Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42400 Davidia involucrata HOM05D003803 ORTHO05D004456 6.5e-117 424.1 216 100.0
Dinv25550 Davidia involucrata HOM05D003803 ORTHO05D004456 6.4e-56 221.5 223 61.4
Hma1.2p1_0169F.1_g074460 Hydrangea macrophylla HOM05D003803 ORTHO05D004456 9.2e-55 217.6 123 82.9
Manes.16G094800 Manihot esculenta HOM05D003803 ORTHO05D004456 2.8e-51 206.1 124 75.8
Potri.006G141100 Populus trichocarpa HOM05D003803 ORTHO05D004456 4.7e-51 205.3 126 76.2
MD02G1093600 Malus domestica HOM05D003803 ORTHO05D004456 1.4e-50 203.8 125 76.8
MD15G1218900 Malus domestica HOM05D003803 ORTHO05D004456 1.4e-50 203.8 126 74.6
TAR624G1266 Trochodendron aralioides HOM05D003803 ORTHO05D004456 3.1e-50 202.6 124 76.6
Cc06_g12240 Coffea canephora HOM05D003803 ORTHO05D004456 1.2e-49 200.7 124 71.8
TWI34G0129 Tripterygium wilfordii HOM05D003803 ORTHO05D004456 2.2e-48 196.4 125 75.2
Manes.03G041000 Manihot esculenta HOM05D003803 ORTHO05D004456 4.9e-48 195.3 121 72.7
Prupe.7G197000 Prunus persica HOM05D003803 ORTHO05D004456 1.4e-47 193.7 125 73.6
Duzib168G2099 Durio zibethinus HOM05D003803 ORTHO05D004456 1.9e-47 193.4 126 72.2
Thecc.09G075700 Theobroma cacao HOM05D003803 ORTHO05D004456 2.4e-47 193.0 126 72.2
Migut.L01571 Erythranthe guttata HOM05D003803 ORTHO05D004456 5.4e-47 191.8 122 73.8
Nn8g38618 Nelumbo nucifera HOM05D003803 ORTHO05D004456 5.4e-47 191.8 119 75.6
CiPaw.03G205300 Carya illinoinensis HOM05D003803 ORTHO05D004456 9.2e-47 191.0 228 47.8
CiPaw.04G142500 Carya illinoinensis HOM05D003803 ORTHO05D004456 9.2e-47 191.0 126 69.0
Lalb_Chr13g0299401 Lupinus albus HOM05D003803 ORTHO05D004456 9.2e-47 191.0 126 69.8
Ciclev10010564m.g Citrus clementina HOM05D003803 ORTHO05D004456 2.1e-46 189.9 129 69.8
Solyc07g041980.3 Solanum lycopersicum HOM05D003803 ORTHO05D004456 2.1e-46 189.9 127 70.1
QL11p000998 Quercus lobata HOM05D003803 ORTHO05D004456 6.0e-46 188.3 200 54.0
TWI63G1012 Tripterygium wilfordii HOM05D003803 ORTHO05D004456 1.0e-45 187.6 107 80.4
Eucgr.C03259 Eucalyptus grandis HOM05D003803 ORTHO05D004456 1.3e-45 187.2 127 70.9
Duzib187G1358 Durio zibethinus HOM05D003803 ORTHO05D004456 3.0e-45 186.0 128 71.9
Potri.018G062400 Populus trichocarpa HOM05D003803 ORTHO05D004456 3.0e-45 186.0 119 75.6
RcHm_v2.0_Chr2g0095321 Rosa chinensis HOM05D003803 ORTHO05D004456 3.0e-45 186.0 129 70.5
SalBow5G3024 Salvia bowleyana HOM05D003803 ORTHO05D004456 1.5e-44 183.7 117 71.8
SalBow5G4531 Salvia bowleyana HOM05D003803 ORTHO05D004456 1.5e-44 183.7 117 71.8
Glyma.17G048600 Glycine max HOM05D003803 ORTHO05D004456 4.3e-44 182.2 102 79.4
