Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42589 Davidia involucrata HOM05D007802 ORTHO05D009879 3.6e-40 167.9 92 100.0
CSS0046125 Camellia sinensis var. sinensis HOM05D007802 ORTHO05D009879 8.8e-23 110.2 72 86.1
QL09p018673 Quercus lobata HOM05D007802 ORTHO05D009879 1.3e-21 106.3 93 64.5
TAR628G0546 Trochodendron aralioides HOM05D007802 ORTHO05D009879 1.7e-21 105.9 71 81.7
Haze_22490 Corylus avellana HOM05D007802 ORTHO05D009879 2.8e-21 105.1 94 67.0
Glyma.02G216200 Glycine max HOM05D007802 ORTHO05D009879 1.8e-20 102.4 84 66.7
Cfa013816 Carpinus fangiana HOM05D007802 ORTHO05D009879 7.0e-20 100.5 76 73.7
Atru.chr13.972 Acer truncatum HOM05D007802 ORTHO05D009879 1.6e-19 99.4 69 72.5
FvH4_5g34160 Fragaria vesca HOM05D007802 ORTHO05D009879 1.6e-19 99.4 69 75.4
Nn5g29812 Nelumbo nucifera HOM05D007802 ORTHO05D009879 1.3e-18 96.3 88 61.4
RcHm_v2.0_Chr7g0233751 Rosa chinensis HOM05D007802 ORTHO05D009879 1.7e-18 95.9 79 68.4
GSVIVG01009214001 Vitis vinifera HOM05D007802 ORTHO05D009879 1.7e-18 95.9 82 63.4
Lalb_Chr17g0344631 Lupinus albus HOM05D007802 ORTHO05D009879 3.8e-18 94.7 90 63.3
Prupe.1G536500 Prunus persica HOM05D007802 ORTHO05D009879 3.8e-18 94.7 84 66.7
Ciclev10002961m.g Citrus clementina HOM05D007802 ORTHO05D009879 5.0e-18 94.4 91 61.5
Ca_05474_v3 Cicer arietinum L. HOM05D007802 ORTHO05D009879 6.5e-18 94.0 88 62.5
FvH4_4g29130 Fragaria vesca HOM05D007802 ORTHO05D009879 6.5e-18 94.0 80 67.5
FAN12G4209 Fragaria x ananassa HOM05D007802 ORTHO05D009879 6.5e-18 94.0 80 67.5
Rhsim07G0213800 Rhododendron simsii HOM05D007802 ORTHO05D009879 1.5e-17 92.8 102 54.9
Manes.18G057100 Manihot esculenta HOM05D007802 ORTHO05D009879 1.9e-17 92.4 103 56.3
MD08G1204900 Malus domestica HOM05D007802 ORTHO05D009879 4.2e-17 91.3 69 71.0
Cpa.g.sc21.44 Carica papaya HOM05D007802 ORTHO05D009879 5.5e-17 90.9 82 61.0
CiPaw.08G057300 Carya illinoinensis HOM05D007802 ORTHO05D009879 5.5e-17 90.9 69 69.6
MD08G1204300 Malus domestica HOM05D007802 ORTHO05D009879 9.5e-17 90.1 70 67.1
Oeu040885.1 Olea europaea HOM05D007802 ORTHO05D009879 9.5e-17 90.1 90 61.1
Psat2g064360 Pisum sativum HOM05D007802 ORTHO05D009879 4.7e-16 87.8 84 61.9
MELO3C011071.2 Cucumis melo HOM05D007802 ORTHO05D009879 6.1e-16 87.4 70 67.1
arahy.Tifrunner.gnm1.ann1.6VNW8E Arachis hypogaea HOM05D007802 ORTHO05D009879 8.0e-16 87.0 95 55.8
Eucgr.F00437 Eucalyptus grandis HOM05D007802 ORTHO05D009879 2.3e-15 85.5 62 71.0
Phvul.008G183400 Phaseolus vulgaris HOM05D007802 ORTHO05D009879 4.0e-15 84.7 82 58.5
TPR.G38823 Trifolium pratense HOM05D007802 ORTHO05D009879 4.0e-15 84.7 91 56.0
CANSAT78G0113 Cannabis sativa HOM05D007802 ORTHO05D009879 6.8e-15 84.0 65 66.2
FAN08G3003 Fragaria x ananassa HOM05D007802 ORTHO05D009879 6.8e-15 84.0 98 53.1
FAN18G1081 Fragaria x ananassa HOM05D007802 ORTHO05D009879 6.8e-15 84.0 98 53.1
Medtr5g066760 Medicago truncatula HOM05D007802 ORTHO05D009879 6.8e-15 84.0 88 59.1
AUR62019113 Chenopodium quinoa HOM05D007802 ORTHO05D009879 1.2e-14 83.2 76 60.5
Cc10_g08360 Coffea canephora HOM05D007802 ORTHO05D009879 2.0e-14 82.4 93 50.5
ClCG08G011540 Citrullus lanatus HOM05D007802 ORTHO05D009879 2.6e-14 82.0 93 54.8
Sed0007651 Sechium edule HOM05D007802 ORTHO05D009879 2.6e-14 82.0 94 53.2
FAN07G2104 Fragaria x ananassa HOM05D007802 ORTHO05D009879 3.4e-14 81.6 71 63.4
Sabra02G0086800 Salix brachista HOM05D007802 ORTHO05D009879 3.4e-14 81.6 69 62.3
Nitab4.5_0001601g0070 Nicotiana tabacum HOM05D007802 ORTHO05D009879 4.4e-14 81.3 92 53.3
