Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42524 Davidia involucrata HOM05D006002 ORTHO05D007651 5.3e-184 647.5 319 100.0
Hma1.2p1_0193F.1_g084460 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 3.4e-122 442.2 342 65.5
Actinidia37107 Actinidia chinensis HOM05D006002 ORTHO05D007651 9.9e-122 440.7 368 63.3
Hma1.2p1_0193F.1_g084470 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 1.3e-121 440.3 335 66.3
Rhsim04G0006400 Rhododendron simsii HOM05D006002 ORTHO05D007651 4.6e-119 431.8 370 63.2
vmacro09790 Vaccinium macrocarpon HOM05D006002 ORTHO05D007651 8.7e-118 427.6 366 62.8
CSS0008604 Camellia sinensis var. sinensis HOM05D006002 ORTHO05D007651 1.6e-116 423.3 375 62.7
TAR627G1081 Trochodendron aralioides HOM05D006002 ORTHO05D007651 3.3e-109 399.1 374 59.4
MD10G1197800 Malus domestica HOM05D006002 ORTHO05D007651 1.5e-106 390.2 367 56.7
Cc05_g15870 Coffea canephora HOM05D006002 ORTHO05D007651 1.7e-105 386.7 367 57.2
Sopen07g034460 Solanum pennellii HOM05D006002 ORTHO05D007651 1.7e-105 386.7 345 57.7
QL04p088541 Quercus lobata HOM05D006002 ORTHO05D007651 2.9e-105 386.0 369 56.1
Migut.M01570 Erythranthe guttata HOM05D006002 ORTHO05D007651 4.9e-105 385.2 367 57.5
Solyc07g066280.3 Solanum lycopersicum HOM05D006002 ORTHO05D007651 5.4e-104 381.7 345 56.5
Lsat_1_v5_gn_7_116060 Lactuca sativa HOM05D006002 ORTHO05D007651 2.1e-103 379.8 363 57.0
CAN.G943.23 Capsicum annuum HOM05D006002 ORTHO05D007651 6.0e-103 378.3 343 57.4
PGSC0003DMG400022243 Solanum tuberosum HOM05D006002 ORTHO05D007651 7.9e-103 377.9 345 56.5
Manes.03G102600 Manihot esculenta HOM05D006002 ORTHO05D007651 3.0e-102 375.9 365 55.9
Nn3g20175 Nelumbo nucifera HOM05D006002 ORTHO05D007651 6.7e-102 374.8 370 56.5
MSTRG.16122 Avicennia marina HOM05D006002 ORTHO05D007651 2.5e-101 372.9 364 55.5
Nitab4.5_0000294g0110 Nicotiana tabacum HOM05D006002 ORTHO05D007651 2.5e-101 372.9 344 56.4
Nitab4.5_0001235g0050 Nicotiana tabacum HOM05D006002 ORTHO05D007651 3.3e-101 372.5 344 56.4
HanXRQChr11g0335201 Helianthus annuus HOM05D006002 ORTHO05D007651 4.3e-101 372.1 364 54.7
Prupe.4G144100 Prunus persica HOM05D006002 ORTHO05D007651 5.6e-101 371.7 366 55.7
RcHm_v2.0_Chr5g0027061 Rosa chinensis HOM05D006002 ORTHO05D007651 1.3e-100 370.5 369 54.7
Potri.003G221400 Populus trichocarpa HOM05D006002 ORTHO05D007651 8.1e-100 367.9 371 56.1
Eucgr.F01438 Eucalyptus grandis HOM05D006002 ORTHO05D007651 2.0e-98 363.2 347 55.9
Ciclev10020646m.g Citrus clementina HOM05D006002 ORTHO05D007651 3.8e-97 359.0 328 56.7
Lj3g0018048 Lotus japonicus HOM05D006002 ORTHO05D007651 4.9e-97 358.6 344 55.2
Psat3g026200 Pisum sativum HOM05D006002 ORTHO05D007651 4.9e-97 358.6 367 52.0
Glyma.15G260100 Glycine max HOM05D006002 ORTHO05D007651 6.5e-97 358.2 341 54.5