Oeu007415.1 Olea europaea HOM05D003803 ORTHO05D004456 4.3e-44 182.2 110 74.5
PGR044G0570 Punica granatum HOM05D003803 ORTHO05D004456 5.6e-44 181.8 121 74.4
Duzib150G1133 Durio zibethinus HOM05D003803 ORTHO05D004456 7.3e-44 181.4 124 69.4
Phvul.003G130200 Phaseolus vulgaris HOM05D003803 ORTHO05D004456 1.6e-43 180.3 120 70.8
CAN.G595.3 Capsicum annuum HOM05D003803 ORTHO05D004456 2.1e-43 179.9 120 70.0
Lalb_Chr07g0181211 Lupinus albus HOM05D003803 ORTHO05D004456 3.6e-43 179.1 122 68.0
CARHR192170 Cardamine hirsuta HOM05D003803 ORTHO05D004456 4.7e-43 178.7 116 74.1
FvH4_1g08850 Fragaria vesca HOM05D003803 ORTHO05D004456 4.7e-43 178.7 127 70.9
MSTRG.26474 Avicennia marina HOM05D003803 ORTHO05D004456 1.1e-42 177.6 134 64.9
Gohir.A13G190300 Gossypium hirsutum HOM05D003803 ORTHO05D004456 1.8e-42 176.8 106 77.4
Gohir.D13G196350 Gossypium hirsutum HOM05D003803 ORTHO05D004456 1.8e-42 176.8 106 77.4
Sabra06G0110200 Salix brachista HOM05D003803 ORTHO05D004456 4.0e-42 175.6 214 51.9
CsaV3_2G001120 Cucumis sativus L. HOM05D003803 ORTHO05D004456 8.9e-42 174.5 110 70.0
Gorai.013G223800 Gossypium raimondii HOM05D003803 ORTHO05D004456 1.2e-41 174.1 117 71.8
Actinidia29937 Actinidia chinensis HOM05D003803 ORTHO05D004456 1.5e-41 173.7 101 75.2
CANSAT56G4286 Cannabis sativa HOM05D003803 ORTHO05D004456 2.0e-41 173.3 121 67.8
Nn6g35693 Nelumbo nucifera HOM05D003803 ORTHO05D004456 2.6e-41 172.9 127 63.8
Sp6g23850 Schrenkiella parvula HOM05D003803 ORTHO05D004456 5.8e-41 171.8 120 69.2
A10p19380 Brassica napus HOM05D003803 ORTHO05D004456 7.6e-41 171.4 119 67.2
ClCG03G015020 Citrullus lanatus HOM05D003803 ORTHO05D004456 7.6e-41 171.4 110 69.1
Actinidia30227 Actinidia chinensis HOM05D003803 ORTHO05D004456 2.2e-40 169.9 181 55.8
MELO3C015527.2 Cucumis melo HOM05D003803 ORTHO05D004456 2.2e-40 169.9 125 63.2
Oeu000278.1 Olea europaea HOM05D003803 ORTHO05D004456 6.4e-40 168.3 114 66.7
Glyma.09G070100 Glycine max HOM05D003803 ORTHO05D004456 8.4e-40 167.9 119 67.2
TPR.G12599 Trifolium pratense HOM05D003803 ORTHO05D004456 2.4e-39 166.4 126 63.5
AL6G32180 Arabidopsis lyrata HOM05D003803 ORTHO05D004456 1.2e-38 164.1 112 69.6
Gorai.001G015700 Gossypium raimondii HOM05D003803 ORTHO05D004456 1.2e-38 164.1 124 66.1
Sed0004681 Sechium edule HOM05D003803 ORTHO05D004456 1.2e-38 164.1 120 61.7
BraA10t44015Z Brassica rapa HOM05D003803 ORTHO05D004456 1.6e-38 163.7 132 61.4
Glyma.15G178100 Glycine max HOM05D003803 ORTHO05D004456 2.1e-38 163.3 112 67.0
C03p11700 Brassica napus HOM05D003803 ORTHO05D004456 2.7e-38 162.9 116 69.0
