Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42695 Davidia involucrata HOM05D006985 ORTHO05D008749 9.6e-99 363.6 199 100.0
CSS0005033 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 7.9e-69 264.2 187 76.5
CSS0027796 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 1.1e-67 260.4 186 75.8
Actinidia28892 Actinidia chinensis HOM05D006985 ORTHO05D008749 9.7e-67 257.3 189 76.2
Lj2A564T40 Lonicera japonica HOM05D006985 ORTHO05D008749 3.7e-66 255.4 195 72.8
GSVIVG01022222001 Vitis vinifera HOM05D006985 ORTHO05D008749 7.7e-64 247.7 194 72.7
Rhsim10G0013600 Rhododendron simsii HOM05D006985 ORTHO05D008749 2.9e-63 245.7 194 72.7
TAR625G1052 Trochodendron aralioides HOM05D006985 ORTHO05D008749 3.8e-63 245.4 191 71.7
Rhsim08G0007300 Rhododendron simsii HOM05D006985 ORTHO05D008749 9.4e-62 240.7 191 72.8
Hma1.2p1_0375F.1_g138690 Hydrangea macrophylla HOM05D006985 ORTHO05D008749 1.6e-61 240.0 183 71.0
Nn5g28916 Nelumbo nucifera HOM05D006985 ORTHO05D008749 6.1e-61 238.0 191 67.0
Rhsim08G0006600 Rhododendron simsii HOM05D006985 ORTHO05D008749 6.1e-61 238.0 191 72.3
CAN.G276.1 Capsicum annuum HOM05D006985 ORTHO05D008749 5.1e-60 235.0 192 68.8
Peaxi162Scf00323g00052 Petunia axillaris HOM05D006985 ORTHO05D008749 8.8e-60 234.2 192 69.8
Nitab4.5_0000471g0030 Nicotiana tabacum HOM05D006985 ORTHO05D008749 2.0e-59 233.0 192 69.3
Oeu028373.1 Olea europaea HOM05D006985 ORTHO05D008749 3.3e-59 232.3 192 66.7
Cfa002750 Carpinus fangiana HOM05D006985 ORTHO05D008749 4.4e-59 231.9 199 64.8
ECA238G4202 Erigeron canadensis HOM05D006985 ORTHO05D008749 9.7e-59 230.7 197 67.0
Manes.12G142400 Manihot esculenta HOM05D006985 ORTHO05D008749 1.3e-58 230.3 194 66.5
QL06p032211 Quercus lobata HOM05D006985 ORTHO05D008749 1.3e-58 230.3 199 66.8
Lsat_1_v5_gn_2_67381 Lactuca sativa HOM05D006985 ORTHO05D008749 4.8e-58 228.4 199 65.8
Oeu030683.1 Olea europaea HOM05D006985 ORTHO05D008749 6.3e-58 228.0 190 65.3
Sabra05G0069300 Salix brachista HOM05D006985 ORTHO05D008749 1.1e-57 227.3 197 66.0
Glyma.05G183500 Glycine max HOM05D006985 ORTHO05D008749 1.4e-57 226.9 189 65.6
Duzib147G0418 Durio zibethinus HOM05D006985 ORTHO05D008749 2.4e-57 226.1 202 63.9
PGSC0003DMG400016590 Solanum tuberosum HOM05D006985 ORTHO05D008749 2.4e-57 226.1 192 67.2
Cc07_g16120 Coffea canephora HOM05D006985 ORTHO05D008749 4.1e-57 225.3 205 62.4
Glyma.08G141300 Glycine max HOM05D006985 ORTHO05D008749 5.3e-57 224.9 200 63.0
TWI53G2009 Tripterygium wilfordii HOM05D006985 ORTHO05D008749 6.9e-57 224.6 193 68.9
Solyc04g053130.4 Solanum lycopersicum HOM05D006985 ORTHO05D008749 1.2e-56 223.8 192 66.1
Sopen04g023520 Solanum pennellii HOM05D006985 ORTHO05D008749 1.5e-56 223.4 192 66.1
arahy.Tifrunner.gnm1.ann1.7DG6XK Arachis hypogaea HOM05D006985 ORTHO05D008749 3.4e-56 222.2 195 63.1
Potri.005G084200 Populus trichocarpa HOM05D006985 ORTHO05D008749 3.4e-56 222.2 201 65.2
Lalb_Chr13g0296201 Lupinus albus HOM05D006985 ORTHO05D008749 5.9e-56 221.5 196 63.8
Thecc.01G112400 Theobroma cacao HOM05D006985 ORTHO05D008749 5.9e-56 221.5 198 63.6
Haze_25036 Corylus avellana HOM05D006985 ORTHO05D008749 7.7e-56 221.1 199 62.8
DCAR_010078 Daucus carota HOM05D006985 ORTHO05D008749 7.7e-56 221.1 186 65.1
arahy.Tifrunner.gnm1.ann1.MHK3H7 Arachis hypogaea HOM05D006985 ORTHO05D008749 1.3e-55 220.3 195 62.6
