Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42395 Davidia involucrata HOM05D002335 ORTHO05D006282 1.9e-174 615.9 355 100.0
Dinv25558 Davidia involucrata HOM05D002335 ORTHO05D006282 9.5e-158 560.5 341 94.1
CSS0005090 Camellia sinensis var. sinensis HOM05D002335 ORTHO05D006282 1.3e-151 540.0 359 87.2
GSVIVG01015081001 Vitis vinifera HOM05D002335 ORTHO05D006282 5.6e-150 534.6 345 88.1
Hma1.2p1_0169F.1_g074510 Hydrangea macrophylla HOM05D002335 ORTHO05D006282 2.8e-149 532.3 343 83.7
CiPaw.04G143000 Carya illinoinensis HOM05D002335 ORTHO05D006282 9.9e-147 523.9 354 79.4
Cfa002987 Carpinus fangiana HOM05D002335 ORTHO05D006282 1.9e-145 519.6 344 80.8
Ciclev10008755m.g Citrus clementina HOM05D002335 ORTHO05D006282 1.7e-143 513.1 346 79.8
Thecc.09G076700 Theobroma cacao HOM05D002335 ORTHO05D006282 2.3e-143 512.7 344 85.8
Duzib187G0696 Durio zibethinus HOM05D002335 ORTHO05D006282 3.9e-143 511.9 352 84.7
Gohir.D13G196375 Gossypium hirsutum HOM05D002335 ORTHO05D006282 2.5e-142 509.2 353 77.6
Gorai.013G224300 Gossypium raimondii HOM05D002335 ORTHO05D006282 6.2e-141 504.6 354 77.4
Nn8g38636 Nelumbo nucifera HOM05D002335 ORTHO05D006282 5.3e-140 501.5 350 80.9
Gohir.A13G190800 Gossypium hirsutum HOM05D002335 ORTHO05D006282 6.9e-140 501.1 353 76.8
Migut.J00924 Erythranthe guttata HOM05D002335 ORTHO05D006282 2.0e-139 499.6 353 76.2
TAR383G0969 Trochodendron aralioides HOM05D002335 ORTHO05D006282 4.9e-138 495.0 349 80.8
MSTRG.19458 Avicennia marina HOM05D002335 ORTHO05D006282 8.4e-138 494.2 354 81.6
Glyma.15G177700 Glycine max HOM05D002335 ORTHO05D006282 1.4e-137 493.4 346 75.7
Actinidia29935 Actinidia chinensis HOM05D002335 ORTHO05D006282 3.2e-137 492.3 349 83.7
COL.COLO4_18096 Corchorus olitorius HOM05D002335 ORTHO05D006282 3.2e-137 492.3 352 82.7
Cc06_g12190 Coffea canephora HOM05D002335 ORTHO05D006282 4.2e-137 491.9 355 79.7
Potri.018G056500 Populus trichocarpa HOM05D002335 ORTHO05D006282 4.2e-137 491.9 352 76.7
Ca_02205_v3 Cicer arietinum L. HOM05D002335 ORTHO05D006282 5.4e-137 491.5 354 81.4
FvH4_1g08690 Fragaria vesca HOM05D002335 ORTHO05D006282 7.1e-137 491.1 352 76.1
RcHm_v2.0_Chr2g0095141 Rosa chinensis HOM05D002335 ORTHO05D006282 1.2e-136 490.3 351 81.2
Solyc12g009100.2 Solanum lycopersicum HOM05D002335 ORTHO05D006282 3.5e-136 488.8 345 74.8
Sopen12g004050 Solanum pennellii HOM05D002335 ORTHO05D006282 4.6e-136 488.4 345 75.1
Glyma.09G069700 Glycine max HOM05D002335 ORTHO05D006282 1.0e-135 487.3 345 78.3
Lj6g0009960 Lotus japonicus HOM05D002335 ORTHO05D006282 1.0e-135 487.3 355 78.3
VMungo1309G0226 Vigna mungo HOM05D002335 ORTHO05D006282 1.3e-135 486.9 354 73.4
