Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42517 Davidia involucrata HOM05D004893 ORTHO05D006320 3.9e-268 927.5 462 100.0
Hma1.2p1_0321F.1_g124570 Hydrangea macrophylla HOM05D004893 ORTHO05D006320 8.5e-207 723.8 461 76.6
CSS0008978 Camellia sinensis var. sinensis HOM05D004893 ORTHO05D006320 2.3e-204 715.7 461 76.8
CSS0040034 Camellia sinensis var. sinensis HOM05D004893 ORTHO05D006320 2.3e-204 715.7 461 76.8
vmacro21776 Vaccinium macrocarpon HOM05D004893 ORTHO05D006320 2.8e-202 708.8 461 75.5
Actinidia07346 Actinidia chinensis HOM05D004893 ORTHO05D006320 3.1e-201 705.3 461 77.0
TAR627G1078 Trochodendron aralioides HOM05D004893 ORTHO05D006320 2.0e-192 676.0 460 73.5
Potri.006G166500 Populus trichocarpa HOM05D004893 ORTHO05D006320 3.5e-192 675.2 461 71.6
GSVIVG01030738001 Vitis vinifera HOM05D004893 ORTHO05D006320 1.3e-191 673.3 461 72.2
ECA240G4652 Erigeron canadensis HOM05D004893 ORTHO05D006320 5.5e-190 667.9 461 70.3
Potri.018G091100 Populus trichocarpa HOM05D004893 ORTHO05D006320 4.7e-189 664.8 461 70.3
Manes.06G023100 Manihot esculenta HOM05D004893 ORTHO05D006320 1.4e-188 663.3 460 70.2
Sabra06G0128100 Salix brachista HOM05D004893 ORTHO05D006320 5.2e-188 661.4 461 69.6
Thecc.09G175700 Theobroma cacao HOM05D004893 ORTHO05D006320 5.2e-188 661.4 460 69.8
Ciclev10007405m.g Citrus clementina HOM05D004893 ORTHO05D006320 1.1e-187 660.2 460 70.0
DCAR_013745 Daucus carota HOM05D004893 ORTHO05D006320 2.6e-187 659.1 461 69.8
Rhsim13G0225800 Rhododendron simsii HOM05D004893 ORTHO05D006320 2.8e-186 655.6 498 66.9
Duzib150G0781 Durio zibethinus HOM05D004893 ORTHO05D006320 3.7e-186 655.2 460 69.3
HanXRQChr09g0273501 Helianthus annuus HOM05D004893 ORTHO05D006320 8.2e-186 654.1 460 68.3
CiPaw.08G035400 Carya illinoinensis HOM05D004893 ORTHO05D006320 7.0e-185 651.0 461 69.4
Gohir.D05G004900 Gossypium hirsutum HOM05D004893 ORTHO05D006320 3.5e-184 648.7 460 68.9
Gorai.009G004800 Gossypium raimondii HOM05D004893 ORTHO05D006320 4.5e-184 648.3 460 68.7
Atru.chr7.881 Acer truncatum HOM05D004893 ORTHO05D006320 3.8e-183 645.2 460 68.7
Gohir.A05G004264 Gossypium hirsutum HOM05D004893 ORTHO05D006320 5.0e-183 644.8 460 68.5
Peaxi162Scf00452g00844 Petunia axillaris HOM05D004893 ORTHO05D006320 8.5e-183 644.0 459 69.9
Cfa013310 Carpinus fangiana HOM05D004893 ORTHO05D006320 1.1e-182 643.7 461 69.2
Cfa010313 Carpinus fangiana HOM05D004893 ORTHO05D006320 1.9e-182 642.9 461 68.8
Lsat_1_v5_gn_7_72221 Lactuca sativa HOM05D004893 ORTHO05D006320 3.6e-181 638.6 462 68.8
Eucgr.C02353 Eucalyptus grandis HOM05D004893 ORTHO05D006320 1.0e-180 637.1 461 67.0
Lj8C187G7 Lonicera japonica HOM05D004893 ORTHO05D006320 1.8e-180 636.3 468 70.1
Sed0012855 Sechium edule HOM05D004893 ORTHO05D006320 1.8e-180 636.3 461 67.0
SalBow8G3700 Salvia bowleyana HOM05D004893 ORTHO05D006320 3.0e-180 635.6 461 68.8
QL02p098221 Quercus lobata HOM05D004893 ORTHO05D006320 4.0e-180 635.2 461 67.7