Ca_09098_v3 Cicer arietinum L. HOM05D006002 ORTHO05D007651 8.4e-97 357.8 368 52.2
PGR083G2675 Punica granatum HOM05D006002 ORTHO05D007651 1.9e-96 356.7 370 53.5
Peaxi162Scf00232g00102 Petunia axillaris HOM05D006002 ORTHO05D007651 2.5e-96 356.3 343 54.2
Lj8A185G55 Lonicera japonica HOM05D006002 ORTHO05D007651 4.2e-96 355.5 327 58.4
unitig_748.g7639 Utricularia gibba HOM05D006002 ORTHO05D007651 1.2e-95 354.0 364 51.6
TWI53G1943 Tripterygium wilfordii HOM05D006002 ORTHO05D007651 2.1e-95 353.2 349 54.4
FvH4_3g16091 Fragaria vesca HOM05D006002 ORTHO05D007651 2.7e-95 352.8 325 56.0
FAN11G0453 Fragaria x ananassa HOM05D006002 ORTHO05D007651 6.0e-95 351.7 325 56.0
FAN16G0275 Fragaria x ananassa HOM05D006002 ORTHO05D007651 1.3e-94 350.5 375 52.0
Glyma.08G167200 Glycine max HOM05D006002 ORTHO05D007651 1.8e-94 350.1 342 52.9
Medtr7g107330 Medicago truncatula HOM05D006002 ORTHO05D007651 2.3e-94 349.7 366 50.5
CANSAT56G1259 Cannabis sativa HOM05D006002 ORTHO05D007651 3.9e-94 349.0 369 53.4
arahy.Tifrunner.gnm1.ann1.0RH0I3 Arachis hypogaea HOM05D006002 ORTHO05D007651 8.7e-94 347.8 343 54.2
Gorai.009G080200 Gossypium raimondii HOM05D006002 ORTHO05D007651 1.5e-93 347.1 353 52.1
arahy.Tifrunner.gnm1.ann1.HWL53Q Arachis hypogaea HOM05D006002 ORTHO05D007651 3.3e-93 345.9 343 53.6
Sabra03G0164800 Salix brachista HOM05D006002 ORTHO05D007651 4.3e-93 345.5 336 56.0
Duzib168G0541 Durio zibethinus HOM05D006002 ORTHO05D007651 9.6e-93 344.4 352 52.3
SGA_v2.0_scaffold7G03564 Striga asiatica HOM05D006002 ORTHO05D007651 1.6e-92 343.6 360 53.1
ClCG11G016270 Citrullus lanatus HOM05D006002 ORTHO05D007651 3.7e-92 342.4 332 53.9
FAN25G3512 Fragaria x ananassa HOM05D006002 ORTHO05D007651 3.7e-92 342.4 372 51.1
COL.COLO4_25103 Corchorus olitorius HOM05D006002 ORTHO05D007651 8.2e-92 341.3 351 53.6
Gohir.A05G076100 Gossypium hirsutum HOM05D006002 ORTHO05D007651 4.1e-91 339.0 353 51.3
Phvul.005G050900 Phaseolus vulgaris HOM05D006002 ORTHO05D007651 1.2e-90 337.4 342 52.6
Thecc.03G324000 Theobroma cacao HOM05D006002 ORTHO05D007651 1.5e-90 337.0 350 51.4
CsaV3_2G022200 Cucumis sativus L. HOM05D006002 ORTHO05D007651 5.8e-90 335.1 368 51.4
Ah.04g163380 Amaranthus hybridus HOM05D006002 ORTHO05D007651 7.6e-90 334.7 344 53.5
PSO675G3741 Papaver somniferum HOM05D006002 ORTHO05D007651 7.6e-90 334.7 341 52.2
ECA236G2913 Erigeron canadensis HOM05D006002 ORTHO05D007651 1.7e-89 333.6 370 50.8
PSO541G1619 Papaver somniferum HOM05D006002 ORTHO05D007651 2.9e-89 332.8 341 52.8
MBI02_g43301_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 3.8e-89 332.4 354 50.0
Hund02296 Selenicereus undatus HOM05D006002 ORTHO05D007651 3.8e-89 332.4 328 54.9
THA.LOC104819332 Tarenaya hassleriana HOM05D006002 ORTHO05D007651 5.0e-89 332.0 359 50.7
