Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42785 Davidia involucrata HOM05D005919 ORTHO05D007176 2.0e-200 702.2 347 100.0
Dinv43316 Davidia involucrata HOM05D005919 ORTHO05D007176 7.0e-198 693.7 343 99.7
CSS0021645 Camellia sinensis var. sinensis HOM05D005919 ORTHO05D007176 5.1e-164 581.3 343 81.3
GSVIVG01023723001 Vitis vinifera HOM05D005919 ORTHO05D007176 1.6e-162 576.2 343 80.2
Hma1.2p1_1531F.1_g289233 Hydrangea macrophylla HOM05D005919 ORTHO05D007176 5.8e-160 567.8 334 81.4
Actinidia02641 Actinidia chinensis HOM05D005919 ORTHO05D007176 1.7e-159 566.2 343 81.3
Rhsim01G0012200 Rhododendron simsii HOM05D005919 ORTHO05D007176 4.9e-159 564.7 343 79.3
TAR383G0301 Trochodendron aralioides HOM05D005919 ORTHO05D007176 4.2e-158 561.6 343 78.7
QL02p095651 Quercus lobata HOM05D005919 ORTHO05D007176 1.8e-153 546.2 328 79.9
Prupe.1G097400 Prunus persica HOM05D005919 ORTHO05D007176 9.0e-153 543.9 347 75.5
Lj9A728G22 Lonicera japonica HOM05D005919 ORTHO05D007176 1.7e-151 539.7 369 73.2
Ciclev10007971m.g Citrus clementina HOM05D005919 ORTHO05D007176 8.4e-151 537.3 324 78.7
RcHm_v2.0_Chr4g0404951 Rosa chinensis HOM05D005919 ORTHO05D007176 8.4e-151 537.3 347 74.4
Haze_22168 Corylus avellana HOM05D005919 ORTHO05D007176 9.3e-150 533.9 344 76.7
Atru.chr7.495 Acer truncatum HOM05D005919 ORTHO05D007176 1.2e-149 533.5 317 79.2
Potri.018G098700 Populus trichocarpa HOM05D005919 ORTHO05D007176 1.2e-149 533.5 346 74.6
Cfa013547 Carpinus fangiana HOM05D005919 ORTHO05D007176 7.9e-149 530.8 345 76.8
CANSAT11G0901 Cannabis sativa HOM05D005919 ORTHO05D007176 1.8e-148 529.6 343 74.6
MD16G1262500 Malus domestica HOM05D005919 ORTHO05D007176 3.3e-147 525.4 347 72.3
Manes.15G095400 Manihot esculenta HOM05D005919 ORTHO05D007176 4.3e-147 525.0 347 75.2
Duzib150G0612 Durio zibethinus HOM05D005919 ORTHO05D007176 9.7e-147 523.9 343 74.9
Cc06_g14010 Coffea canephora HOM05D005919 ORTHO05D007176 6.3e-146 521.2 350 70.9
HanXRQChr09g0244361 Helianthus annuus HOM05D005919 ORTHO05D007176 8.2e-146 520.8 343 70.8
FAN12G0251 Fragaria x ananassa HOM05D005919 ORTHO05D007176 1.4e-145 520.0 346 71.4
Thecc.09G160900 Theobroma cacao HOM05D005919 ORTHO05D007176 1.8e-145 519.6 343 74.3
FAN17G2955 Fragaria x ananassa HOM05D005919 ORTHO05D007176 9.0e-145 517.3 353 71.1
Nn2g12541 Nelumbo nucifera HOM05D005919 ORTHO05D007176 9.0e-145 517.3 343 74.3
FvH4_4g09660 Fragaria vesca HOM05D005919 ORTHO05D007176 1.2e-144 516.9 346 71.1
Medtr4g129500 Medicago truncatula HOM05D005919 ORTHO05D007176 1.5e-144 516.5 343 72.3
PGSC0003DMG401011224 Solanum tuberosum HOM05D005919 ORTHO05D007176 1.5e-144 516.5 345 71.9
VMungo1215G1350 Vigna mungo HOM05D005919 ORTHO05D007176 1.5e-144 516.5 343 72.3
CAN.G1870.2 Capsicum annuum HOM05D005919 ORTHO05D007176 3.4e-144 515.4 346 70.5