Phvul.002G264600 Phaseolus vulgaris HOM05D006985 ORTHO05D008749 3.8e-55 218.8 200 62.0
PGR004G1495 Punica granatum HOM05D006985 ORTHO05D008749 6.5e-55 218.0 204 60.8
vmacro18630 Vaccinium macrocarpon HOM05D006985 ORTHO05D008749 6.5e-55 218.0 200 61.5
COL.COLO4_11016 Corchorus olitorius HOM05D006985 ORTHO05D008749 1.1e-54 217.2 196 64.8
CiPaw.04G092100 Carya illinoinensis HOM05D006985 ORTHO05D008749 1.4e-54 216.9 193 63.2
HanXRQChr14g0446291 Helianthus annuus HOM05D006985 ORTHO05D008749 1.4e-54 216.9 199 62.8
VMungo0251G1437 Vigna mungo HOM05D006985 ORTHO05D008749 1.4e-54 216.9 204 61.3
Gohir.A02G134801 Gossypium hirsutum HOM05D006985 ORTHO05D008749 1.9e-54 216.5 196 63.3
Eucgr.I00326 Eucalyptus grandis HOM05D006985 ORTHO05D008749 4.2e-54 215.3 198 62.6
Gohir.D03G045800 Gossypium hirsutum HOM05D006985 ORTHO05D008749 5.5e-54 214.9 196 62.8
Gorai.003G047000 Gossypium raimondii HOM05D006985 ORTHO05D008749 5.5e-54 214.9 196 62.8
ClCG01G016160 Citrullus lanatus HOM05D006985 ORTHO05D008749 1.2e-53 213.8 190 65.3
MBI02_g45734_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 1.6e-53 213.4 187 61.5
MELO3C007486.2 Cucumis melo HOM05D006985 ORTHO05D008749 4.7e-53 211.8 188 63.8
MD15G1333400 Malus domestica HOM05D006985 ORTHO05D008749 1.4e-52 210.3 193 62.2
Sc16g0004160 Simmondsia chinensis HOM05D006985 ORTHO05D008749 5.2e-52 208.4 187 63.1
CANSAT01G0007 Cannabis sativa HOM05D006985 ORTHO05D008749 6.7e-52 208.0 198 60.6
Duzib187G0142 Durio zibethinus HOM05D006985 ORTHO05D008749 8.8e-52 207.6 201 61.7
MSTRG.23313 Avicennia marina HOM05D006985 ORTHO05D008749 2.6e-51 206.1 186 61.3
CsaV3_6G042430 Cucumis sativus L. HOM05D006985 ORTHO05D008749 5.7e-51 204.9 188 61.7
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 5.7e-51 204.9 139 81.3
THA.LOC104804144 Tarenaya hassleriana HOM05D006985 ORTHO05D008749 5.7e-51 204.9 198 58.6
AL4G11290 Arabidopsis lyrata HOM05D006985 ORTHO05D008749 2.2e-50 203.0 197 57.4
Ciclev10026526m.g Citrus clementina HOM05D006985 ORTHO05D008749 2.8e-50 202.6 199 58.8
Lj4g0016816 Lotus japonicus HOM05D006985 ORTHO05D008749 2.8e-50 202.6 197 59.4
Sed0020932 Sechium edule HOM05D006985 ORTHO05D008749 2.8e-50 202.6 175 65.1
MBI02_g20708_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 4.8e-50 201.8 174 62.6
Psat7g051440 Pisum sativum HOM05D006985 ORTHO05D008749 1.1e-49 200.7 196 60.2
Sp4g01050 Schrenkiella parvula HOM05D006985 ORTHO05D008749 1.1e-49 200.7 198 57.1
A09p57880 Brassica napus HOM05D006985 ORTHO05D008749 1.4e-49 200.3 198 56.6
C08p41110 Brassica napus HOM05D006985 ORTHO05D008749 1.4e-49 200.3 198 56.6
BolC8t51677H Brassica oleracea HOM05D006985 ORTHO05D008749 1.4e-49 200.3 198 56.6
BraA09t41180Z Brassica rapa HOM05D006985 ORTHO05D008749 1.4e-49 200.3 198 56.6
Atru.chr4.358 Acer truncatum HOM05D006985 ORTHO05D008749 1.8e-49 199.9 198 60.1
AT2G21970 Arabidopsis thaliana HOM05D006985 ORTHO05D008749 3.1e-49 199.1 197 57.9
BcaC07g41109 Brassica carinata HOM05D006985 ORTHO05D008749 3.1e-49 199.1 198 56.1
FvH4_1g22220 Fragaria vesca HOM05D006985 ORTHO05D008749 4.1e-49 198.7 197 60.4
Carub.0004s0111 Capsella rubella HOM05D006985 ORTHO05D008749 5.3e-49 198.4 169 67.5
Ca_17697_v3 Cicer arietinum L. HOM05D006985 ORTHO05D008749 5.3e-49 198.4 198 59.1
FAN23G1894 Fragaria x ananassa HOM05D006985 ORTHO05D008749 9.1e-49 197.6 197 60.4
