Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42425 Davidia involucrata HOM05D000638 ORTHO05D000801 2.5e-68 261.9 129 100.0
COL.COLO4_21168 Corchorus olitorius HOM05D000638 ORTHO05D000801 5.0e-32 141.4 129 57.4
Haze_18368 Corylus avellana HOM05D000638 ORTHO05D000801 5.5e-31 137.9 142 52.8
Dinv25517 Davidia involucrata HOM05D000638 ORTHO05D000801 7.2e-31 137.5 160 50.0
Dinv41846 Davidia involucrata HOM05D000638 ORTHO05D000801 1.4e-29 133.3 196 43.9
TAR626G0156 Trochodendron aralioides HOM05D000638 ORTHO05D000801 2.3e-29 132.5 194 43.8
Rhsim05G0003500 Rhododendron simsii HOM05D000638 ORTHO05D000801 6.8e-29 131.0 160 47.5
Duzib150G1300 Durio zibethinus HOM05D000638 ORTHO05D000801 8.8e-29 130.6 160 46.9
Cfa017840 Carpinus fangiana HOM05D000638 ORTHO05D000801 1.5e-28 129.8 160 46.2
TAR383G0235 Trochodendron aralioides HOM05D000638 ORTHO05D000801 1.5e-28 129.8 200 43.5
Thecc.09G066300 Theobroma cacao HOM05D000638 ORTHO05D000801 2.6e-28 129.0 160 45.6
Oeu028118.1 Olea europaea HOM05D000638 ORTHO05D000801 3.4e-28 128.6 160 47.5
CAN.G210.8 Capsicum annuum HOM05D000638 ORTHO05D000801 4.4e-28 128.3 160 48.1
Duzib168G1475 Durio zibethinus HOM05D000638 ORTHO05D000801 4.4e-28 128.3 160 45.0
Lj7C691T1 Lonicera japonica HOM05D000638 ORTHO05D000801 9.8e-28 127.1 160 46.2
Sabra16G0217000 Salix brachista HOM05D000638 ORTHO05D000801 9.8e-28 127.1 160 46.9
Solyc07g042430.1 Solanum lycopersicum HOM05D000638 ORTHO05D000801 9.8e-28 127.1 160 47.5
Sopen07g022060 Solanum pennellii HOM05D000638 ORTHO05D000801 9.8e-28 127.1 160 47.5
Ciclev10010773m.g Citrus clementina HOM05D000638 ORTHO05D000801 1.3e-27 126.7 160 47.5
GSVIVG01015028001 Vitis vinifera HOM05D000638 ORTHO05D000801 1.7e-27 126.3 160 45.0
RcHm_v2.0_Chr6g0304751 Rosa chinensis HOM05D000638 ORTHO05D000801 2.2e-27 125.9 160 45.0
PGSC0003DMG400013577 Solanum tuberosum HOM05D000638 ORTHO05D000801 2.2e-27 125.9 194 43.3
Ciclev10008046m.g Citrus clementina HOM05D000638 ORTHO05D000801 2.8e-27 125.6 160 44.4
FAN20G2515 Fragaria x ananassa HOM05D000638 ORTHO05D000801 2.8e-27 125.6 160 45.6
Manes.16G087700 Manihot esculenta HOM05D000638 ORTHO05D000801 2.8e-27 125.6 160 44.4
Peaxi162Scf00191g01019 Petunia axillaris HOM05D000638 ORTHO05D000801 2.8e-27 125.6 160 45.6
DCAR_024772 Daucus carota HOM05D000638 ORTHO05D000801 3.7e-27 125.2 160 45.0
vmacro17091 Vaccinium macrocarpon HOM05D000638 ORTHO05D000801 3.7e-27 125.2 194 43.3
FAN27G2278 Fragaria x ananassa HOM05D000638 ORTHO05D000801 1.1e-26 123.6 160 45.0
VMungo1215G0195 Vigna mungo HOM05D000638 ORTHO05D000801 1.1e-26 123.6 160 43.8
