Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42430 Davidia involucrata HOM05D005276 ORTHO05D006813 3.7e-202 708.0 357 100.0
Dinv42431 Davidia involucrata HOM05D005276 ORTHO05D006813 1.1e-169 600.1 346 84.7
SEGI_35002 Sequoiadendron giganteum HOM05D005276 ORTHO05D006813 3.0e-87 326.2 314 57.0
Lj6C375G5 Lonicera japonica HOM05D005276 ORTHO05D001431 1.5e-81 307.4 220 70.5
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.9e-49 200.7 414 32.9
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 6.9e-47 192.2 418 32.1
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 1.5e-46 191.0 415 32.5
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.0e-46 190.7 431 32.0
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 4.4e-46 189.5 363 33.9
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 2.2e-45 187.2 374 34.5
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 2.9e-45 186.8 464 29.1
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.6e-43 181.0 372 34.4
Rhsim04G0165600 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.1e-43 180.6 372 35.5
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 6.6e-42 175.6 370 34.6
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 1.6e-40 171.0 380 32.9
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.4e-39 167.2 387 31.3
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.4e-38 163.3 418 30.1
Lj3g0023477 Lotus japonicus HOM05D005276 ORTHO05D006813 3.8e-37 159.8 367 32.4
VMungo0720G2128 Vigna mungo HOM05D005276 ORTHO05D006813 4.9e-37 159.5 416 27.9
PGR102G1949 Punica granatum HOM05D005276 ORTHO05D006813 7.1e-36 155.6 385 32.2
Hma1.2p1_2291F.1_g319080 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 4.6e-35 152.9 294 36.1
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 1.0e-34 151.8 357 29.1
EL10Ac4g09362 Beta vulgaris HOM05D005276 ORTHO05D006813 1.1e-31 141.7 389 29.0
vmacro00373 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 2.4e-31 140.6 369 32.2
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 1.5e-30 137.9 368 31.2
EL10Ac2g04799 Beta vulgaris HOM05D005276 ORTHO05D006813 1.4e-28 131.3 377 29.4
Phvul.007G276600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.0e-27 125.9 183 37.7
EL10Ac2g04798 Beta vulgaris HOM05D005276 ORTHO05D006813 2.3e-26 124.0 382 28.0
Rhsim10G0134800 Rhododendron simsii HOM05D005276 ORTHO05D339721 6.0e-19 99.4 160 37.5
EL10Ac1g02088 Beta vulgaris HOM05D005387 ORTHO05D006711 2.6e-14 84.0 189 33.3
AUR62037738 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.2e-13 80.9 188 33.0
EL10Ac1g02103 Beta vulgaris HOM05D005387 ORTHO05D006711 3.8e-13 80.1 196 34.2
CSS0004680 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 5.0e-13 79.7 85 48.2
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 5.5e-12 76.3 84 48.8
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 7.2e-12 75.9 83 44.6
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.2e-11 75.1 81 48.1
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.1e-11 74.3 90 37.8
TPR.G33532 Trifolium pratense HOM05D005276 ORTHO05D006813 1.3e-10 71.6 93 43.0
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 1.3e-10 71.6 94 38.3
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.8e-10 71.2 81 43.2
Phvul.007G277100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.8e-10 71.2 89 38.2
VMungo0720G2085 Vigna mungo HOM05D005276 ORTHO05D006813 1.8e-10 71.2 91 39.6
LjContig00272g0003041 Lotus japonicus HOM05D005276 ORTHO05D006813 2.3e-10 70.9 152 34.2
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 2.3e-10 70.9 94 37.2
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 3.0e-10 70.5 81 44.4
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 3.9e-10 70.1 81 45.7
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 3.9e-10 70.1 81 45.7
Phvul.007G275800 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.9e-10 70.1 89 39.3
Phvul.007G276100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.9e-10 70.1 81 42.0
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.7e-10 69.3 81 42.0
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 6.7e-10 69.3 81 42.0
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 6.7e-10 69.3 81 42.0
Phvul.009G133400 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 8.8e-10 68.9 89 37.1
Psat0s3494g0040 Pisum sativum HOM05D005276 ORTHO05D006813 8.8e-10 68.9 81 45.7
Psat1g110680 Pisum sativum HOM05D005276 ORTHO05D006813 8.8e-10 68.9 81 45.7
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 1.1e-09 68.6 81 43.2
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 1.1e-09 68.6 81 43.2
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 1.9e-09 67.8 81 45.7
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 1.9e-09 67.8 83 38.6
Medtr7g103990 Medicago truncatula HOM05D005276 ORTHO05D006813 2.5e-09 67.4 89 40.4
Phvul.007G277000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.5e-09 67.4 81 40.7
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 2.5e-09 67.4 81 45.7
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 3.3e-09 67.0 81 42.0
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.7e-09 66.2 81 39.5
Medtr6g040290 Medicago truncatula HOM05D005276 ORTHO05D006813 7.4e-09 65.9 81 43.2
Psat0s1021g0280 Pisum sativum HOM05D005276 ORTHO05D006813 7.4e-09 65.9 81 40.7
Phvul.007G275700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 9.7e-09 65.5 66 45.5
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.3e-08 65.1 103 37.9
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 1.7e-08 64.7 81 44.4
EL10Ac3g05487 Beta vulgaris HOM05D005276 ORTHO05D006813 2.2e-08 64.3 81 44.4
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 2.2e-08 64.3 81 40.7
AUR62014758 Chenopodium quinoa HOM05D005276 ORTHO05D006813 4.8e-08 63.2 81 39.5
Medtr6g045077 Medicago truncatula HOM05D005276 ORTHO05D006813 6.3e-08 62.8 84 38.1
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 6.3e-08 62.8 81 40.7
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 8.2e-08 62.4 81 39.5
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 1.1e-07 62.0 81 43.2
AUR62014887 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.4e-07 61.6 82 43.9
Phvul.007G276300 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.4e-07 61.6 72 38.9
RcHm_v2.0_Chr5g0076341 Rosa chinensis HOM05D005276 ORTHO05D006813 1.4e-07 61.6 83 45.8
TPR.G33545 Trifolium pratense HOM05D005276 ORTHO05D006813 9.1e-07 58.9 63 46.0
EL10Ac1g01354 Beta vulgaris HOM05D005276 ORTHO05D006813 1.2e-06 58.5 81 39.5
EL10Ac1g01355 Beta vulgaris HOM05D005276 ORTHO05D006813 1.2e-06 58.5 80 40.0
EL10Ac1g01356 Beta vulgaris HOM05D005276 ORTHO05D006813 1.2e-06 58.5 81 39.5
EL10Ac1g01357 Beta vulgaris HOM05D005276 ORTHO05D006813 1.2e-06 58.5 80 40.0
EL10Ac1g01358 Beta vulgaris HOM05D005276 ORTHO05D006813 1.2e-06 58.5 81 39.5
AUR62016935 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.5e-06 58.2 100 38.0
Os04g0213100 Oryza sativa ssp. japonica HOM05D005276 ORTHO05D006813 1.5e-06 58.2 83 38.6
Ah.02g117180 Amaranthus hybridus HOM05D005276 ORTHO05D006813 2.0e-06 57.8 81 42.0
EL10Ac1g01352 Beta vulgaris HOM05D005276 ORTHO05D006813 2.0e-06 57.8 81 38.3
RcHm_v2.0_Chr5g0076491 Rosa chinensis HOM05D005276 ORTHO05D006813 5.9e-06 56.2 55 50.9
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 7.7e-06 55.8 64 45.3
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 7.7e-06 55.8 64 45.3


User provided reference genes

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