Migut.M01562 Erythranthe guttata HOM05D004893 ORTHO05D006320 6.8e-180 634.4 461 67.9
Sc12g0007760 Simmondsia chinensis HOM05D004893 ORTHO05D006320 8.8e-180 634.0 461 67.7
MSTRG.16114 Avicennia marina HOM05D004893 ORTHO05D006320 2.0e-179 632.9 461 68.3
Sed0012025 Sechium edule HOM05D004893 ORTHO05D006320 3.4e-179 632.1 461 66.6
Atru.chr13.1778 Acer truncatum HOM05D004893 ORTHO05D006320 7.5e-179 630.9 460 67.8
Nn7g38118 Nelumbo nucifera HOM05D004893 ORTHO05D006320 3.7e-178 628.6 461 67.7
ClCG06G013450 Citrullus lanatus HOM05D004893 ORTHO05D006320 8.3e-178 627.5 464 66.8
PGR044G2140 Punica granatum HOM05D004893 ORTHO05D006320 4.1e-177 625.2 461 67.7
Ah.09g231700 Amaranthus hybridus HOM05D004893 ORTHO05D006320 9.1e-177 624.0 460 66.5
Nitab4.5_0008437g0020 Nicotiana tabacum HOM05D004893 ORTHO05D006320 1.7e-175 619.8 472 67.4
CANSAT11G1129 Cannabis sativa HOM05D004893 ORTHO05D006320 5.0e-175 618.2 462 64.9
CsaV3_1G031710 Cucumis sativus L. HOM05D004893 ORTHO05D006320 8.5e-175 617.5 463 65.0
Cc05_g16000 Coffea canephora HOM05D004893 ORTHO05D006320 5.5e-174 614.8 459 66.9
Solyc07g066410.4 Solanum lycopersicum HOM05D004893 ORTHO05D006320 2.1e-173 612.8 459 67.1
TWI34G0813 Tripterygium wilfordii HOM05D004893 ORTHO05D006320 2.1e-173 612.8 460 65.7
MD13G1251600 Malus domestica HOM05D004893 ORTHO05D006320 3.6e-173 612.1 465 66.0
EL10Ac6g14738 Beta vulgaris HOM05D004893 ORTHO05D006320 4.0e-172 608.6 460 65.2
Prupe.1G084200 Prunus persica HOM05D004893 ORTHO05D006320 2.0e-171 606.3 464 67.2
THA.LOC104803489 Tarenaya hassleriana HOM05D004893 ORTHO05D006320 5.7e-171 604.7 463 64.6
Sopen07g034580 Solanum pennellii HOM05D004893 ORTHO05D006320 1.7e-170 603.2 459 66.4
RcHm_v2.0_Chr4g0401591 Rosa chinensis HOM05D004893 ORTHO05D006320 6.3e-170 601.3 461 66.4
FAN22G1078 Fragaria x ananassa HOM05D004893 ORTHO05D006320 4.5e-168 595.1 461 65.5
FvH4_4g07920 Fragaria vesca HOM05D004893 ORTHO05D006320 7.7e-168 594.3 461 66.4
FAN12G2097 Fragaria x ananassa HOM05D004893 ORTHO05D006320 7.7e-168 594.3 461 66.2
SGA_v2.0_scaffold186G40224 Striga asiatica HOM05D004893 ORTHO05D006320 1.7e-167 593.2 519 59.3
AT2G18900 Arabidopsis thaliana HOM05D004893 ORTHO05D006320 5.0e-167 591.7 464 64.0
AL3G53020 Arabidopsis lyrata HOM05D004893 ORTHO05D006320 1.9e-166 589.7 464 63.1
Aqoxy3G03036 Aquilegia oxysepala HOM05D004893 ORTHO05D006320 3.3e-166 589.0 464 63.8
MELO3C017452.2 Cucumis melo HOM05D004893 ORTHO05D006320 3.3e-166 589.0 463 63.5
Nitab4.5_0001749g0080 Nicotiana tabacum HOM05D004893 ORTHO05D006320 4.3e-166 588.6 473 65.3
FAN07G0898 Fragaria x ananassa HOM05D004893 ORTHO05D006320 2.1e-165 586.3 463 64.8
Thhalv10022562m.g Eutrema salsugineum HOM05D004893 ORTHO05D006320 2.8e-165 585.9 463 63.1
Sp3g32370 Schrenkiella parvula HOM05D004893 ORTHO05D006320 5.2e-164 581.6 463 62.9