Glyma.13G113100 Glycine max HOM05D000638 ORTHO05D000801 1.4e-26 123.2 160 44.4
vmacro17092 Vaccinium macrocarpon HOM05D000638 ORTHO05D000801 1.4e-26 123.2 200 42.5
CiPaw.03G202000 Carya illinoinensis HOM05D000638 ORTHO05D000801 1.8e-26 122.9 160 45.0
CiPaw.04G140500 Carya illinoinensis HOM05D000638 ORTHO05D000801 1.8e-26 122.9 160 45.0
Potri.001G335900 Populus trichocarpa HOM05D000638 ORTHO05D000801 1.8e-26 122.9 160 44.4
QL11p002282 Quercus lobata HOM05D000638 ORTHO05D000801 1.8e-26 122.9 160 45.6
QL11p002488 Quercus lobata HOM05D000638 ORTHO05D000801 1.8e-26 122.9 160 45.6
Thecc.09G071500 Theobroma cacao HOM05D000638 ORTHO05D000801 3.1e-26 122.1 160 43.1
Actinidia39625 Actinidia chinensis HOM05D000638 ORTHO05D000801 4.1e-26 121.7 160 46.9
DCAR_011923 Daucus carota HOM05D000638 ORTHO05D000801 5.4e-26 121.3 160 45.6
Rhsim03G0226000 Rhododendron simsii HOM05D000638 ORTHO05D000801 5.4e-26 121.3 161 46.0
Eucgr.C03288 Eucalyptus grandis HOM05D000638 ORTHO05D000801 7.0e-26 120.9 194 40.7
Nitab4.5_0007540g0050 Nicotiana tabacum HOM05D000638 ORTHO05D000801 7.0e-26 120.9 161 45.3
QL11p002261 Quercus lobata HOM05D000638 ORTHO05D000801 7.0e-26 120.9 160 45.0
Atru.chr7.1755 Acer truncatum HOM05D000638 ORTHO05D000801 9.2e-26 120.6 161 44.7
FvH4_2g37000 Fragaria vesca HOM05D000638 ORTHO05D000801 9.2e-26 120.6 160 43.8
Glyma.17G046600 Glycine max HOM05D000638 ORTHO05D000801 9.2e-26 120.6 160 43.1
MBI13_g01663_MAGBIO Magnolia biondii HOM05D000638 ORTHO05D000801 9.2e-26 120.6 200 41.0
Prupe.1G401400 Prunus persica HOM05D000638 ORTHO05D000801 9.2e-26 120.6 160 41.9
SalBow6G2165 Salvia bowleyana HOM05D000638 ORTHO05D000801 9.2e-26 120.6 195 42.1
Aqoxy7G04131 Aquilegia oxysepala HOM05D000638 ORTHO05D000801 1.2e-25 120.2 160 43.1
Eucgr.C00775 Eucalyptus grandis HOM05D000638 ORTHO05D000801 1.2e-25 120.2 194 41.2
TAR624G1320 Trochodendron aralioides HOM05D000638 ORTHO05D000801 1.2e-25 120.2 160 44.4
Lalb_Chr13g0299271 Lupinus albus HOM05D000638 ORTHO05D000801 1.6e-25 119.8 160 43.1
Cpa.g.sc82.77 Carica papaya HOM05D000638 ORTHO05D000801 2.0e-25 119.4 160 41.9
HanXRQChr09g0246321 Helianthus annuus HOM05D000638 ORTHO05D000801 2.0e-25 119.4 160 45.0
GSVIVG01035505001 Vitis vinifera HOM05D000638 ORTHO05D000801 2.0e-25 119.4 160 41.9
Haze_26056 Corylus avellana HOM05D000638 ORTHO05D000801 2.7e-25 119.0 160 43.8
Nn6g35651 Nelumbo nucifera HOM05D000638 ORTHO05D000801 3.5e-25 118.6 160 45.0
PGR142G0449 Punica granatum HOM05D000638 ORTHO05D000801 3.5e-25 118.6 160 42.5
Phvul.003G128133 Phaseolus vulgaris HOM05D000638 ORTHO05D000801 4.5e-25 118.2 160 43.1