Aqoxy7G04129 Aquilegia oxysepala HOM05D002335 ORTHO05D006282 1.7e-135 486.5 352 79.3
ClCG03G015070 Citrullus lanatus HOM05D002335 ORTHO05D006282 1.7e-135 486.5 346 74.6
MD02G1091400 Malus domestica HOM05D002335 ORTHO05D006282 1.7e-135 486.5 356 79.5
FAN26G1551 Fragaria x ananassa HOM05D002335 ORTHO05D006282 1.5e-134 483.4 352 81.5
Peaxi162Scf00928g00036 Petunia axillaris HOM05D002335 ORTHO05D006282 1.9e-134 483.0 325 78.2
TPR.G27760 Trifolium pratense HOM05D002335 ORTHO05D006282 3.3e-134 482.3 352 74.1
Phvul.009G227200 Phaseolus vulgaris HOM05D002335 ORTHO05D006282 4.3e-134 481.9 354 72.3
FAN28G1803 Fragaria x ananassa HOM05D002335 ORTHO05D006282 5.6e-134 481.5 352 81.0
CANSAT56G2952 Cannabis sativa HOM05D002335 ORTHO05D006282 7.3e-134 481.1 358 80.4
Duzib168G0796 Durio zibethinus HOM05D002335 ORTHO05D006282 7.3e-134 481.1 338 83.1
Sed0016034 Sechium edule HOM05D002335 ORTHO05D006282 9.6e-134 480.7 346 73.7
PSO135G0390 Papaver somniferum HOM05D002335 ORTHO05D006282 1.4e-132 476.9 352 70.7
MBI19_g16223_MAGBIO Magnolia biondii HOM05D002335 ORTHO05D006282 2.4e-132 476.1 350 76.9
Eucgr.C03328 Eucalyptus grandis HOM05D002335 ORTHO05D006282 5.3e-132 474.9 346 76.0
Medtr2g041690 Medicago truncatula HOM05D002335 ORTHO05D006282 1.2e-131 473.8 354 78.5
Carub.0003s2712 Capsella rubella HOM05D002335 ORTHO05D006282 1.5e-131 473.4 350 78.3
PSO724G0129 Papaver somniferum HOM05D002335 ORTHO05D006282 1.5e-131 473.4 352 69.9
TWI34G0307 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 4.5e-131 471.9 357 73.1
THA.LOC104815334 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 9.9e-131 470.7 346 74.6
MELO3C015522.2 Cucumis melo HOM05D002335 ORTHO05D006282 2.9e-130 469.2 346 79.2
CsaV3_1G041060 Cucumis sativus L. HOM05D002335 ORTHO05D006282 2.9e-130 469.2 346 79.2
Manes.16G095200 Manihot esculenta HOM05D002335 ORTHO05D006282 8.4e-130 467.6 345 74.2
MD15G1217700 Malus domestica HOM05D002335 ORTHO05D006282 2.1e-128 463.0 323 84.2
HanXRQChr04g0126011 Helianthus annuus HOM05D002335 ORTHO05D006282 2.7e-128 462.6 346 72.8
Aa31sc133G10 Aethionema arabicum HOM05D002335 ORTHO05D006282 1.0e-127 460.7 344 72.7
AL3G43580 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 1.5e-126 456.8 340 78.8
Sabra18G0052300 Salix brachista HOM05D002335 ORTHO05D006282 2.5e-126 456.1 431 62.2
Sp3g24570 Schrenkiella parvula HOM05D002335 ORTHO05D006282 3.3e-126 455.7 352 74.7
ECA236G4601 Erigeron canadensis HOM05D002335 ORTHO05D006282 1.6e-125 453.4 343 70.3
EL10Ac8g19056 Beta vulgaris HOM05D002335 ORTHO05D006282 8.1e-125 451.1 368 68.5
