM05D001624 ORTHO05D001530 1.4e-06 57.4 182 26.4
Zm00001eb192600 Zea mays HOM05D004507 ORTHO05D004874 1.4e-06 57.4 174 31.0
SHI24759 Sapria himalayana HOM05D016562 ORTHO05D004874 1.8e-06 57.0 41 63.4
SEGI_10463 Sequoiadendron giganteum HOM05D058585 ORTHO05D050936 1.8e-06 57.0 170 32.9
Zm00001eb233860 Zea mays HOM05D004507 ORTHO05D004874 1.8e-06 57.0 193 27.5
FvH4_2g17750 Fragaria vesca HOM05D005211 ORTHO05D006148 4.1e-06 55.8 188 26.6
FAN24G3081 Fragaria x ananassa HOM05D005211 ORTHO05D006148 4.1e-06 55.8 188 26.6
SEGI_10087 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 5.3e-06 55.5 190 30.0
AL4G41710 Arabidopsis lyrata HOM05D005211 ORTHO05D006148 6.9e-06 55.1 149 31.5
Duzib138G1875 Durio zibethinus HOM05D005211 ORTHO05D006148 9.0e-06 54.7 182 29.7
SEGI_19253 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 9.0e-06 54.7 144 33.3
SEGI_31432 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 9.0e-06 54.7 144 33.3


User provided reference genes

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