arahy.Tifrunner.gnm1.ann1.7S2M5S Arachis hypogaea HOM05D000638 ORTHO05D000801 5.9e-25 117.9 161 42.9
arahy.Tifrunner.gnm1.ann1.D4TTKC Arachis hypogaea HOM05D000638 ORTHO05D000801 5.9e-25 117.9 161 42.9
Nitab4.5_0001699g0050 Nicotiana tabacum HOM05D000638 ORTHO05D000801 5.9e-25 117.9 161 44.7
COL.COLO4_21220 Corchorus olitorius HOM05D000638 ORTHO05D000801 7.8e-25 117.5 160 41.9
Duzib150G1403 Durio zibethinus HOM05D000638 ORTHO05D000801 7.8e-25 117.5 194 38.7
Lj4g0014539 Lotus japonicus HOM05D000638 ORTHO05D000801 7.8e-25 117.5 161 42.2
TWI32G0098 Tripterygium wilfordii HOM05D000638 ORTHO05D000801 7.8e-25 117.5 160 43.8
PGR142G3528 Punica granatum HOM05D000638 ORTHO05D000801 1.0e-24 117.1 160 41.9
Nn8g38552 Nelumbo nucifera HOM05D000638 ORTHO05D000801 1.3e-24 116.7 160 44.4
arahy.Tifrunner.gnm1.ann1.DCU3FP Arachis hypogaea HOM05D000638 ORTHO05D000801 1.7e-24 116.3 163 43.6
CANSAT56G3705 Cannabis sativa HOM05D000638 ORTHO05D000801 2.3e-24 115.9 160 42.5
CANSAT56G3960 Cannabis sativa HOM05D000638 ORTHO05D000801 2.3e-24 115.9 160 42.5
Gohir.A05G035500 Gossypium hirsutum HOM05D000638 ORTHO05D000801 2.9e-24 115.5 161 41.0
Gorai.009G037500 Gossypium raimondii HOM05D000638 ORTHO05D000801 2.9e-24 115.5 161 41.0
Nitab4.5_0001699g0080 Nicotiana tabacum HOM05D000638 ORTHO05D000801 2.9e-24 115.5 148 47.3
ECA240G1203 Erigeron canadensis HOM05D000638 ORTHO05D000801 3.8e-24 115.2 160 45.6
Gohir.A05G035450 Gossypium hirsutum HOM05D000638 ORTHO05D000801 3.8e-24 115.2 161 41.0
CSS0005305 Camellia sinensis var. sinensis HOM05D000638 ORTHO05D000801 5.0e-24 114.8 160 43.1
Gohir.D06G080600 Gossypium hirsutum HOM05D000638 ORTHO05D000801 5.0e-24 114.8 160 40.0
Gorai.010G094000 Gossypium raimondii HOM05D000638 ORTHO05D000801 5.0e-24 114.8 160 40.0
Potri.006G137600 Populus trichocarpa HOM05D000638 ORTHO05D000801 5.0e-24 114.8 161 42.2
TPR.G31740 Trifolium pratense HOM05D000638 ORTHO05D000801 5.0e-24 114.8 160 40.6
arahy.Tifrunner.gnm1.ann1.AZUL8B Arachis hypogaea HOM05D000638 ORTHO05D000801 6.6e-24 114.4 163 42.9
arahy.Tifrunner.gnm1.ann1.WG2NS7 Arachis hypogaea HOM05D000638 ORTHO05D000801 6.6e-24 114.4 147 44.9
TWI34G0881 Tripterygium wilfordii HOM05D000638 ORTHO05D000801 6.6e-24 114.4 160 42.5
TPR.G24675 Trifolium pratense HOM05D000638 ORTHO05D000801 8.6e-24 114.0 159 39.6
Eucgr.C00748 Eucalyptus grandis HOM05D000638 ORTHO05D000801 1.1e-23 113.6 161 42.9
Gohir.D05G037000 Gossypium hirsutum HOM05D000638 ORTHO05D000801 1.1e-23 113.6 161 40.4
MD02G1099600 Malus domestica HOM05D000638 ORTHO05D000801 1.1e-23 113.6 161 43.5
MD15G1222400 Malus domestica HOM05D000638 ORTHO05D000801 1.1e-23 113.6 161 43.5
