Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42361 Davidia involucrata HOM05D008239 ORTHO05D009800 5.0e-151 537.7 266 100.0
Dinv38087 Davidia involucrata HOM05D008239 ORTHO05D009800 6.6e-63 245.0 260 50.0
Dinv42358 Davidia involucrata HOM05D008239 ORTHO05D009800 1.1e-60 237.7 230 57.4
Dinv27632 Davidia involucrata HOM05D008239 ORTHO05D009800 2.6e-59 233.0 256 49.2
Dinv30486 Davidia involucrata HOM05D010983 ORTHO05D009800 1.8e-55 220.3 257 45.5
Dinv04007 Davidia involucrata HOM05D008239 ORTHO05D009800 1.4e-49 200.7 273 42.9
Dinv12606 Davidia involucrata HOM05D008239 ORTHO05D009800 3.9e-47 192.6 274 41.6
Dinv07268 Davidia involucrata HOM05D008239 ORTHO05D009800 5.3e-44 182.2 248 43.1
Dinv23282 Davidia involucrata HOM05D008239 ORTHO05D009800 7.6e-43 178.3 260 41.9
Dinv42357 Davidia involucrata HOM05D008239 ORTHO05D009800 4.3e-38 162.5 264 37.9
Dinv21189 Davidia involucrata HOM05D008239 ORTHO05D009800 1.1e-36 157.9 255 38.8
Dinv23281 Davidia involucrata HOM05D008239 ORTHO05D009800 1.4e-36 157.5 261 36.0
Dinv12600 Davidia involucrata HOM05D008239 ORTHO05D009800 1.8e-36 157.1 255 39.2
Dinv30439 Davidia involucrata HOM05D008239 ORTHO05D009800 2.4e-36 156.8 268 34.3
Dinv25412 Davidia involucrata HOM05D008239 ORTHO05D009800 1.2e-35 154.5 260 38.1
Cc03_g02640 Coffea canephora HOM05D008239 ORTHO05D009800 5.0e-34 149.1 253 37.9
Dinv30487 Davidia involucrata HOM05D008239 ORTHO05D009800 4.6e-32 142.5 254 36.2
Dinv41180 Davidia involucrata HOM05D008239 ORTHO05D009800 4.6e-32 142.5 254 35.4
Dinv38088 Davidia involucrata HOM05D008239 ORTHO05D009800 1.0e-31 141.4 269 36.1
Rhsim06G0231700 Rhododendron simsii HOM05D008239 ORTHO05D009800 5.3e-28 129.0 205 38.5
Hma1.2p1_0120F.1_g057080 Hydrangea macrophylla HOM05D008239 ORTHO05D009800 7.2e-25 118.6 234 35.5
COL.COLO4_04045 Corchorus olitorius HOM05D008239 ORTHO05D009800 8.8e-23 111.7 234 33.3
COL.COLO4_17209 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.5e-22 110.9 260 32.3
Dinv25441 Davidia involucrata HOM05D008239 ORTHO05D009800 2.8e-21 106.7 199 35.2
Rhsim03G0008000 Rhododendron simsii HOM05D008239 ORTHO05D009800 6.3e-21 105.5 276 32.6
Dinv25440 Davidia involucrata HOM05D008239 ORTHO05D009800 8.2e-21 105.1 264 33.0
COL.COLO4_17217 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.1e-20 104.8 244 32.4
Dinv41765 Davidia involucrata HOM05D008239 ORTHO05D009800 5.0e-18 95.9 259 30.9
Dinv41766 Davidia involucrata HOM05D008239 ORTHO05D009800 6.5e-18 95.5 187 36.4
Dinv27633 Davidia involucrata HOM05D008239 ORTHO05D009800 4.2e-17 92.8 157 35.0
COL.COLO4_19868 Corchorus olitorius HOM05D008239 ORTHO05D009800 2.1e-16 90.5 268 25.0
Dinv04006 Davidia involucrata HOM05D008239 ORTHO05D009800 3.6e-16 89.7 126 41.3
Dinv25443 Davidia involucrata HOM05D008239 ORTHO05D009800 1.8e-15 87.4 251 26.7
COL.COLO4_19875 Corchorus olitorius HOM05D008239 ORTHO05D009800 8.8e-15 85.1 264 24.2
TAR622G0243 Trochodendron aralioides HOM05D007472 ORTHO05D009477 8.8e-15 85.1 153 36.6
AUR62037189 Chenopodium quinoa HOM05D025186 ORTHO05D009800 2.0e-14 84.0 197 28.9
DCAR_023499 Daucus carota HOM05D008239 ORTHO05D009800 2.6e-14 83.6 169 30.8
SEGI_07251 Sequoiadendron giganteum HOM05D007472 ORTHO05D009477 2.6e-14 83.6 209 27.8
Cc02_g10110 Coffea canephora HOM05D008239 ORTHO05D009800 3.3e-14 83.2 265 29.4
Rhsim06G0198100 Rhododendron simsii HOM05D008239 ORTHO05D009800 3.3e-14 83.2 248 30.6
vmacro22053 Vaccinium macrocarpon HOM05D008239 ORTHO05D009800 4.4e-14 82.8 248 29.0
COL.COLO4_12090 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.7e-13 80.9 135 38.5