Sc03g0007860 Simmondsia chinensis HOM05D006002 ORTHO05D007651 6.5e-89 331.6 376 50.5
VMungo1080G0998 Vigna mungo HOM05D001395 ORTHO05D002039 1.1e-88 330.9 336 53.0
Eucgr.F01442 Eucalyptus grandis HOM05D006002 ORTHO05D007651 1.9e-88 330.1 315 55.6
SalBow8G1862 Salvia bowleyana HOM05D006002 ORTHO05D007651 4.2e-88 328.9 362 52.5
Sed0002243 Sechium edule HOM05D006002 ORTHO05D007651 9.3e-88 327.8 344 52.3
Haze_07820 Corylus avellana HOM05D006002 ORTHO05D007651 9.7e-85 317.8 308 54.9
Aqoxy1G01586 Aquilegia oxysepala HOM05D006002 ORTHO05D007651 1.6e-84 317.0 359 47.4
Gohir.1Z049302 Gossypium hirsutum HOM05D006002 ORTHO05D007651 1.6e-84 317.0 323 53.9
Aa31LG1G17780 Aethionema arabicum HOM05D006002 ORTHO05D007651 1.8e-83 313.5 337 49.3
QL04p088993 Quercus lobata HOM05D006002 ORTHO05D007651 2.4e-83 313.2 293 56.3
Thhalv10004403m.g Eutrema salsugineum HOM05D006002 ORTHO05D007651 6.9e-83 311.6 329 51.4
Sp2g27210 Schrenkiella parvula HOM05D006002 ORTHO05D007651 1.0e-81 307.8 337 49.6
A06p30870 Brassica napus HOM05D006002 ORTHO05D007651 1.3e-81 307.4 376 48.1
Gohir.D05G078800 Gossypium hirsutum HOM05D006002 ORTHO05D007651 1.3e-81 307.4 326 50.3
BolC3t18471H Brassica oleracea HOM05D006002 ORTHO05D007651 6.5e-81 305.1 376 47.3
AT5G64150 Arabidopsis thaliana HOM05D006002 ORTHO05D007651 8.5e-81 304.7 331 49.5
CARHR278060 Cardamine hirsuta HOM05D006002 ORTHO05D007651 1.1e-80 304.3 373 47.5
MBI02_g20986_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 1.1e-80 304.3 386 46.6
BcaC01g02672 Brassica carinata HOM05D006002 ORTHO05D007651 2.5e-80 303.1 375 47.2
BcaB02g09782 Brassica carinata HOM05D006002 ORTHO05D007651 3.2e-80 302.8 327 50.2
Carub.0008s2494 Capsella rubella HOM05D006002 ORTHO05D007651 4.2e-80 302.4 349 48.1
AL8G41420 Arabidopsis lyrata HOM05D006002 ORTHO05D007651 7.2e-80 301.6 339 49.3
CDE02G2905 Ceratophyllum demersum HOM05D006002 ORTHO05D007651 1.2e-79 300.8 352 47.4
CiPaw.11G062100 Carya illinoinensis HOM05D006002 ORTHO05D007651 2.3e-78 296.6 293 53.2
EL10Ac4g08518 Beta vulgaris HOM05D006002 ORTHO05D007651 1.5e-77 293.9 372 46.2
BraA06t26026Z Brassica rapa HOM05D006002 ORTHO05D007651 2.0e-77 293.5 370 47.6
C03p62100 Brassica napus HOM05D006002 ORTHO05D007651 7.4e-77 291.6 370 46.8
Lalb_Chr25g0284701 Lupinus albus HOM05D006002 ORTHO05D007651 1.1e-75 287.7 285 53.0
MELO3C010553.2 Cucumis melo HOM05D006002 ORTHO05D007651 5.0e-73 278.9 327 50.2
TPR.G32276 Trifolium pratense HOM05D006002 ORTHO05D007651 1.4e-72 277.3 316 47.5
HPP92_001894 Vanilla planifolia HOM05D006002 ORTHO05D004222 1.5e-69 267.3 333 47.1
GSVIVG01020461001 Vitis vinifera HOM05D006002 ORTHO05D007651 4.4e-69 265.8 243 57.6
AUR62041934 Chenopodium quinoa HOM05D006002 ORTHO05D007651 3.8e-65 252.7 265 55.8
AUR62035491 Chenopodium quinoa HOM05D006002 ORTHO05D007651 2.5e-64 250.0 265 55.5