Sabra06G0107700 Salix brachista HOM05D000638 ORTHO05D000801 1.1e-23 113.6 161 41.6
Glyma.15G181900 Glycine max HOM05D000638 ORTHO05D000801 1.9e-23 112.8 160 42.5
ClCG03G014770 Citrullus lanatus HOM05D000638 ORTHO05D000801 2.5e-23 112.5 160 40.6
Prupe.7G193500 Prunus persica HOM05D000638 ORTHO05D000801 3.3e-23 112.1 161 42.2
CANSAT25G2536 Cannabis sativa HOM05D000638 ORTHO05D000801 4.3e-23 111.7 160 41.9
EL10Ac8g18995 Beta vulgaris HOM05D000638 ORTHO05D000801 5.6e-23 111.3 139 45.3
Actinidia29947 Actinidia chinensis HOM05D000638 ORTHO05D000801 9.5e-23 110.5 164 43.3
Ca_21332_v3 Cicer arietinum L. HOM05D000638 ORTHO05D000801 1.6e-22 109.8 161 39.8
Ca_30963_v3 Cicer arietinum L. HOM05D000638 ORTHO05D000801 1.6e-22 109.8 161 39.8
Duzib168G0152 Durio zibethinus HOM05D000638 ORTHO05D000801 1.6e-22 109.8 160 40.6
Medtr2g044140 Medicago truncatula HOM05D000638 ORTHO05D000801 1.6e-22 109.8 160 39.4
THA.LOC104809046 Tarenaya hassleriana HOM05D000638 ORTHO05D000801 2.1e-22 109.4 160 41.9
Psat4g018680 Pisum sativum HOM05D000638 ORTHO05D000801 2.8e-22 109.0 160 40.0
Cc06_g12600 Coffea canephora HOM05D000638 ORTHO05D000801 3.6e-22 108.6 159 42.8
HanXRQChr03g0060041 Helianthus annuus HOM05D000638 ORTHO05D000801 3.6e-22 108.6 160 42.5
TPR.G12572 Trifolium pratense HOM05D000638 ORTHO05D000801 3.6e-22 108.6 160 39.4
arahy.Tifrunner.gnm1.ann1.6UGQ34 Arachis hypogaea HOM05D000638 ORTHO05D000801 4.7e-22 108.2 163 40.5
Medtr2g043850 Medicago truncatula HOM05D000638 ORTHO05D000801 8.0e-22 107.5 160 38.8
Psat1g138840 Pisum sativum HOM05D000638 ORTHO05D000801 8.0e-22 107.5 160 40.6
Lsat_1_v5_gn_5_139181 Lactuca sativa HOM05D000638 ORTHO05D000801 1.0e-21 107.1 160 40.6
Gohir.A06G080950 Gossypium hirsutum HOM05D000638 ORTHO05D000801 1.4e-21 106.7 149 39.6
MELO3C015551.2 Cucumis melo HOM05D000638 ORTHO05D000801 2.3e-21 105.9 160 38.1
FAN26G2516 Fragaria x ananassa HOM05D000638 ORTHO05D000801 2.3e-21 105.9 161 41.6
Medtr4g124800 Medicago truncatula HOM05D000638 ORTHO05D000801 2.3e-21 105.9 160 39.4
RcHm_v2.0_Chr2g0095771 Rosa chinensis HOM05D000638 ORTHO05D000801 2.3e-21 105.9 161 41.6
FvH4_1g09240 Fragaria vesca HOM05D000638 ORTHO05D000801 3.0e-21 105.5 161 41.6
FAN23G1820 Fragaria x ananassa HOM05D000638 ORTHO05D000801 3.0e-21 105.5 161 41.6
Ah.14g084740 Amaranthus hybridus HOM05D000638 ORTHO05D000801 5.2e-21 104.8 159 38.4
FAN26G0672 Fragaria x ananassa HOM05D000638 ORTHO05D000801 5.2e-21 104.8 161 41.6
FAN19G1194 Fragaria x ananassa HOM05D000638 ORTHO05D000801 6.8e-21 104.4 161 41.0
Sed0011606 Sechium edule HOM05D000638 ORTHO05D000801 8.9e-21 104.0 160 38.8
