Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42339 Davidia involucrata HOM05D004042 ORTHO05D004552 6.0e-280 966.8 486 100.0
Cfa003057 Carpinus fangiana HOM05D004042 ORTHO05D004552 3.5e-211 738.4 532 71.1
Haze_25938 Corylus avellana HOM05D004042 ORTHO05D004552 1.0e-210 736.9 539 71.1
TAR624G0704 Trochodendron aralioides HOM05D004042 ORTHO05D004552 1.6e-208 729.6 535 69.9
Prupe.7G206100 Prunus persica HOM05D004042 ORTHO05D004552 2.8e-208 728.8 535 70.5
Migut.J00573 Erythranthe guttata HOM05D004042 ORTHO05D004552 3.6e-208 728.4 547 69.1
Oeu051295.1 Olea europaea HOM05D004042 ORTHO05D004552 2.3e-207 725.7 536 72.0
Oeu054835.1 Olea europaea HOM05D004042 ORTHO05D004552 1.2e-206 723.4 536 71.8
CiPaw.03G212500 Carya illinoinensis HOM05D004042 ORTHO05D004552 2.0e-206 722.6 537 69.6
GSVIVG01015174001 Vitis vinifera HOM05D004042 ORTHO05D004552 1.3e-205 719.9 451 77.2
MSTRG.19492 Avicennia marina HOM05D004042 ORTHO05D004552 2.2e-205 719.2 540 68.0
Actinidia25240 Actinidia chinensis HOM05D004042 ORTHO05D004552 4.9e-205 718.0 504 74.8
Ciclev10008048m.g Citrus clementina HOM05D004042 ORTHO05D004552 1.1e-204 716.8 509 72.3
Thecc.09G085400 Theobroma cacao HOM05D004042 ORTHO05D004552 1.6e-203 713.0 513 72.5
Glyma.13G106100 Glycine max HOM05D004042 ORTHO05D004552 3.5e-203 711.8 503 72.0
MD02G1082600 Malus domestica HOM05D004042 ORTHO05D004552 1.0e-202 710.3 531 68.7
MD15G1210700 Malus domestica HOM05D004042 ORTHO05D004552 5.1e-202 708.0 528 69.9
Lj4g0002498 Lotus japonicus HOM05D004042 ORTHO05D004552 6.6e-202 707.6 510 71.4
Glyma.17G053300 Glycine max HOM05D004042 ORTHO05D004552 8.6e-202 707.2 512 69.9
CiPaw.04G147900 Carya illinoinensis HOM05D004042 ORTHO05D004552 1.5e-201 706.4 523 69.6
QL02p062121 Quercus lobata HOM05D004042 ORTHO05D004552 2.5e-201 705.7 555 67.2
Cc06_g11620 Coffea canephora HOM05D004042 ORTHO05D004552 5.6e-201 704.5 395 85.1
Atru.chr7.1627 Acer truncatum HOM05D004042 ORTHO05D004552 1.6e-200 703.0 495 71.5
Psat1g132200 Pisum sativum HOM05D004042 ORTHO05D004552 2.2e-197 692.6 523 67.5
Nn6g35535 Nelumbo nucifera HOM05D004042 ORTHO05D004552 2.9e-197 692.2 527 67.0
Psat7g044040 Pisum sativum HOM05D004042 ORTHO05D004552 4.9e-197 691.4 395 82.3
MELO3C004632.2 Cucumis melo HOM05D004042 ORTHO05D004552 6.4e-197 691.0 395 82.8
PGR142G2341 Punica granatum HOM05D004042 ORTHO05D004552 8.4e-197 690.6 541 66.2
CsaV3_2G001380 Cucumis sativus L. HOM05D004042 ORTHO05D004552 1.9e-196 689.5 395 82.8
Sc08g0008580 Simmondsia chinensis HOM05D004042 ORTHO05D004552 2.4e-196 689.1 503 69.8
TPR.G9438 Trifolium pratense HOM05D004042 ORTHO05D004552 3.2e-196 688.7 507 68.4
VMungo1215G0315 Vigna mungo HOM05D004042 ORTHO05D004552 4.1e-196 688.3 509 68.6
TPR.G29533 Trifolium pratense HOM05D004042 ORTHO05D004552 1.6e-195 686.4 526 66.5
