Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42620 Davidia involucrata HOM05D008012 ORTHO05D010154 6.4e-228 793.9 446 100.0
Dinv44854 Davidia involucrata HOM05D008012 ORTHO05D010154 2.9e-79 300.1 448 46.0
TAR628G1418 Trochodendron aralioides HOM05D008012 ORTHO05D010154 3.3e-67 260.0 449 38.8
CSS0008352 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 6.1e-61 239.2 428 40.9
Cfa013683 Carpinus fangiana HOM05D008012 ORTHO05D010154 1.8e-49 201.1 447 36.9
GSVIVG01009167001 Vitis vinifera HOM05D008012 ORTHO05D010154 1.1e-41 175.3 160 59.4
Rhsim06G0072100 Rhododendron simsii HOM05D008012 ORTHO05D010154 2.3e-39 167.5 135 62.2
vmacro21334 Vaccinium macrocarpon HOM05D008012 ORTHO05D010154 3.3e-38 163.7 144 61.8
Hma1.2p1_0125F.1_g058940 Hydrangea macrophylla HOM05D008012 ORTHO05D010154 2.8e-37 160.6 134 60.4
CiPaw.07G166200 Carya illinoinensis HOM05D008012 ORTHO05D010154 4.7e-37 159.8 450 32.0
Prupe.1G530900 Prunus persica HOM05D008012 ORTHO05D010154 4.7e-37 159.8 162 52.5
Cpa.g.sc21.9 Carica papaya HOM05D008012 ORTHO05D010154 9.2e-33 145.6 143 53.8
Duzib093G0747 Durio zibethinus HOM05D008012 ORTHO05D010154 4.6e-32 143.3 145 52.4
Gohir.A05G219900 Gossypium hirsutum HOM05D008012 ORTHO05D010154 2.3e-31 141.0 147 49.7
Gohir.D05G222500 Gossypium hirsutum HOM05D008012 ORTHO05D010154 2.3e-31 141.0 147 49.7
Gorai.009G229900 Gossypium raimondii HOM05D008012 ORTHO05D010154 2.3e-31 141.0 147 49.7
Atru.chr13.1021 Acer truncatum HOM05D008012 ORTHO05D010154 8.6e-31 139.0 160 48.8
Nn5g29899 Nelumbo nucifera HOM05D008012 ORTHO05D010154 8.6e-31 139.0 296 37.8
Thecc.08G070000 Theobroma cacao HOM05D008012 ORTHO05D010154 1.1e-30 138.7 465 30.5
CANSAT25G2577 Cannabis sativa HOM05D008012 ORTHO05D010154 1.5e-30 138.3 155 49.0
PGR031G3518 Punica granatum HOM05D052328 ORTHO05D010154 9.5e-30 135.6 443 28.0
Ciclev10002397m.g Citrus clementina HOM05D008012 ORTHO05D010154 2.8e-29 134.0 167 45.5
COL.COLO4_35233 Corchorus olitorius HOM05D008012 ORTHO05D010154 3.6e-29 133.7 215 41.4
Eucgr.F02139 Eucalyptus grandis HOM05D008012 ORTHO05D010154 8.1e-29 132.5 544 27.8
TWI56G1079 Tripterygium wilfordii HOM05D008012 ORTHO05D010154 1.4e-28 131.7 469 28.8
RcHm_v2.0_Chr7g0236831 Rosa chinensis HOM05D008012 ORTHO05D010154 2.3e-28 131.0 228 40.8
Aqoxy5G01307 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 5.2e-28 129.8 145 45.5
Lalb_Chr11g0065041 Lupinus albus HOM05D008012 ORTHO05D010154 8.9e-28 129.0 150 46.7
QL09p017632 Quercus lobata HOM05D008012 ORTHO05D010154 8.9e-28 129.0 195 41.0
Lj1g0025426 Lotus japonicus HOM05D008012 ORTHO05D010154 1.5e-27 128.3 151 49.7
Aqoxy6G01439 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 3.7e-26 123.6 132 48.5
MBI02_g32605_MAGBIO Magnolia biondii HOM05D008012 ORTHO05D010154 3.7e-26 123.6 163 46.6
Hund16860 Selenicereus undatus HOM05D008012 ORTHO05D010154 8.3e-26 122.5 130 46.9
Lalb_Chr23g0270051 Lupinus albus HOM05D008012 ORTHO05D010154 1.4e-25 121.7 153 43.1
EL10Ac1g01062 Beta vulgaris HOM05D008012 ORTHO05D010154 3.2e-25 120.6 140 43.6
Sc23g0000670 Simmondsia chinensis HOM05D008012 ORTHO05D010154 7.1e-25 119.4 142 43.7
Manes.18G059880 Manihot esculenta HOM05D008012 ORTHO05D010154 1.2e-24 118.6 189 39.2
Glyma.04G091500 Glycine max HOM05D008012 ORTHO05D010154 4.6e-24 116.7 164 40.2
FAN04G0544 Fragaria x ananassa HOM05D008012 ORTHO05D010154 1.7e-23 114.8 165 43.6