Gohir.D05G220800 Gossypium hirsutum HOM05D007802 ORTHO05D009879 5.7e-14 80.9 93 52.7
Gorai.009G227900 Gossypium raimondii HOM05D007802 ORTHO05D009879 5.7e-14 80.9 93 52.7
DCAR_019323 Daucus carota HOM05D007802 ORTHO05D009879 7.5e-14 80.5 91 53.8
C07p40270 Brassica napus HOM05D007802 ORTHO05D009879 1.7e-13 79.3 82 54.9
CARHR133150 Cardamine hirsuta HOM05D007802 ORTHO05D009879 1.7e-13 79.3 71 59.2
BolC7t44562H Brassica oleracea HOM05D007802 ORTHO05D009879 2.2e-13 79.0 82 54.9
BcaB02g09173 Brassica carinata HOM05D007802 ORTHO05D009879 2.8e-13 78.6 82 53.7
SalBow7G0598 Salvia bowleyana HOM05D007802 ORTHO05D009879 2.8e-13 78.6 66 60.6
AUR62014370 Chenopodium quinoa HOM05D007802 ORTHO05D009879 3.7e-13 78.2 92 54.3
THA.LOC104806901 Tarenaya hassleriana HOM05D007802 ORTHO05D009879 3.7e-13 78.2 64 65.6
AL4G35740 Arabidopsis lyrata HOM05D007802 ORTHO05D009879 4.9e-13 77.8 82 53.7
Gohir.A05G216600 Gossypium hirsutum HOM05D007802 ORTHO05D009879 4.9e-13 77.8 92 51.1
PGR042G2061 Punica granatum HOM05D007802 ORTHO05D009879 6.3e-13 77.4 74 58.1
Thecc.08G074100 Theobroma cacao HOM05D007802 ORTHO05D009879 6.3e-13 77.4 69 62.3
Thhalv10017501m.g Eutrema salsugineum HOM05D007802 ORTHO05D009879 8.3e-13 77.0 71 54.9
AT2G38465 Arabidopsis thaliana HOM05D007802 ORTHO05D009879 1.1e-12 76.6 82 52.4
Nitab4.5_0003852g0060 Nicotiana tabacum HOM05D007802 ORTHO05D009879 1.1e-12 76.6 92 51.1
BcaC02g11998 Brassica carinata HOM05D007802 ORTHO05D009879 1.4e-12 76.3 92 50.0
BcaNung02098 Brassica carinata HOM05D007802 ORTHO05D009879 1.4e-12 76.3 82 53.7
BolC4t22496H Brassica oleracea HOM05D007802 ORTHO05D009879 1.4e-12 76.3 92 50.0
BraA05t19725Z Brassica rapa HOM05D007802 ORTHO05D009879 1.4e-12 76.3 92 50.0
Carub.0004s2044 Capsella rubella HOM05D007802 ORTHO05D009879 1.4e-12 76.3 92 51.1
MBI16_g07278_MAGBIO Magnolia biondii HOM05D007802 ORTHO05D009879 1.8e-12 75.9 81 54.3
C04p09060 Brassica napus HOM05D007802 ORTHO05D009879 3.1e-12 75.1 92 48.9
A05p07580 Brassica napus HOM05D007802 ORTHO05D009879 4.1e-12 74.7 92 50.0
A04p29410 Brassica napus HOM05D007802 ORTHO05D009879 9.2e-12 73.6 71 54.9
Sopen08g006790 Solanum pennellii HOM05D007802 ORTHO05D009879 1.6e-11 72.8 71 54.9
arahy.Tifrunner.gnm1.ann1.J1FBU0 Arachis hypogaea HOM05D007802 ORTHO05D009879 2.7e-11 72.0 84 47.6
BcaB06g29053 Brassica carinata HOM05D007802 ORTHO05D009879 2.7e-11 72.0 71 52.1
Solyc08g016415.1 Solanum lycopersicum HOM05D007802 ORTHO05D009879 2.7e-11 72.0 71 54.9
TWI56G1155 Tripterygium wilfordii HOM05D007802 ORTHO05D009879 4.5e-11 71.2 68 58.8
HPP92_025782 Vanilla planifolia HOM05D007802 ORTHO05D009879 4.5e-11 71.2 68 61.8
Aa31LG1G14150 Aethionema arabicum HOM05D007802 ORTHO05D009879 2.9e-10 68.6 90 48.9
ATR0767G120 Amborella trichopoda HOM05D007802 ORTHO05D009879 2.9e-10 68.6 65 56.9
Sp4g20790 Schrenkiella parvula HOM05D007802 ORTHO05D009879 8.6e-10 67.0 82 50.0
Glyma.14G183300 Glycine max HOM05D007802 ORTHO05D009879 1.2e-08 63.2 44 72.7
Aqoxy6G00664 Aquilegia oxysepala HOM05D007802 ORTHO05D009879 2.1e-08 62.4 103 40.8
SEGI_04889 Sequoiadendron giganteum HOM05D007802 ORTHO05D009879 2.1e-08 62.4 66 48.5
COL.COLO4_35287 Corchorus olitorius HOM05D007802 ORTHO05D009879 2.8e-08 62.0 99 41.4
SEGI_40405 Sequoiadendron giganteum HOM05D007802 ORTHO05D009879 3.6e-08 61.6 74 45.9
FAN17G1901 Fragaria x ananassa HOM05D003602 ORTHO05D020334 3.4e-06 55.1 39 71.8


User provided reference genes

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