AUR62028934 Chenopodium quinoa HOM05D002335 ORTHO05D006282 8.1e-125 451.1 340 71.8
Prupe.7G198700 Prunus persica HOM05D002335 ORTHO05D006282 1.4e-124 450.3 356 77.2
BcaB06g26879 Brassica carinata HOM05D002335 ORTHO05D006282 2.4e-124 449.5 352 70.5
Haze_26014 Corylus avellana HOM05D002335 ORTHO05D006282 1.5e-123 446.8 382 67.8
A07p06320 Brassica napus HOM05D002335 ORTHO05D006282 2.2e-122 443.0 340 71.2
QL11p000781 Quercus lobata HOM05D002335 ORTHO05D006282 6.4e-122 441.4 382 73.8
BcaC06g35950 Brassica carinata HOM05D002335 ORTHO05D006282 1.1e-121 440.7 355 69.3
C07p09370 Brassica napus HOM05D002335 ORTHO05D006282 1.4e-121 440.3 340 71.2
BolC7t41360H Brassica oleracea HOM05D002335 ORTHO05D006282 1.4e-121 440.3 340 71.2
HPP92_004364 Vanilla planifolia HOM05D002335 ORTHO05D006282 1.4e-121 440.3 338 72.5
Lsat_1_v5_gn_8_86481 Lactuca sativa HOM05D002335 ORTHO05D006282 1.9e-121 439.9 344 68.9
Nitab4.5_0011754g0010 Nicotiana tabacum HOM05D002335 ORTHO05D006282 5.5e-121 438.3 345 71.0
Sopen07g021360 Solanum pennellii HOM05D002335 ORTHO05D006282 1.2e-120 437.2 331 77.6
Eucgr.C03263 Eucalyptus grandis HOM05D002335 ORTHO05D006282 2.1e-120 436.4 320 75.0
BraA07t28424Z Brassica rapa HOM05D002335 ORTHO05D006282 3.5e-120 435.6 356 68.5
SGA_v2.0_scaffold308G48076 Striga asiatica HOM05D002335 ORTHO05D006282 2.5e-118 429.5 372 68.3
Atru.chr7.1708 Acer truncatum HOM05D002335 ORTHO05D006282 4.3e-118 428.7 283 80.2
Thhalv10014003m.g Eutrema salsugineum HOM05D002335 ORTHO05D006282 7.4e-118 427.9 345 66.4
Manes.03G040500 Manihot esculenta HOM05D002335 ORTHO05D006282 1.6e-117 426.8 354 69.2
Sp6g23900 Schrenkiella parvula HOM05D002335 ORTHO05D006282 2.8e-117 426.0 346 66.5
CAN.G1661.12 Capsicum annuum HOM05D002335 ORTHO05D006282 8.2e-117 424.5 349 69.1
Lsat_1_v5_gn_7_35121 Lactuca sativa HOM05D002335 ORTHO05D006692 1.8e-116 423.3 337 76.0
AL6G32120 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 3.1e-116 422.5 346 66.2
C03p11680 Brassica napus HOM05D002335 ORTHO05D006282 3.1e-116 422.5 346 65.9
BraA03t10325Z Brassica rapa HOM05D002335 ORTHO05D006282 3.1e-116 422.5 346 65.9
Carub.0006s1891 Capsella rubella HOM05D002335 ORTHO05D006282 4.0e-116 422.2 346 65.9
PGR044G1875 Punica granatum HOM05D002335 ORTHO05D006282 5.3e-116 421.8 302 80.5
vmacro06343 Vaccinium macrocarpon HOM05D002335 ORTHO05D006282 1.2e-115 420.6 412 63.6
ATR0598G025 Amborella trichopoda HOM05D002335 ORTHO05D006282 2.6e-115 419.5 349 64.5
TWI63G1279 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 2.6e-115 419.5 345 75.1
AT5G20580 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 4.5e-115 418.7 346 65.6