Glyma.13G091700 Glycine max HOM05D005919 ORTHO05D007176 4.5e-144 515.0 343 72.0
PSO063G4858 Papaver somniferum HOM05D005919 ORTHO05D007176 1.0e-143 513.8 344 70.6
FAN12G4285 Fragaria x ananassa HOM05D005919 ORTHO05D007176 2.2e-143 512.7 353 69.7
Psat4g048080 Pisum sativum HOM05D005919 ORTHO05D007176 3.8e-143 511.9 344 71.5
Solyc07g006330.2 Solanum lycopersicum HOM05D005919 ORTHO05D007176 3.8e-143 511.9 345 71.6
Eucgr.C00228 Eucalyptus grandis HOM05D005919 ORTHO05D007176 1.4e-142 510.0 343 72.6
Phvul.003G151000 Phaseolus vulgaris HOM05D005919 ORTHO05D007176 1.4e-142 510.0 343 70.8
Gohir.A06G079400 Gossypium hirsutum HOM05D005919 ORTHO05D007176 3.2e-142 508.8 343 73.5
PGR042G2595 Punica granatum HOM05D005919 ORTHO05D007176 4.2e-142 508.4 345 73.9
Gorai.010G092100 Gossypium raimondii HOM05D005919 ORTHO05D007176 5.5e-142 508.1 342 73.4
Lsat_1_v5_gn_7_51941 Lactuca sativa HOM05D005919 ORTHO05D007176 7.2e-142 507.7 343 71.1
Cpa.g.sc42.125 Carica papaya HOM05D005919 ORTHO05D007176 9.4e-142 507.3 343 72.3
AUR62013597 Chenopodium quinoa HOM05D005919 ORTHO05D007176 3.6e-141 505.4 343 70.3
ECA240G3021 Erigeron canadensis HOM05D005919 ORTHO05D007176 1.4e-140 503.4 344 70.6
FAN22G0736 Fragaria x ananassa HOM05D005919 ORTHO05D007176 2.3e-140 502.7 360 68.9
Migut.K00275 Erythranthe guttata HOM05D005919 ORTHO05D007176 3.0e-140 502.3 343 70.6
Aqoxy7G03239_Aqoxy7G03240 Aquilegia oxysepala HOM05D005919 ORTHO05D007176 3.9e-140 501.9 344 71.8
ClCG09G013740 Citrullus lanatus HOM05D005919 ORTHO05D007176 5.1e-140 501.5 347 70.0
Lalb_Chr12g0199061 Lupinus albus HOM05D005919 ORTHO05D007176 5.1e-140 501.5 342 71.6
TPR.G5290 Trifolium pratense HOM05D005919 ORTHO05D007176 6.7e-140 501.1 331 73.1
TWI53G0694 Tripterygium wilfordii HOM05D005919 ORTHO05D007176 6.7e-140 501.1 345 71.0
EL10Ac1g01561 Beta vulgaris HOM05D005919 ORTHO05D007176 1.5e-139 500.0 343 68.8
Lj4g0016840 Lotus japonicus HOM05D005919 ORTHO05D007176 9.7e-139 497.3 317 74.4
Sc02g0003990 Simmondsia chinensis HOM05D005919 ORTHO05D007176 1.7e-138 496.5 343 70.8
SGA_v2.0_scaffold7G04062 Striga asiatica HOM05D005919 ORTHO05D007176 1.7e-138 496.5 343 69.1
MSTRG.26243 Avicennia marina HOM05D005919 ORTHO05D007176 2.2e-138 496.1 304 76.0
arahy.Tifrunner.gnm1.ann1.7FR1J2 Arachis hypogaea HOM05D005919 ORTHO05D007176 4.8e-138 495.0 342 71.3
arahy.Tifrunner.gnm1.ann1.L1AVC7 Arachis hypogaea HOM05D005919 ORTHO05D007176 4.8e-138 495.0 342 71.3
Sed0019098 Sechium edule HOM05D005919 ORTHO05D007176 8.2e-138 494.2 342 68.4
arahy.Tifrunner.gnm1.ann1.KJ1SMN Arachis hypogaea HOM05D005919 ORTHO05D007176 1.4e-137 493.4 342 71.1
CsaV3_1G028860 Cucumis sativus L. HOM05D005919 ORTHO05D007176 4.1e-137 491.9 326 70.9
Ca_21183_v3 Cicer arietinum L. HOM05D005919 ORTHO05D007176 2.0e-136 489.6 294 77.2