ATR0165G036 Amborella trichopoda HOM05D006002 ORTHO05D007651 9.7e-61 238.0 257 49.8
MD05G1214000 Malus domestica HOM05D006002 ORTHO05D007651 9.7e-61 238.0 225 56.0
QL03p043202 Quercus lobata HOM05D006002 ORTHO05D007651 1.7e-60 237.3 286 47.9
SEGI_37419 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 3.7e-60 236.1 291 44.0
Os12g0612500 Oryza sativa ssp. japonica HOM05D006002 ORTHO05D007651 4.5e-58 229.2 323 41.8
Cpa.g.sc42.82 Carica papaya HOM05D006002 ORTHO05D007651 5.4e-51 205.7 124 75.8
Potri.018G000850 Populus trichocarpa HOM05D006002 ORTHO05D007651 7.0e-51 205.3 332 40.7
Actinidia35439 Actinidia chinensis HOM05D006002 ORTHO05D007651 7.2e-48 195.3 151 65.6
SMO145G0236 Selaginella moellendorffii HOM05D006002 ORTHO05D007651 7.2e-48 195.3 330 36.7
Atru.chr2.1886 Acer truncatum HOM05D006002 ORTHO05D007651 1.6e-47 194.1 264 43.9
AagrBONN_evm.TU.Sc2ySwM_344.4971 Anthoceros agrestis HOM05D006002 ORTHO05D007651 3.0e-46 189.9 327 37.6
Oeu052016.1 Olea europaea HOM05D006002 ORTHO05D007651 8.8e-46 188.3 242 45.9
Mapoly0051s0043 Marchantia polymorpha HOM05D006002 ORTHO05D007651 2.0e-45 187.2 443 30.7
Pp3c1_22930 Physcomitrium patens HOM05D006002 ORTHO05D007651 1.4e-43 181.0 471 29.9
Cfa022974 Carpinus fangiana HOM05D006002 ORTHO05D007651 2.3e-41 173.7 252 45.6
Zm00001eb031660 Zea mays HOM05D006002 ORTHO05D007651 2.1e-39 167.2 125 59.2
SEGI_15629 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 2.2e-36 157.1 128 57.8
Cpa.g.sc42.79 Carica papaya HOM05D006002 ORTHO05D007651 2.7e-34 150.2 292 39.7
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 2.3e-33 147.1 215 39.5
COL.COLO4_30126 Corchorus olitorius HOM05D006002 ORTHO05D007651 5.8e-29 132.5 85 71.8
QL04p089617 Quercus lobata HOM05D002182 ORTHO05D004671 6.6e-25 119.0 138 49.3
QL04p088694 Quercus lobata HOM05D006002 ORTHO05D007651 7.3e-24 115.5 151 47.0
MCO01G477 Micromonas commoda HOM05D006002 ORTHO05D007651 1.1e-22 111.7 169 37.9
TPR.G18376 Trifolium pratense HOM05D006002 ORTHO05D007651 7.5e-21 105.5 157 40.8
QL04p089868 Quercus lobata HOM05D006002 ORTHO05D007651 1.7e-20 104.4 71 70.4
Cre07.g337516 Chlamydomonas reinhardtii HOM05D006002 ORTHO05D007651 2.2e-20 104.0 151 39.7
QL03p043192 Quercus lobata HOM05D006002 ORTHO05D007651 3.7e-20 103.2 63 76.2
Potri.001G003632 Populus trichocarpa HOM05D006002 ORTHO05D007651 1.3e-17 94.7 150 41.3
PRCOL_00003514 Prasinoderma coloniale HOM05D006002 ORTHO05D007651 4.0e-14 83.2 223 31.4
CAN.G548.23 Capsicum annuum HOM05D006002 ORTHO05D007651 6.6e-09 65.9 128 36.7
PSO675G4619 Papaver somniferum HOM05D000047 ORTHO05D000044 7.3e-08 62.4 106 35.8
QL04p062372 Quercus lobata HOM05D006002 ORTHO05D007651 1.2e-07 61.6 118 38.1


User provided reference genes

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