COL.COLO4_16500 Corchorus olitorius HOM05D008239 ORTHO05D009800 4.8e-13 79.3 131 36.6
MBI14_g12118_MAGBIO Magnolia biondii HOM05D007472 ORTHO05D009477 6.3e-13 79.0 209 31.6
THA.LOC104805462 Tarenaya hassleriana HOM05D007472 ORTHO05D009477 6.3e-13 79.0 190 30.5
EL10Ac3g05534 Beta vulgaris HOM05D025186 ORTHO05D009800 2.4e-12 77.0 208 26.0
PGR142G1798 Punica granatum HOM05D007472 ORTHO05D009477 1.2e-11 74.7 237 29.5
Cc02_g10120 Coffea canephora HOM05D008239 ORTHO05D009800 1.6e-11 74.3 143 32.9
Potri.004G129100 Populus trichocarpa HOM05D007472 ORTHO05D009477 4.5e-11 72.8 163 33.1
TWI60G0556 Tripterygium wilfordii HOM05D007472 ORTHO05D009477 5.9e-11 72.4 251 27.9
Cfa007540 Carpinus fangiana HOM05D007472 ORTHO05D009477 7.7e-11 72.0 154 32.5
Cc02_g10150 Coffea canephora HOM05D008239 ORTHO05D009800 7.7e-11 72.0 143 30.1
Os10g0102200 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 1.0e-10 71.6 193 29.0
Aa31LG2G4320 Aethionema arabicum HOM05D007472 ORTHO05D009477 2.2e-10 70.5 186 29.6
CSS0022853 Camellia sinensis var. sinensis HOM05D008239 ORTHO05D009800 2.2e-10 70.5 109 42.2
Os05g0124600 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 2.9e-10 70.1 185 28.1
Haze_14546 Corylus avellana HOM05D007472 ORTHO05D009477 5.0e-10 69.3 197 27.4
Dinv21165 Davidia involucrata HOM05D008239 ORTHO05D009800 2.5e-09 67.0 90 38.9
Os07g0515900 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 2.5e-09 67.0 167 31.1
Rhsim03G0009800 Rhododendron simsii HOM05D008239 ORTHO05D009800 2.5e-09 67.0 123 35.0
Thecc.04G080300 Theobroma cacao HOM05D007472 ORTHO05D009477 2.5e-09 67.0 201 28.9
ATR0037G017 Amborella trichopoda HOM05D007472 ORTHO05D009477 4.2e-09 66.2 198 26.8
Manes.01G090001 Manihot esculenta HOM05D007472 ORTHO05D009477 4.2e-09 66.2 233 26.2
Os07g0515700 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 4.2e-09 66.2 167 31.7
AUR62039817 Chenopodium quinoa HOM05D007472 ORTHO05D009477 5.5e-09 65.9 204 28.9
COL.COLO4_12089 Corchorus olitorius HOM05D008239 ORTHO05D009800 5.5e-09 65.9 234 29.5
Os05g0124000 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 5.5e-09 65.9 226 25.7
Os01g0942900 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 7.2e-09 65.5 167 32.3
Prupe.3G268600 Prunus persica HOM05D007472 ORTHO05D009477 7.2e-09 65.5 192 29.7
Os01g0943800 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 1.2e-08 64.7 167 32.3
AUR62020016 Chenopodium quinoa HOM05D023548 ORTHO05D009800 2.1e-08 63.9 228 28.1
Os12g0572800 Oryza sativa ssp. japonica HOM05D007472 ORTHO05D009477 2.1e-08 63.9 194 32.5
Aqoxy1G01920 Aquilegia oxysepala HOM05D007472 ORTHO05D009477 2.7e-08 63.5 195 28.2
FAN02G3469 Fragaria x ananassa HOM05D007472 ORTHO05D009477 4.7e-08 62.8 154 28.6
AUR62013258 Chenopodium quinoa HOM05D023548 ORTHO05D009800 6.1e-08 62.4 228 27.6
COL.COLO4_24278 Corchorus olitorius HOM05D008239 ORTHO05D009800 6.1e-08 62.4 201 29.4
MD09G1050300 Malus domestica HOM05D007472 ORTHO05D009477 1.0e-07 61.6 207 27.1
AUR62030492 Chenopodium quinoa HOM05D025186 ORTHO05D009800 1.4e-07 61.2 191 25.1
COL.COLO4_17213 Corchorus olitorius HOM05D008239 ORTHO05D009800 2.3e-07 60.5 132 30.3
SHI06832 Sapria himalayana HOM05D007472 ORTHO05D000001 3.0e-07 60.1 221 26.2
CSS0028968 Camellia sinensis var. sinensis HOM05D008239 ORTHO05D009800 4.0e-07 59.7 100 41.0
EL10Ac2g02974 Beta vulgaris HOM05D007472 ORTHO05D009477 8.8e-07 58.5 221 27.1
QL04p014554 Quercus lobata HOM05D007472 ORTHO05D009477 4.4e-06 56.2 156 30.8
QL04p014916 Quercus lobata HOM05D007472 ORTHO05D009477 4.4e-06 56.2 156 30.8


User provided reference genes

Program Settings