Sed0015499 Sechium edule HOM05D004042 ORTHO05D004552 1.0e-194 683.7 539 65.9
Lj7C679G4 Lonicera japonica HOM05D004042 ORTHO05D004552 1.3e-194 683.3 495 73.9
PSO063G3240 Papaver somniferum HOM05D004042 ORTHO05D004552 1.7e-194 682.9 396 81.8
Phvul.003G134900 Phaseolus vulgaris HOM05D004042 ORTHO05D004552 3.9e-194 681.8 487 70.6
DCAR_028272 Daucus carota HOM05D004042 ORTHO05D004552 1.1e-193 680.2 486 71.2
Potri.018G066100 Populus trichocarpa HOM05D004042 ORTHO05D004552 1.1e-193 680.2 490 70.4
vmacro17139 Vaccinium macrocarpon HOM05D004042 ORTHO05D004552 1.1e-193 680.2 639 59.8
CANSAT56G0725 Cannabis sativa HOM05D004042 ORTHO05D004552 2.5e-193 679.1 545 65.7
Dinv36786 Davidia involucrata HOM05D004042 ORTHO05D004552 3.3e-193 678.7 453 77.9
Medtr4g125980 Medicago truncatula HOM05D004042 ORTHO05D004552 3.3e-193 678.7 394 81.0
TWI32G1194 Tripterygium wilfordii HOM05D004042 ORTHO05D004552 4.3e-193 678.3 520 68.8
Lalb_Chr08g0232371 Lupinus albus HOM05D004042 ORTHO05D004552 5.6e-193 677.9 395 81.0
Medtr2g039940 Medicago truncatula HOM05D004042 ORTHO05D004552 9.6e-193 677.2 396 81.6
Lj6g0011849 Lotus japonicus HOM05D004042 ORTHO05D004552 1.6e-192 676.4 519 66.5
Aqoxy7G01162 Aquilegia oxysepala HOM05D004042 ORTHO05D004552 2.8e-192 675.6 533 65.1
HanXRQChr12g0354671 Helianthus annuus HOM05D004042 ORTHO05D004552 3.6e-192 675.2 396 80.6
ECA234G2403 Erigeron canadensis HOM05D004042 ORTHO05D004552 6.2e-192 674.5 396 80.6
ClCG11G001680 Citrullus lanatus HOM05D004042 ORTHO05D004552 1.4e-191 673.3 530 66.0
Glyma.09G065300 Glycine max HOM05D004042 ORTHO05D004552 1.8e-191 672.9 513 66.7
CAN.G57.12 Capsicum annuum HOM05D004042 ORTHO05D004552 3.1e-191 672.2 524 65.8
ATR0789G051 Amborella trichopoda HOM05D004042 ORTHO05D004552 4.0e-191 671.8 395 79.0
HanXRQChr10g0319461 Helianthus annuus HOM05D004042 ORTHO05D004552 4.0e-191 671.8 396 79.3
Gorai.001G013100 Gossypium raimondii HOM05D004042 ORTHO05D004552 6.9e-191 671.0 509 67.4
PSO832G2139 Papaver somniferum HOM05D004042 ORTHO05D004552 8.9e-191 670.6 460 72.8
Gohir.D07G012400 Gossypium hirsutum HOM05D004042 ORTHO05D004552 1.2e-190 670.2 509 67.4
CDE05G1317 Ceratophyllum demersum HOM05D004042 ORTHO05D004552 2.6e-190 669.1 396 77.5
Phvul.009G230700 Phaseolus vulgaris HOM05D004042 ORTHO05D004552 2.6e-190 669.1 515 66.4
Sopen07g019480 Solanum pennellii HOM05D004042 ORTHO05D004552 2.6e-190 669.1 514 66.9
Solyc07g040740.3 Solanum lycopersicum HOM05D004042 ORTHO05D004552 3.4e-190 668.7 514 66.9
PGSC0003DMG400000274 Solanum tuberosum HOM05D004042 ORTHO05D004552 1.3e-189 666.8 394 79.7
Sopen12g003900 Solanum pennellii HOM05D004042 ORTHO05D004552 1.7e-189 666.4 395 79.2
RcHm_v2.0_Chr2g0093781 Rosa chinensis HOM05D004042 ORTHO05D004552 3.8e-189 665.2 521 67.0
Solyc12g008970.3 Solanum lycopersicum HOM05D004042 ORTHO05D004552 6.4e-189 664.5 394 79.2