BolC3t13641H Brassica oleracea HOM05D003803 ORTHO05D004456 2.7e-38 162.9 116 69.0
Lj4g0012858 Lotus japonicus HOM05D003803 ORTHO05D004456 2.7e-38 162.9 101 70.3
A02p06390 Brassica napus HOM05D003803 ORTHO05D004456 4.6e-38 162.2 133 61.7
BraA02t05584Z Brassica rapa HOM05D003803 ORTHO05D004456 4.6e-38 162.2 133 61.7
VMungo1215G1786 Vigna mungo HOM05D003803 ORTHO05D004456 4.6e-38 162.2 91 81.3
BolC2t07055H Brassica oleracea HOM05D003803 ORTHO05D004456 6.0e-38 161.8 120 65.0
Gohir.A07G015200 Gossypium hirsutum HOM05D003803 ORTHO05D004456 1.0e-37 161.0 125 64.8
THA.LOC104799616 Tarenaya hassleriana HOM05D003803 ORTHO05D004456 1.0e-37 161.0 126 65.1
FAN28G2731 Fragaria x ananassa HOM05D003803 ORTHO05D004456 1.7e-37 160.2 109 73.4
AT5G20635 Arabidopsis thaliana HOM05D003803 ORTHO05D004456 2.3e-37 159.8 112 69.6
Carub.0006s1897 Capsella rubella HOM05D003803 ORTHO05D004456 5.1e-37 158.7 93 77.4
FAN26G0190 Fragaria x ananassa HOM05D003803 ORTHO05D004456 5.1e-37 158.7 96 79.2
Gohir.A06G077000 Gossypium hirsutum HOM05D003803 ORTHO05D004456 5.1e-37 158.7 126 64.3
A03p10180 Brassica napus HOM05D003803 ORTHO05D004456 1.5e-36 157.1 118 66.1
BraA03t10328Z Brassica rapa HOM05D003803 ORTHO05D004456 1.5e-36 157.1 118 66.1
Psat4g018440 Pisum sativum HOM05D003803 ORTHO05D004456 1.9e-36 156.8 86 79.1
PSO421G0234 Papaver somniferum HOM05D003803 ORTHO05D004456 2.8e-35 152.9 110 64.5
Lj6g0024210 Lotus japonicus HOM05D003803 ORTHO05D004456 3.6e-35 152.5 125 60.0
GSVIVG01015067001 Vitis vinifera HOM05D003803 ORTHO05D004456 3.6e-35 152.5 118 66.1
Gorai.010G088900 Gossypium raimondii HOM05D003803 ORTHO05D004456 4.8e-35 152.1 128 61.7
MSTRG.10505 Avicennia marina HOM05D003803 ORTHO05D004456 6.2e-35 151.8 117 66.7
Glyma.13G110900 Glycine max HOM05D003803 ORTHO05D004456 6.2e-35 151.8 90 75.6
Nitab4.5_0000343g0290 Nicotiana tabacum HOM05D003803 ORTHO05D004456 1.1e-34 151.0 101 73.3
BcaB01g04775 Brassica carinata HOM05D003803 ORTHO05D004456 1.4e-34 150.6 85 82.4
Gohir.D06G076000 Gossypium hirsutum HOM05D003803 ORTHO05D004456 1.8e-34 150.2 128 61.7
Psat1g134600 Pisum sativum HOM05D003803 ORTHO05D004456 1.8e-34 150.2 124 60.5
PSO104G0196 Papaver somniferum HOM05D003803 ORTHO05D004456 4.0e-34 149.1 110 61.8
Sopen07g021560 Solanum pennellii HOM05D003803 ORTHO05D004456 7.6e-33 144.8 104 69.2
Medtr2g042200 Medicago truncatula HOM05D003803 ORTHO05D004456 1.3e-32 144.1 89 73.0
Thhalv10014548m.g Eutrema salsugineum HOM05D003803 ORTHO05D004456 2.2e-32 143.3 125 60.8
Sc18g0002620 Simmondsia chinensis HOM05D003803 ORTHO05D004456 3.8e-32 142.5 114 61.4