AUR62025250 Chenopodium quinoa HOM05D002335 ORTHO05D006282 4.5e-115 418.7 326 70.2
SalBow6G4624 Salvia bowleyana HOM05D002335 ORTHO05D006282 5.8e-115 418.3 367 66.2
THA.LOC104799620 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 6.5e-114 414.8 331 68.3
Rhsim03G0227400 Rhododendron simsii HOM05D002335 ORTHO05D005129 2.1e-112 409.8 399 67.9
Hund26035 Selenicereus undatus HOM05D002335 ORTHO05D006282 4.3e-110 402.1 297 71.0
arahy.Tifrunner.gnm1.ann1.UHGN3W Arachis hypogaea HOM05D002335 ORTHO05D006282 3.1e-108 396.0 340 71.5
CARHR103630 Cardamine hirsuta HOM05D002335 ORTHO05D006282 4.1e-108 395.6 313 76.7
Psat1g134320 Pisum sativum HOM05D002335 ORTHO05D006282 9.4e-105 384.4 274 82.1
Zm00001eb256890 Zea mays HOM05D002335 ORTHO05D006282 1.6e-104 383.6 339 61.1
AT2G06005 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 4.3e-102 375.6 290 78.3
Nitab4.5_0000073g0170 Nicotiana tabacum HOM05D002335 ORTHO05D006282 4.3e-102 375.6 399 57.4
BolC3t13639H Brassica oleracea HOM05D005537 ORTHO05D006776 3.1e-100 369.4 297 67.3
Psat3g025000 Pisum sativum HOM05D002335 ORTHO05D006282 4.1e-100 369.0 248 76.2
CARHR192220 Cardamine hirsuta HOM05D002335 ORTHO05D006282 4.5e-99 365.5 295 67.8
HPP92_004366 Vanilla planifolia HOM05D002335 ORTHO05D006282 3.8e-98 362.5 338 63.3
Cpa.g.sc28.33 Carica papaya HOM05D002335 ORTHO05D006282 4.4e-94 349.0 229 79.0
Aa31LG1G14100 Aethionema arabicum HOM05D002335 ORTHO05D006282 7.0e-92 341.7 440 48.4
Nitab4.5_0009436g0040 Nicotiana tabacum HOM05D002335 ORTHO05D006282 4.5e-91 339.0 409 53.3
SEGI_06962 Sequoiadendron giganteum HOM05D002335 ORTHO05D006282 4.2e-89 332.4 350 54.0
Sc18g0002560 Simmondsia chinensis HOM05D002335 ORTHO05D006282 5.5e-89 332.0 246 82.9
SHI23809 Sapria himalayana HOM05D002335 ORTHO05D006282 1.6e-83 313.9 235 74.0
Lj7C687T14 Lonicera japonica HOM05D002335 ORTHO05D006282 5.9e-83 312.0 261 69.7
FAN23G1616 Fragaria x ananassa HOM05D002335 ORTHO05D006282 1.5e-81 307.4 244 72.1
Peaxi162Scf00127g01814 Petunia axillaris HOM05D002335 ORTHO05D006282 4.7e-80 302.4 240 72.5
CDE02G0868 Ceratophyllum demersum HOM05D002335 ORTHO05D006282 1.3e-77 294.3 228 68.9
Lalb_Chr23g0276371 Lupinus albus HOM05D002335 ORTHO05D006282 3.5e-75 286.2 204 71.1
arahy.Tifrunner.gnm1.ann1.3UYF95 Arachis hypogaea HOM05D002335 ORTHO05D006282 2.1e-72 276.9 223 65.0
CAN.G404.48 Capsicum annuum HOM05D002335 ORTHO05D006282 2.7e-72 276.6 302 55.6
Lalb_Chr07g0181191 Lupinus albus HOM05D002335 ORTHO05D006282 4.7e-72 275.8 238 61.3
DCAR_028335 Daucus carota HOM05D002335 ORTHO05D006282 9.1e-68 261.5 201 77.6