AUR62025299 Chenopodium quinoa HOM05D000638 ORTHO05D000801 1.2e-20 103.6 159 39.0
AUR62028305 Chenopodium quinoa HOM05D000638 ORTHO05D000801 1.2e-20 103.6 159 39.0
Manes.16G091800 Manihot esculenta HOM05D000638 ORTHO05D000801 1.2e-20 103.6 161 41.6
BcaB07g31941 Brassica carinata HOM05D000638 ORTHO05D000801 1.5e-20 103.2 172 37.8
FAN28G2986 Fragaria x ananassa HOM05D000638 ORTHO05D000801 2.0e-20 102.8 161 41.0
Lj6g0027799 Lotus japonicus HOM05D000638 ORTHO05D000801 2.0e-20 102.8 160 36.9
Sed0012768 Sechium edule HOM05D000638 ORTHO05D000801 2.0e-20 102.8 160 38.1
HPP92_004171 Vanilla planifolia HOM05D000638 ORTHO05D000801 2.6e-20 102.4 160 38.1
C05p17650 Brassica napus HOM05D000638 ORTHO05D000801 3.4e-20 102.1 160 38.8
BolC5t30468H Brassica oleracea HOM05D000638 ORTHO05D000801 3.4e-20 102.1 160 38.8
SGA_v2.0_scaffold281G46913 Striga asiatica HOM05D000638 ORTHO05D000801 4.4e-20 101.7 161 43.5
AL1G31830 Arabidopsis lyrata HOM05D000638 ORTHO05D000801 7.5e-20 100.9 160 37.5
AT1G19250 Arabidopsis thaliana HOM05D000638 ORTHO05D000801 7.5e-20 100.9 160 38.1
BraA06t24653Z Brassica rapa HOM05D000638 ORTHO05D000801 7.5e-20 100.9 160 38.8
A06p15400 Brassica napus HOM05D000638 ORTHO05D000801 9.8e-20 100.5 160 38.1
A09p59420 Brassica napus HOM05D000638 ORTHO05D000801 9.8e-20 100.5 160 38.1
BraA09t41321Z Brassica rapa HOM05D000638 ORTHO05D000801 9.8e-20 100.5 160 38.1
A08p29910 Brassica napus HOM05D000638 ORTHO05D000801 1.3e-19 100.1 160 38.1
CARHR019850 Cardamine hirsuta HOM05D000638 ORTHO05D000801 1.3e-19 100.1 160 37.5
Thhalv10007357m.g Eutrema salsugineum HOM05D000638 ORTHO05D000801 1.3e-19 100.1 160 37.5
Aa31LG7G3960 Aethionema arabicum HOM05D000638 ORTHO05D000801 1.7e-19 99.8 161 38.5
BcaC07g38993 Brassica carinata HOM05D000638 ORTHO05D000801 1.7e-19 99.8 160 38.1
C08p19330 Brassica napus HOM05D000638 ORTHO05D000801 1.7e-19 99.8 160 38.1
BcaC07g41264 Brassica carinata HOM05D000638 ORTHO05D000801 2.2e-19 99.4 160 37.5
C08p42680 Brassica napus HOM05D000638 ORTHO05D000801 2.2e-19 99.4 160 37.5
BraA08t34926Z Brassica rapa HOM05D000638 ORTHO05D000801 3.7e-19 98.6 160 37.5
BolC8t49554H Brassica oleracea HOM05D000638 ORTHO05D000801 4.9e-19 98.2 160 37.5
ClCG08G009680 Citrullus lanatus HOM05D000638 ORTHO05D000801 6.4e-19 97.8 160 35.6
AT5G45180 Arabidopsis thaliana HOM05D000638 ORTHO05D000801 1.1e-18 97.1 160 36.9
BcaB03g12923 Brassica carinata HOM05D000638 ORTHO05D000801 1.4e-18 96.7 172 35.5
BcaB03g12924 Brassica carinata HOM05D000638 ORTHO05D000801 1.4e-18 96.7 172 35.5
Sp1g17160 Schrenkiella parvula HOM05D000638 ORTHO05D000801 1.8e-18 96.3 160 38.1