TPR.G8075 Trifolium pratense HOM05D003803 ORTHO05D004456 6.4e-32 141.7 89 74.2
THA.LOC104810996 Tarenaya hassleriana HOM05D003803 ORTHO05D004456 1.1e-31 141.0 121 59.5
Actinidia39653 Actinidia chinensis HOM05D003803 ORTHO05D004456 3.2e-31 139.4 197 49.7
C09p55600 Brassica napus HOM05D003803 ORTHO05D004456 4.2e-31 139.0 102 65.7
Gohir.D07G014900 Gossypium hirsutum HOM05D003803 ORTHO05D004456 7.1e-31 138.3 124 58.9
BolC9t58422H Brassica oleracea HOM05D003803 ORTHO05D004456 2.1e-30 136.7 122 56.6
arahy.Tifrunner.gnm1.ann1.TX00RK Arachis hypogaea HOM05D003803 ORTHO05D004456 3.5e-30 136.0 93 71.0
arahy.Tifrunner.gnm1.ann1.AJ3133 Arachis hypogaea HOM05D003803 ORTHO05D004456 7.9e-30 134.8 93 69.9
Manes.11G018700 Manihot esculenta HOM05D003803 ORTHO05D004456 1.8e-29 133.7 131 52.7
Lalb_Chr11g0074261 Lupinus albus HOM05D003803 ORTHO05D004456 3.0e-29 132.9 104 59.6
Cpa.g.sc28.25 Carica papaya HOM05D003803 ORTHO05D004456 3.3e-28 129.4 219 44.3
Peaxi162Scf00348g00817 Petunia axillaris HOM05D003803 ORTHO05D004456 7.4e-28 128.3 74 83.8
Sed0026577 Sechium edule HOM05D003803 ORTHO05D004456 1.1e-26 124.4 79 75.9
DCAR_024755 Daucus carota HOM05D003803 ORTHO05D004456 2.0e-25 120.2 116 54.3
FAN23G2205 Fragaria x ananassa HOM05D003803 ORTHO05D004456 9.9e-25 117.9 70 82.9
HanXRQChr10g0319741 Helianthus annuus HOM05D003803 ORTHO05D004456 1.3e-24 117.5 98 67.3
HPP92_004363 Vanilla planifolia HOM05D003803 ORTHO05D004456 1.3e-24 117.5 93 58.1
Zm00001eb314160 Zea mays HOM05D003803 ORTHO05D004456 1.3e-24 117.5 117 49.6
Sed0024871 Sechium edule HOM05D003803 ORTHO05D004456 4.9e-24 115.5 120 51.7
Sc15g0000470 Simmondsia chinensis HOM05D003803 ORTHO05D004456 6.4e-24 115.2 125 49.6
MELO3C004657.2 Cucumis melo HOM05D003803 ORTHO05D004456 8.4e-24 114.8 207 41.5
Rhsim03G0227100 Rhododendron simsii HOM05D003803 ORTHO05D004456 1.9e-23 113.6 223 41.7
Zm00001eb100230 Zea mays HOM05D003803 ORTHO05D004456 3.2e-23 112.8 110 50.9
BcaB08g36515 Brassica carinata HOM05D003803 ORTHO05D004456 2.1e-22 110.2 61 83.6
FAN19G2912 Fragaria x ananassa HOM05D003803 ORTHO05D004456 2.1e-22 110.2 66 83.3
ATR0598G175 Amborella trichopoda HOM05D003803 ORTHO05D004456 2.7e-22 109.8 92 56.5
RcHm_v2.0_Chr6g0246401 Rosa chinensis HOM05D003803 ORTHO05D004456 3.5e-22 109.4 82 59.8
Atru.chr7.1717 Acer truncatum HOM05D003803 ORTHO05D004456 6.0e-22 108.6 65 83.1
Aqoxy7G01029 Aquilegia oxysepala HOM05D003803 ORTHO05D004456 1.0e-21 107.8 208 39.4
Os08g0456600 Oryza sativa ssp. japonica HOM05D003803 ORTHO05D004456 1.3e-21 107.5 85 54.1
Hma1.2p1_0179F.1_g079480 Hydrangea macrophylla HOM05D003803 ORTHO05D004456 2.3e-21 106.7 129 51.9