SHI02981 Sapria himalayana HOM05D005919 ORTHO05D007176 2.6e-136 489.2 312 74.4
Nitab4.5_0005985g0040 Nicotiana tabacum HOM05D005919 ORTHO05D007176 3.4e-136 488.8 359 66.6
Nitab4.5_0005551g0020 Nicotiana tabacum HOM05D005919 ORTHO05D007176 5.9e-136 488.0 359 67.1
MELO3C005285.2 Cucumis melo HOM05D005919 ORTHO05D007176 1.4e-134 483.4 327 70.0
Oeu035674.1 Olea europaea HOM05D005919 ORTHO05D007176 2.1e-133 479.6 347 69.2
Aa31LG11G14640 Aethionema arabicum HOM05D005919 ORTHO05D007176 2.7e-133 479.2 342 67.8
C02p07360 Brassica napus HOM05D005919 ORTHO05D007176 2.7e-133 479.2 312 72.4
BolC2t06667H Brassica oleracea HOM05D005919 ORTHO05D007176 2.7e-133 479.2 312 72.4
AT5G14850 Arabidopsis thaliana HOM05D005919 ORTHO05D007176 1.0e-132 477.2 343 66.8
arahy.Tifrunner.gnm1.ann1.F7IW15 Arachis hypogaea HOM05D005919 ORTHO05D007176 1.0e-132 477.2 342 69.0
BcaC03g13443 Brassica carinata HOM05D005919 ORTHO05D007176 1.8e-132 476.5 343 67.9
BraA02t05246Z Brassica rapa HOM05D005919 ORTHO05D007176 5.1e-132 474.9 351 66.7
THA.LOC104819083 Tarenaya hassleriana HOM05D005919 ORTHO05D007176 5.1e-132 474.9 345 66.4
BcaNung03092 Brassica carinata HOM05D005919 ORTHO05D007176 8.8e-132 474.2 307 72.6
CDE02G0068 Ceratophyllum demersum HOM05D005919 ORTHO05D007176 8.8e-132 474.2 333 68.2
A02p02750 Brassica napus HOM05D005919 ORTHO05D007176 1.1e-131 473.8 306 72.9
Carub.0006s1300 Capsella rubella HOM05D005919 ORTHO05D007176 1.1e-131 473.8 347 65.1
Sp6g29230 Schrenkiella parvula HOM05D005919 ORTHO05D007176 5.7e-131 471.5 310 71.6
AL6G25620 Arabidopsis lyrata HOM05D005919 ORTHO05D007176 6.3e-130 468.0 344 65.4
Thhalv10013155m.g Eutrema salsugineum HOM05D005919 ORTHO05D007176 1.1e-129 467.2 313 70.3
ATR0824G006 Amborella trichopoda HOM05D005919 ORTHO05D007176 1.8e-129 466.5 312 69.9
arahy.Tifrunner.gnm1.ann1.WJA0QS Arachis hypogaea HOM05D005919 ORTHO05D007176 4.1e-129 465.3 294 75.2
Peaxi162Scf00525g00821 Petunia axillaris HOM05D005919 ORTHO05D007176 1.6e-125 453.4 345 65.5
HPP92_021127 Vanilla planifolia HOM05D005919 ORTHO05D007176 1.3e-122 443.7 342 62.6
Os01g0580100 Oryza sativa ssp. japonica HOM05D005919 ORTHO05D007176 9.1e-121 437.6 336 63.1
Zm00001eb229730 Zea mays HOM05D005919 ORTHO05D007176 8.5e-119 431.0 319 64.6
Dinv41305 Davidia involucrata HOM05D005919 ORTHO05D007176 2.5e-118 429.5 226 93.4
PSO782G2448 Papaver somniferum HOM05D005919 ORTHO05D007176 4.2e-118 428.7 265 74.3
Mapoly0152s0016 Marchantia polymorpha HOM05D005919 ORTHO05D007176 5.9e-112 408.3 324 58.6
vmacro13072 Vaccinium macrocarpon HOM05D005919 ORTHO05D007176 8.0e-109 397.9 314 67.8
Pp3c10_23620 Physcomitrium patens HOM05D005919 ORTHO05D007176 2.3e-108 396.4 308 60.7
Pp3c10_23630 Physcomitrium patens HOM05D005919 ORTHO05D007176 2.3e-108 396.4 308 60.7