Haze_03433 Corylus avellana HOM05D004893 ORTHO05D006320 2.6e-163 579.3 467 63.4
Carub.0003s3314 Capsella rubella HOM05D004893 ORTHO05D006320 4.4e-163 578.6 465 61.9
C07p03690 Brassica napus HOM05D004893 ORTHO05D006320 3.7e-162 575.5 464 62.9
BolC7t40765H Brassica oleracea HOM05D004893 ORTHO05D006320 3.7e-162 575.5 464 62.9
BcaC06g36488 Brassica carinata HOM05D004893 ORTHO05D006320 1.8e-161 573.2 464 62.7
CARHR109460 Cardamine hirsuta HOM05D004893 ORTHO05D006320 4.6e-160 568.5 465 61.1
A07p01760 Brassica napus HOM05D004893 ORTHO05D006320 2.3e-159 566.2 465 62.2
COL.COLO4_37741 Corchorus olitorius HOM05D004893 ORTHO05D006320 3.9e-159 565.5 461 63.8
Lj4g0004814 Lotus japonicus HOM05D004893 ORTHO05D006320 5.0e-159 565.1 460 60.2
BraA07t27976Z Brassica rapa HOM05D004893 ORTHO05D006320 1.5e-158 563.5 473 61.3
Lalb_Chr07g0180551 Lupinus albus HOM05D004893 ORTHO05D006320 2.3e-156 556.2 462 59.1
PSO063G4841 Papaver somniferum HOM05D004893 ORTHO05D006320 2.3e-156 556.2 460 62.8
FAN17G0276 Fragaria x ananassa HOM05D004893 ORTHO05D006320 6.8e-156 554.7 524 57.3
CDE08G1653 Ceratophyllum demersum HOM05D004893 ORTHO05D006320 4.4e-155 552.0 461 59.4
arahy.Tifrunner.gnm1.ann1.B5GTII Arachis hypogaea HOM05D004893 ORTHO05D006320 1.7e-154 550.1 461 60.1
PSO782G3725 Papaver somniferum HOM05D004893 ORTHO05D006320 2.2e-154 549.7 460 62.4
Aa31LG8G15990 Aethionema arabicum HOM05D004893 ORTHO05D006320 8.3e-154 547.7 468 58.8
VMungo1215G1808 Vigna mungo HOM05D004893 ORTHO05D006320 1.3e-151 540.4 462 58.2
HPP92_012201 Vanilla planifolia HOM05D004893 ORTHO05D006320 1.9e-150 536.6 462 57.6
TPR.G5437 Trifolium pratense HOM05D004893 ORTHO05D006320 1.6e-149 533.5 462 57.8
Ca_21236_v3 Cicer arietinum L. HOM05D004893 ORTHO05D006320 2.8e-149 532.7 462 57.8
Psat4g012800 Pisum sativum HOM05D004893 ORTHO05D006320 2.0e-147 526.6 460 56.1
arahy.Tifrunner.gnm1.ann1.48BVGN Arachis hypogaea HOM05D004893 ORTHO05D006320 4.9e-146 521.9 464 57.3
ATR1098G135 Amborella trichopoda HOM05D004893 ORTHO05D006320 7.1e-145 518.1 464 57.8
Medtr4g127820 Medicago truncatula HOM05D004893 ORTHO05D006320 2.1e-144 516.5 460 56.7
Phvul.003G144100 Phaseolus vulgaris HOM05D004893 ORTHO05D006320 6.0e-144 515.0 462 56.3
Glyma.13G097400 Glycine max HOM05D004893 ORTHO05D006320 2.3e-143 513.1 463 56.8
Glyma.17G062200 Glycine max HOM05D004893 ORTHO05D006320 6.6e-143 511.5 463 56.6
AUR62042215 Chenopodium quinoa HOM05D004893 ORTHO05D006320 4.7e-141 505.4 460 56.7
Hund06466 Selenicereus undatus HOM05D004893 ORTHO05D006320 9.2e-137 491.1 461 56.4
BcaB03g16682 Brassica carinata HOM05D004893 ORTHO05D006320 1.7e-135 486.9 463 55.7
Zm00001eb031520 Zea mays HOM05D004893 ORTHO05D006320 5.8e-131 471.9 464 51.1
AUR62033061 Chenopodium quinoa HOM05D004893 ORTHO05D006320 1.9e-129 466.8 460 52.8
Os12g0609800 Oryza sativa ssp. japonica HOM05D004893 ORTHO05D006320 5.1e-127 458.8 464 50.0