PSO223G0017 Papaver somniferum HOM05D000638 ORTHO05D000801 3.2e-18 95.5 197 35.5
Carub.0001s1885 Capsella rubella HOM05D000638 ORTHO05D000801 4.1e-18 95.1 160 37.5
MELO3C026561.2 Cucumis melo HOM05D000638 ORTHO05D000801 1.2e-17 93.6 164 36.6
Medtr2g020630 Medicago truncatula HOM05D000638 ORTHO05D000801 1.2e-17 93.6 146 36.3
vmacro17089 Vaccinium macrocarpon HOM05D000638 ORTHO05D000801 1.2e-17 93.6 99 53.5
CDE06G1143 Ceratophyllum demersum HOM05D000638 ORTHO05D000801 1.6e-17 93.2 160 38.1
PSO386G0234 Papaver somniferum HOM05D000638 ORTHO05D000801 1.6e-17 93.2 161 36.6
A09p59440 Brassica napus HOM05D000638 ORTHO05D000801 2.7e-17 92.4 160 36.9
CDE04G3417 Ceratophyllum demersum HOM05D000638 ORTHO05D000801 3.5e-17 92.0 160 37.5
BcaC07g41266 Brassica carinata HOM05D000638 ORTHO05D000801 1.3e-16 90.1 160 35.0
C08p42700 Brassica napus HOM05D000638 ORTHO05D000801 1.3e-16 90.1 160 35.0
A09p59430 Brassica napus HOM05D000638 ORTHO05D000801 2.3e-16 89.4 160 35.0
BraA09t41322Z Brassica rapa HOM05D000638 ORTHO05D000801 2.3e-16 89.4 160 35.0
ATR0681G206 Amborella trichopoda HOM05D000638 ORTHO05D000801 3.0e-16 89.0 160 32.5
Lsat_1_v5_gn_7_35400 Lactuca sativa HOM05D000638 ORTHO05D000801 3.0e-16 89.0 55 70.9
Sc08g0009110 Simmondsia chinensis HOM05D000638 ORTHO05D000801 1.9e-15 86.3 164 35.4
vmacro17090 Vaccinium macrocarpon HOM05D000638 ORTHO05D000801 8.0e-14 80.9 52 73.1
CsaV3_1G041390 Cucumis sativus L. HOM05D000638 ORTHO05D000801 1.1e-13 80.5 55 61.8
MD15G1047200 Malus domestica HOM05D000638 ORTHO05D000801 4.0e-13 78.6 45 71.1
SalBow1G1601 Salvia bowleyana HOM05D000638 ORTHO05D000801 5.2e-13 78.2 58 62.1
Carub.0008s0301 Capsella rubella HOM05D000638 ORTHO05D000801 1.2e-12 77.0 52 67.3
BraA09t41323Z Brassica rapa HOM05D000638 ORTHO05D000801 8.3e-11 70.9 59 57.6
BcaC07g41267 Brassica carinata HOM05D000638 ORTHO05D000801 1.2e-09 67.0 59 54.2
C08p42730 Brassica napus HOM05D000638 ORTHO05D000801 1.2e-09 67.0 59 54.2
Zm00001eb006050 Zea mays HOM05D000638 ORTHO05D000801 1.6e-09 66.6 166 34.9
Zm00001eb401730 Zea mays HOM05D000638 ORTHO05D000801 2.0e-09 66.2 167 34.7
Migut.J00893 Erythranthe guttata HOM05D000638 ORTHO05D000801 3.5e-09 65.5 48 68.8
Lsat_1_v5_gn_7_35420 Lactuca sativa HOM05D000638 ORTHO05D000801 3.9e-08 62.0 39 76.9
SEGI_07908 Sequoiadendron giganteum HOM05D000638 ORTHO05D000801 1.9e-07 59.7 45 57.8
SEGI_10427 Sequoiadendron giganteum HOM05D000638 ORTHO05D000801 1.6e-06 56.6 48 47.9
SEGI_11391 Sequoiadendron giganteum HOM05D000638 ORTHO05D000801 2.1e-06 56.2 48 47.9


User provided reference genes

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