Pp3c22_13730 Physcomitrium patens HOM05D002335 ORTHO05D006282 1.6e-64 250.8 327 44.6
Mapoly0011s0025 Marchantia polymorpha HOM05D002335 ORTHO05D006282 6.3e-61 238.8 336 41.7
Actinidia38482 Actinidia chinensis HOM05D002335 ORTHO05D006282 1.4e-60 237.7 148 82.4
Pp3c2_6470 Physcomitrium patens HOM05D002335 ORTHO05D006282 7.8e-59 231.9 357 40.6
Nitab4.5_0000343g0220 Nicotiana tabacum HOM05D002335 ORTHO05D006282 3.0e-50 203.4 129 79.8
MD02G1091600 Malus domestica HOM05D002335 ORTHO05D006282 4.3e-49 199.5 150 68.0
Lalb_Chr07g0181181 Lupinus albus HOM05D002335 ORTHO05D006282 6.4e-45 185.7 161 75.8
Lalb_Chr23g0276381 Lupinus albus HOM05D002335 ORTHO05D006282 2.7e-43 180.3 144 72.2
SMO358G0254 Selaginella moellendorffii HOM05D002335 ORTHO05D006282 3.6e-40 169.9 196 51.5
Actinidia38481 Actinidia chinensis HOM05D002335 ORTHO05D006282 4.4e-38 162.9 128 89.1
Solyc07g041890.1 Solanum lycopersicum HOM05D002335 ORTHO05D006282 4.4e-30 136.3 182 48.9
AagrBONN_evm.TU.Sc2ySwM_344.5493 Anthoceros agrestis HOM05D002335 ORTHO05D006282 1.7e-29 134.4 321 31.5
Cpa.g.sc28.37 Carica papaya HOM05D002335 ORTHO05D006282 4.3e-25 119.8 110 65.5
Medtr2g041390 Medicago truncatula HOM05D002335 ORTHO05D006282 1.3e-24 118.2 110 83.6
Nitab4.5_0000343g0210 Nicotiana tabacum HOM05D002335 ORTHO05D006282 1.3e-24 118.2 98 68.4
Oeu011491.2 Olea europaea HOM05D002335 ORTHO05D006282 3.1e-23 113.6 78 73.1
arahy.Tifrunner.gnm1.ann1.HK8DFN Arachis hypogaea HOM05D002335 ORTHO05D006282 3.2e-20 103.6 99 53.5
CBR_g26318 Chara braunii HOM05D002335 ORTHO05D006282 2.1e-19 100.9 218 33.5
Oeu031390.1 Olea europaea HOM05D002335 ORTHO05D006282 1.8e-15 87.8 50 86.0
Psat6g064600 Pisum sativum HOM05D004726 ORTHO05D005986 9.9e-14 82.0 53 81.1
Ah.14g084930 Amaranthus hybridus HOM05D002335 ORTHO05D006282 1.9e-12 77.8 77 55.8
arahy.Tifrunner.gnm1.ann1.S4WZ34 Arachis hypogaea HOM05D000237 ORTHO05D017465 7.1e-12 75.9 57 56.1
arahy.Tifrunner.gnm1.ann1.WCUD5S Arachis hypogaea HOM05D000237 ORTHO05D017465 3.0e-10 70.5 56 55.4
arahy.Tifrunner.gnm1.ann1.Y6L4BT Arachis hypogaea HOM05D000237 ORTHO05D017465 1.9e-09 67.8 72 44.4
PGSC0003DMG400019032 Solanum tuberosum HOM05D002335 ORTHO05D006282 2.8e-08 63.9 39 82.1
FvH4_1g08700 Fragaria vesca HOM05D000069 ORTHO05D021424 1.8e-07 61.2 44 68.2
arahy.Tifrunner.gnm1.ann1.9B3XF4 Arachis hypogaea HOM05D000237 ORTHO05D017465 4.0e-07 60.1 47 55.3
arahy.Tifrunner.gnm1.ann1.2X24PF Arachis hypogaea HOM05D002335 ORTHO05D006282 4.5e-06 56.6 56 55.4
FAN23G2278 Fragaria x ananassa HOM05D002335 ORTHO05D200751 7.6e-06 55.8 32 90.6


User provided reference genes

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