Cpa.g.sc523.1 Carica papaya HOM05D004893 ORTHO05D006320 2.1e-125 453.4 350 63.1
MD16G1255900 Malus domestica HOM05D004893 ORTHO05D006320 2.1e-117 426.8 445 52.4
unitig_748.g7834 Utricularia gibba HOM05D004893 ORTHO05D006320 2.5e-110 403.3 459 48.4
AL7G19230 Arabidopsis lyrata HOM05D004893 ORTHO05D006320 3.8e-106 389.4 468 46.6
AT3G26480 Arabidopsis thaliana HOM05D004893 ORTHO05D006320 8.4e-106 388.3 469 46.7
Thhalv10024453m.g Eutrema salsugineum HOM05D004893 ORTHO05D006320 3.9e-103 379.4 499 44.5
SEGI_38878 Sequoiadendron giganteum HOM05D004893 ORTHO05D006320 3.3e-102 376.3 464 45.0
C01p06460 Brassica napus HOM05D004893 ORTHO05D006320 1.1e-97 361.3 468 44.9
BolC1t00640H Brassica oleracea HOM05D004893 ORTHO05D006320 5.5e-89 332.4 469 42.9
AagrBONN_evm.TU.Sc2ySwM_228.3065 Anthoceros agrestis HOM05D004893 ORTHO05D006320 7.9e-88 328.6 476 39.5
Mapoly0156s0021 Marchantia polymorpha HOM05D004893 ORTHO05D006320 6.9e-84 315.5 478 37.4
BcaC09g52044 Brassica carinata HOM05D004893 ORTHO05D006320 3.4e-83 313.2 467 42.0
CARHR240500 Cardamine hirsuta HOM05D004893 ORTHO05D006320 3.4e-83 313.2 415 43.6
Pp3c7_4120 Physcomitrium patens HOM05D004893 ORTHO05D006320 3.2e-81 306.6 480 38.3
Oeu016137.1 Olea europaea HOM05D004893 ORTHO05D001543 1.6e-75 287.7 259 59.8
BcaB07g31639 Brassica carinata HOM05D004893 ORTHO05D006320 1.6e-72 277.7 463 38.4
Carub.0007s0802 Capsella rubella HOM05D004893 ORTHO05D006320 2.0e-70 270.8 315 46.3
SMO356G0292 Selaginella moellendorffii HOM05D004893 ORTHO05D006320 2.2e-69 267.3 466 34.5
RcHm_v2.0_Chr4g0401681 Rosa chinensis HOM05D004893 ORTHO05D006320 1.2e-64 251.5 156 75.6
MBI02_g33733_MAGBIO Magnolia biondii HOM05D004893 ORTHO05D006320 2.9e-45 187.2 177 55.9
MBI02_g12652_MAGBIO Magnolia biondii HOM05D004893 ORTHO05D006320 1.7e-42 177.9 113 73.5
CBR_g49376 Chara braunii HOM05D004893 ORTHO05D006320 4.9e-37 159.8 380 30.3
Cre04.g215350 Chlamydomonas reinhardtii HOM05D004893 ORTHO05D006320 6.4e-37 159.5 442 29.4
SHI02896 Sapria himalayana HOM05D004893 ORTHO05D006320 2.4e-36 157.5 104 71.2
MCO01G002 Micromonas commoda HOM05D004893 ORTHO05D006320 9.2e-36 155.6 473 28.5
PRCOL_00005731 Prasinoderma coloniale HOM05D004893 ORTHO05D006320 8.9e-23 112.5 448 24.1
Glyma.11G074200 Glycine max HOM05D004893 ORTHO05D006320 3.8e-21 107.1 97 54.6
BolC9t54333H Brassica oleracea HOM05D004893 ORTHO05D006320 1.0e-18 99.0 63 76.2
Cfa026329 Carpinus fangiana HOM05D004893 ORTHO05D006320 1.6e-11 75.1 94 39.4
BcaC04g22880 Brassica carinata HOM05D004893 ORTHO05D006320 3.0e-10 70.9 111 44.1
Actinidia31528 Actinidia chinensis HOM05D004893 ORTHO05D006320 1.6e-08 65.1 36 83.3
arahy.Tifrunner.gnm1.ann1.BHNU0I Arachis hypogaea HOM05D004893 ORTHO05D006320 1.4e-07 62.0 39 76.9
arahy.Tifrunner.gnm1.ann1.09RZEI Arachis hypogaea HOM05D004893 ORTHO05D006320 1.8e-07 61.6 39 76.9


User provided reference genes

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