Haze_26022 Corylus avellana HOM05D003803 ORTHO05D004456 5.1e-21 105.5 216 39.4
SGA_v2.0_scaffold21G09503 Striga asiatica HOM05D003803 ORTHO05D004456 1.5e-20 104.0 90 63.3
CsaV3_1G041120 Cucumis sativus L. HOM05D003803 ORTHO05D004456 1.9e-20 103.6 99 56.6
arahy.Tifrunner.gnm1.ann1.1Y26QK Arachis hypogaea HOM05D003803 ORTHO05D004456 2.5e-20 103.2 95 54.7
arahy.Tifrunner.gnm1.ann1.KPGD7J Arachis hypogaea HOM05D003803 ORTHO05D004456 2.5e-20 103.2 95 54.7
CDE05G2490 Ceratophyllum demersum HOM05D003803 ORTHO05D004456 3.3e-20 102.8 120 48.3
Hund26046 Selenicereus undatus HOM05D003803 ORTHO05D004456 1.3e-19 100.9 69 69.6
HPP92_016238 Vanilla planifolia HOM05D003803 ORTHO05D004456 3.7e-19 99.4 89 57.3
Os09g0441900 Oryza sativa ssp. japonica HOM05D003803 ORTHO05D004456 3.1e-18 96.3 91 50.5
ClCG11G001400 Citrullus lanatus HOM05D003803 ORTHO05D004456 5.8e-17 92.0 211 36.5
Medtr8g021170 Medicago truncatula HOM05D003803 ORTHO05D004456 7.6e-17 91.7 119 44.5
QL05p003994 Quercus lobata HOM05D003803 ORTHO05D004456 1.0e-16 91.3 97 52.6
Ca_02184_v3 Cicer arietinum L. HOM05D003803 ORTHO05D004456 2.2e-16 90.1 60 73.3
Lalb_Chr04g0263591 Lupinus albus HOM05D003803 ORTHO05D004456 4.9e-16 89.0 96 50.0
Atru.chr1.4007 Acer truncatum HOM05D003803 ORTHO05D004456 6.5e-16 88.6 69 63.8
Thecc.06G122400 Theobroma cacao HOM05D003803 ORTHO05D004456 8.4e-16 88.2 120 44.2
Rhsim05G0007000 Rhododendron simsii HOM05D003803 ORTHO05D004456 1.9e-15 87.0 188 39.9
Lsat_1_v5_gn_4_94241 Lactuca sativa HOM05D003803 ORTHO05D004456 3.2e-15 86.3 115 44.3
Zm00001eb019600 Zea mays HOM05D003803 ORTHO05D004456 9.3e-15 84.7 123 43.9
vmacro06347 Vaccinium macrocarpon HOM05D003803 ORTHO05D004456 1.2e-14 84.3 167 40.1
CSS0005199 Camellia sinensis var. sinensis HOM05D003803 ORTHO05D004456 1.6e-14 84.0 208 37.5
COL.COLO4_30738 Corchorus olitorius HOM05D003803 ORTHO05D004456 2.1e-14 83.6 73 56.2
HanXRQChr12g0354391 Helianthus annuus HOM05D003803 ORTHO05D004456 2.7e-14 83.2 123 45.5
Glyma.07G040200 Glycine max HOM05D003803 ORTHO05D004456 4.6e-14 82.4 98 44.9
MBI13_g43925_MAGBIO Magnolia biondii HOM05D003803 ORTHO05D004456 4.6e-14 82.4 50 72.0
SGA_v2.0_scaffold609G53181 Striga asiatica HOM05D003803 ORTHO05D004456 6.0e-14 82.0 90 55.6
SEGI_34897 Sequoiadendron giganteum HOM05D003803 ORTHO05D004456 7.9e-14 81.6 72 48.6
ECA232G3825 Erigeron canadensis HOM05D003803 ORTHO05D004456 3.0e-13 79.7 80 50.0
Os03g0407400 Oryza sativa ssp. japonica HOM05D003803 ORTHO05D004456 3.9e-13 79.3 101 44.6