SGA_v2.0_scaffold51G18747 Striga asiatica HOM05D006985 ORTHO05D008749 1.6e-48 196.8 190 56.8
BcaB08g35014 Brassica carinata HOM05D006985 ORTHO05D008749 2.0e-48 196.4 174 59.2
Prupe.6G173300 Prunus persica HOM05D006985 ORTHO05D008749 5.9e-48 194.9 196 56.6
Aqoxy5G01954 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 7.7e-48 194.5 186 57.5
SalBow6G7167 Salvia bowleyana HOM05D006985 ORTHO05D008749 2.2e-47 193.0 189 59.3
CDE02G4368 Ceratophyllum demersum HOM05D006985 ORTHO05D008749 3.8e-47 192.2 182 56.0
Cpa.g.sc196.10 Carica papaya HOM05D006985 ORTHO05D008749 5.0e-47 191.8 185 61.1
RcHm_v2.0_Chr2g0116361 Rosa chinensis HOM05D006985 ORTHO05D008749 5.0e-47 191.8 195 60.0
Aqoxy7G01607 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 1.5e-46 190.3 185 56.8
Migut.H02428 Erythranthe guttata HOM05D006985 ORTHO05D008749 7.2e-46 188.0 185 57.3
Thhalv10000325m.g Eutrema salsugineum HOM05D006985 ORTHO05D008749 9.4e-46 187.6 204 58.8
Hund03540 Selenicereus undatus HOM05D006985 ORTHO05D008749 6.1e-45 184.9 190 57.4
Ah.03g141710 Amaranthus hybridus HOM05D006985 ORTHO05D008749 1.4e-44 183.7 194 56.2
Zm00001eb431840 Zea mays HOM05D006985 ORTHO05D008749 1.4e-44 183.7 192 51.6
Aa31LG7G14690 Aethionema arabicum HOM05D006985 ORTHO05D008749 2.3e-44 183.0 194 55.7
AUR62003309 Chenopodium quinoa HOM05D006985 ORTHO05D008749 5.2e-44 181.8 196 54.6
Os04g0639200 Oryza sativa ssp. japonica HOM05D006985 ORTHO05D008749 6.7e-44 181.4 188 56.9
EL10Ac6g14751 Beta vulgaris HOM05D006985 ORTHO05D008749 8.8e-44 181.0 193 55.4
AUR62016276 Chenopodium quinoa HOM05D006985 ORTHO05D008749 1.5e-43 180.3 195 54.4
MSTRG.3810 Avicennia marina HOM05D006985 ORTHO05D008749 1.7e-42 176.8 148 63.5
PSO210G1005 Papaver somniferum HOM05D006985 ORTHO05D008749 5.9e-40 168.3 190 48.4
HPP92_013077 Vanilla planifolia HOM05D006985 ORTHO05D008749 3.2e-38 162.5 148 54.7
ATR0564G194 Amborella trichopoda HOM05D006985 ORTHO05D008749 9.4e-38 161.0 146 56.2
SEGI_00004 Sequoiadendron giganteum HOM05D006985 ORTHO05D008749 3.5e-32 142.5 148 49.3
PSO170G0586 Papaver somniferum HOM05D006985 ORTHO05D008749 1.2e-29 134.0 158 49.4
CARHR113060 Cardamine hirsuta HOM05D006985 ORTHO05D008749 4.4e-27 125.6 85 69.4
Hund19658 Selenicereus undatus HOM05D006985 ORTHO05D008749 1.6e-24 117.1 116 54.3
AagrBONN_evm.TU.Sc2ySwM_362.2621 Anthoceros agrestis HOM05D006985 ORTHO05D008749 3.7e-18 95.9 153 35.9
CBR_g770 Chara braunii HOM05D006985 ORTHO05D008749 1.2e-13 80.9 148 31.8
SMO356G0636 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 1.2e-13 80.9 141 30.5
CARHR113050 Cardamine hirsuta HOM05D006985 ORTHO05D008749 3.6e-13 79.3 115 43.5
SMO174G0105 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 3.6e-13 79.3 143 29.4
Mapoly0007s0046 Marchantia polymorpha HOM05D006985 ORTHO05D008749 1.1e-12 77.8 145 33.1
FAN26G1540 Fragaria x ananassa HOM05D000436 ORTHO05D000678 5.2e-12 75.5 118 48.3
unitig_88.g27736 Utricularia gibba HOM05D006985 ORTHO05D008749 3.4e-11 72.8 138 37.0
Pp3c16_13700 Physcomitrium patens HOM05D006985 ORTHO05D008749 3.7e-10 69.3 140 30.0
Pp3c27_3810 Physcomitrium patens HOM05D006985 ORTHO05D008749 3.2e-09 66.2 166 27.1
CDE08G1171 Ceratophyllum demersum HOM05D000290 ORTHO05D009072 1.2e-08 64.3 98 41.8


User provided reference genes

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