SMO172G0226 Selaginella moellendorffii HOM05D005919 ORTHO05D007176 5.2e-108 395.2 303 58.4
SalBow1G6099 Salvia bowleyana HOM05D005919 ORTHO05D007176 2.6e-107 392.9 256 71.1
Hund26692 Selenicereus undatus HOM05D005919 ORTHO05D007176 1.7e-103 380.2 412 50.0
Hma1.2p1_1531F.1_g289236 Hydrangea macrophylla HOM05D005919 ORTHO05D007176 1.9e-102 376.7 224 82.6
DCAR_011759 Daucus carota HOM05D005919 ORTHO05D007176 2.1e-101 373.2 222 81.1
arahy.Tifrunner.gnm1.ann1.IETZ0A Arachis hypogaea HOM05D005919 ORTHO05D007176 5.6e-86 322.0 247 67.2
Zm00001eb229670 Zea mays HOM05D005919 ORTHO05D007176 3.6e-85 319.3 245 62.9
FAN07G1390 Fragaria x ananassa HOM05D005919 ORTHO05D007176 1.2e-83 314.3 281 59.4
CiPaw.07G186600 Carya illinoinensis HOM05D005919 ORTHO05D007176 1.3e-82 310.8 182 81.3
Oeu031853.1 Olea europaea HOM05D005919 ORTHO05D007176 3.2e-81 306.2 198 74.7
Sopen07g002420 Solanum pennellii HOM05D005919 ORTHO05D007176 8.6e-79 298.1 182 77.5
CARHR198500 Cardamine hirsuta HOM05D005919 ORTHO05D007176 1.9e-73 280.4 182 74.2
SGA_v2.0_scaffold87G27166 Striga asiatica HOM05D005919 ORTHO05D007176 1.4e-68 264.2 343 46.4
MCO09G503 Micromonas commoda HOM05D005919 ORTHO05D007176 2.6e-67 260.0 324 39.8
Gohir.D06G079000 Gossypium hirsutum HOM05D005919 ORTHO05D007176 1.2e-56 224.6 343 42.0
Actinidia20955 Actinidia chinensis HOM05D005919 ORTHO05D007176 8.7e-55 218.4 135 77.8
AUR62026693 Chenopodium quinoa HOM05D005919 ORTHO05D007176 4.0e-52 209.5 153 64.7
Glyma.17G068633 Glycine max HOM05D005919 ORTHO05D007176 1.2e-51 208.0 160 64.4
Psat4g010400 Pisum sativum HOM05D005919 ORTHO05D007176 4.3e-46 189.5 147 63.9
MD13G1260800 Malus domestica HOM05D005919 ORTHO05D007176 4.2e-41 172.9 225 44.9
COL.COLO4_04535 Corchorus olitorius HOM05D005919 ORTHO05D007176 6.9e-36 155.6 85 80.0
DCAR_017944 Daucus carota HOM05D005919 ORTHO05D007176 2.3e-31 140.6 133 57.9
Rhsim01G0011300 Rhododendron simsii HOM05D005919 ORTHO05D007176 4.5e-27 126.3 75 76.0
PRCOL_00000120 Prasinoderma coloniale HOM05D000722 ORTHO05D007176 4.2e-25 119.8 288 30.6
Psat4g048040 Pisum sativum HOM05D005919 ORTHO05D007176 2.6e-11 73.9 79 53.2
TWI38G1600 Tripterygium wilfordii HOM05D005597 ORTHO05D007304 7.2e-09 65.9 298 28.5
arahy.Tifrunner.gnm1.ann1.I3IQB6 Arachis hypogaea HOM05D005919 ORTHO05D007176 9.4e-09 65.5 42 64.3
SMO145G0125 Selaginella moellendorffii HOM05D009274 ORTHO05D011512 3.6e-08 63.5 89 46.1
PGR083G2138 Punica granatum HOM05D005597 ORTHO05D007304 4.4e-06 56.6 295 27.1
FAN11G3052 Fragaria x ananassa HOM05D005597 ORTHO05D007304 7.5e-06 55.8 354 24.6
Sc03g0010510 Simmondsia chinensis HOM05D005597 ORTHO05D007304 7.5e-06 55.8 297 27.3


User provided reference genes

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