TAR636G1611 Trochodendron aralioides HOM05D003803 ORTHO05D004456 3.9e-13 79.3 214 34.1
unitig_699.g19272 Utricularia gibba HOM05D003803 ORTHO05D004456 3.9e-13 79.3 47 80.9
FAN26G2608 Fragaria x ananassa HOM05D003803 ORTHO05D004456 5.1e-13 79.0 48 83.3
PGSC0003DMG400027887 Solanum tuberosum HOM05D003803 ORTHO05D004456 5.1e-13 79.0 48 75.0
Nitab4.5_0009541g0010 Nicotiana tabacum HOM05D003803 ORTHO05D004456 6.7e-13 78.6 45 82.2
COL.COLO4_18088 Corchorus olitorius HOM05D003803 ORTHO05D004456 2.5e-12 76.6 47 80.9
Ca_09305_v3 Cicer arietinum L. HOM05D003803 ORTHO05D004456 3.3e-12 76.3 42 85.7
HanXRQChr09g0276811 Helianthus annuus HOM05D003803 ORTHO05D004456 3.3e-12 76.3 79 48.1
RcHm_v2.0_Chr6g0246681 Rosa chinensis HOM05D003803 ORTHO05D004456 3.3e-12 76.3 61 55.7
TPR.G16739 Trifolium pratense HOM05D003803 ORTHO05D004456 3.3e-12 76.3 61 57.4
unitig_85.g27251 Utricularia gibba HOM05D003803 ORTHO05D004456 7.4e-12 75.1 38 89.5
BcaC03g13781 Brassica carinata HOM05D003803 ORTHO05D004456 3.7e-11 72.8 45 77.8
Psat4g168440 Pisum sativum HOM05D003803 ORTHO05D004456 4.8e-11 72.4 71 54.9
BcaB05g22827 Brassica carinata HOM05D003803 ORTHO05D004456 6.3e-11 72.0 44 79.5
Oeu060649.1 Olea europaea HOM05D003803 ORTHO05D004456 1.8e-10 70.5 50 74.0
SEGI_33452 Sequoiadendron giganteum HOM05D003803 ORTHO05D004456 6.9e-10 68.6 99 38.4
Haze_16046 Corylus avellana HOM05D000015 ORTHO05D000249 1.7e-08 63.9 102 44.1
Lj7A687T57 Lonicera japonica HOM05D003803 ORTHO05D004456 2.5e-07 60.1 59 57.6
AagrBONN_evm.TU.Sc2ySwM_362.2112 Anthoceros agrestis HOM05D002369 ORTHO05D002435 5.5e-07 58.9 95 32.6
Hma1.2p1_0291F.1_g114940 Hydrangea macrophylla HOM05D003803 ORTHO05D004456 1.2e-06 57.8 37 73.0
THA.LOC104808881 Tarenaya hassleriana HOM05D003803 ORTHO05D004456 1.2e-06 57.8 48 60.4
ATR0626G331 Amborella trichopoda HOM05D002369 ORTHO05D002435 2.7e-06 56.6 71 42.3
Thhalv10021823m.g Eutrema salsugineum HOM05D002369 ORTHO05D002435 2.7e-06 56.6 55 49.1
Hund20657 Selenicereus undatus HOM05D002369 ORTHO05D002435 2.7e-06 56.6 59 47.5
ClCG05G004760 Citrullus lanatus HOM05D002369 ORTHO05D002435 4.6e-06 55.8 55 50.9
Ah.09g229300 Amaranthus hybridus HOM05D003803 ORTHO05D004456 6.1e-06 55.5 32 62.5
Duzib212G0042 Durio zibethinus HOM05D002369 ORTHO05D002435 6.1e-06 55.5 77 45.5
MELO3C006489.2 Cucumis melo HOM05D002369 ORTHO05D002435 7.9e-06 55.1 85 37.6
CsaV3_3G012780 Cucumis sativus L. HOM05D002369 ORTHO05D002435 7.9e-06 55.1 85 36.5
Medtr4g125015 Medicago truncatula HOM05D003803 ORTHO05D004456 7.9e-06 55.1 27 88.9


User provided reference genes

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