AUR62019041 Chenopodium quinoa HOM05D008012 ORTHO05D010154 3.0e-23 114.0 177 37.3
FvH4_5g35450 Fragaria vesca HOM05D008012 ORTHO05D010154 5.1e-23 113.2 165 43.6
FAN08G2109 Fragaria x ananassa HOM05D008012 ORTHO05D010154 5.1e-23 113.2 165 43.6
FAN18G1410 Fragaria x ananassa HOM05D008012 ORTHO05D010154 6.6e-23 112.8 165 43.6
Phvul.009G144400 Phaseolus vulgaris HOM05D008012 ORTHO05D010154 6.6e-23 112.8 166 38.6
HanXRQChr12g0378051 Helianthus annuus HOM05D008012 ORTHO05D010154 8.6e-23 112.5 165 41.8
CAN.G1215.11 Capsicum annuum HOM05D008012 ORTHO05D010154 1.1e-22 112.1 132 46.2
ECA232G0711 Erigeron canadensis HOM05D008012 ORTHO05D010154 3.3e-22 110.5 165 38.8
Lsat_1_v5_gn_9_75360 Lactuca sativa HOM05D008012 ORTHO05D010154 3.3e-22 110.5 105 51.4
Glyma.06G093300 Glycine max HOM05D008012 ORTHO05D010154 7.3e-22 109.4 165 37.0
VMungo1309G2208 Vigna mungo HOM05D008012 ORTHO05D010154 1.2e-21 108.6 93 52.7
Actinidia10381 Actinidia chinensis HOM05D000160 ORTHO05D001344 3.1e-20 104.0 79 63.3
CSS0015058 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 4.0e-20 103.6 73 69.9
HanXRQChr12g0378041 Helianthus annuus HOM05D008012 ORTHO05D010154 8.9e-20 102.4 134 45.5
CDE04G1170 Ceratophyllum demersum HOM05D008012 ORTHO05D010154 1.5e-19 101.7 97 46.4
Potri.005G156500 Populus trichocarpa HOM05D008012 ORTHO05D010154 1.5e-19 101.7 447 30.0
TPR.G26063 Trifolium pratense HOM05D008012 ORTHO05D010154 4.4e-19 100.1 99 48.5
Psat5g046360 Pisum sativum HOM05D008012 ORTHO05D010154 5.8e-19 99.8 162 40.1
arahy.Tifrunner.gnm1.ann1.S7389H Arachis hypogaea HOM05D008012 ORTHO05D010154 9.9e-19 99.0 129 43.4
ATR0665G245 Amborella trichopoda HOM05D008012 ORTHO05D010154 1.7e-18 98.2 150 40.0
Ca_15998_v3 Cicer arietinum L. HOM05D008012 ORTHO05D010154 1.4e-17 95.1 94 48.9
Zm00001eb038310 Zea mays HOM05D008012 ORTHO05D010154 1.2e-16 92.0 121 41.3
Medtr3g100460 Medicago truncatula HOM05D008012 ORTHO05D010154 7.8e-16 89.4 165 37.0
PSO017G0519 Papaver somniferum HOM05D008012 ORTHO05D010154 3.9e-15 87.0 302 28.1
Sabra05G0120100 Salix brachista HOM05D008012 ORTHO05D010154 5.1e-15 86.7 447 25.7
CSS0023045 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 1.2e-11 75.5 79 54.4
SEGI_09514 Sequoiadendron giganteum HOM05D008012 ORTHO05D010154 1.3e-10 72.0 84 42.9
Pp3c1_4500 Physcomitrium patens HOM05D008196 ORTHO05D010261 4.9e-10 70.1 100 33.0
HPP92_005977 Vanilla planifolia HOM05D061362 ORTHO05D010154 1.1e-09 68.9 108 36.1
Sopen07g015000 Solanum pennellii HOM05D000002 ORTHO05D000001 2.4e-09 67.8 50 58.0
SMO367G1035 Selaginella moellendorffii HOM05D008196 ORTHO05D010261 9.3e-09 65.9 83 38.6
Os08g0477800 Oryza sativa ssp. japonica HOM05D008012 ORTHO05D010154 3.5e-08 63.9 268 25.7
COL.COLO4_22690 Corchorus olitorius HOM05D008012 ORTHO05D010154 6.6e-07 59.7 66 48.5
Pp3c2_36970 Physcomitrium patens HOM05D008196 ORTHO05D010261 8.7e-07 59.3 125 28.8
Pp3c2_36980 Physcomitrium patens HOM05D008196 ORTHO05D010261 8.7e-07 59.3 125 28.8
AagrBONN_evm.TU.Sc2ySwM_344.3461 Anthoceros agrestis HOM05D008196 ORTHO05D010261 1.1e-06 58.9 148 25.7
arahy.Tifrunner.gnm1.ann1.XWH5X4 Arachis hypogaea HOM05D008012 ORTHO05D010154 4.3e-06 57.0 121 33.9
GSVIVG01033695001 Vitis vinifera HOM05D008196 ORTHO05D010261 5.6e-06 56.6 83 32.5
CSS0018510 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 9.6e-06 55.8 121 27.3


User provided reference genes

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