Gohir.A07G012600 Gossypium hirsutum HOM05D004042 ORTHO05D004552 3.2e-188 662.1 509 66.8
Manes.16G100000 Manihot esculenta HOM05D004042 ORTHO05D004552 5.4e-188 661.4 395 79.7
FvH4_1g07910 Fragaria vesca HOM05D004042 ORTHO05D004552 7.8e-187 657.5 484 69.8
HanXRQChr03g0060291 Helianthus annuus HOM05D004042 ORTHO05D004552 7.8e-187 657.5 473 69.8
Lalb_Chr13g0299591 Lupinus albus HOM05D004042 ORTHO05D004552 1.0e-186 657.1 483 68.7
TWI63G1034 Tripterygium wilfordii HOM05D004042 ORTHO05D004552 2.3e-186 656.0 492 70.7
THA.LOC104814629 Tarenaya hassleriana HOM05D004042 ORTHO05D004552 3.9e-186 655.2 395 79.7
Duzib168G0739 Durio zibethinus HOM05D004042 ORTHO05D004552 9.6e-185 650.6 505 67.1
HPP92_005224 Vanilla planifolia HOM05D004042 ORTHO05D004552 1.1e-183 647.1 397 76.1
Nitab4.5_0009216g0010 Nicotiana tabacum HOM05D004042 ORTHO05D004552 1.8e-183 646.4 592 60.3
PSO210G1704 Papaver somniferum HOM05D004042 ORTHO05D004552 2.0e-182 642.9 397 78.8
AT2G19450 Arabidopsis thaliana HOM05D004042 ORTHO05D004552 2.6e-182 642.5 395 78.0
PSO210G6497 Papaver somniferum HOM05D004042 ORTHO05D004552 1.3e-181 640.2 397 78.3
Os06g0563900 Oryza sativa ssp. japonica HOM05D004042 ORTHO05D004552 1.4e-180 636.7 395 77.0
AL3G48800 Arabidopsis lyrata HOM05D004042 ORTHO05D004552 1.9e-180 636.3 514 64.8
Peaxi162Scf00498g00448 Petunia axillaris HOM05D004042 ORTHO05D004552 3.2e-180 635.6 397 77.8
FAN28G1686 Fragaria x ananassa HOM05D004042 ORTHO05D004552 9.3e-180 634.0 395 78.0
Carub.0003s3373 Capsella rubella HOM05D004042 ORTHO05D004552 1.6e-179 633.3 522 64.2
BcaB07g31608 Brassica carinata HOM05D004042 ORTHO05D004552 6.0e-179 631.3 395 77.7
C07p02710 Brassica napus HOM05D004042 ORTHO05D004552 7.9e-179 630.9 509 63.7
BolC7t40671H Brassica oleracea HOM05D004042 ORTHO05D004552 7.9e-179 630.9 509 63.7
BcaC06g36576 Brassica carinata HOM05D004042 ORTHO05D004552 1.0e-178 630.6 482 66.6
A07p01320 Brassica napus HOM05D004042 ORTHO05D004552 1.3e-178 630.2 508 64.8
BraA07t27923Z Brassica rapa HOM05D004042 ORTHO05D004552 1.3e-178 630.2 508 64.8
FAN26G3195 Fragaria x ananassa HOM05D004042 ORTHO05D004552 1.3e-178 630.2 453 70.0
Sp3g32820 Schrenkiella parvula HOM05D004042 ORTHO05D004552 1.8e-178 629.8 524 63.0
A09p12360 Brassica napus HOM05D004042 ORTHO05D004552 2.3e-178 629.4 395 76.5
C09p14580 Brassica napus HOM05D004042 ORTHO05D004552 2.3e-178 629.4 395 76.5
BraA09t36880Z Brassica rapa HOM05D004042 ORTHO05D004552 2.3e-178 629.4 395 76.5
CARHR109890 Cardamine hirsuta HOM05D004042 ORTHO05D004552 3.9e-178 628.6 527 64.1
Thhalv10022645m.g Eutrema salsugineum HOM05D004042 ORTHO05D004552 1.1e-177 627.1 523 62.7
FAN26G0253 Fragaria x ananassa HOM05D004042 ORTHO05D004552 2.5e-177 625.9 453 69.5
BcaB03g16730 Brassica carinata HOM05D004042 ORTHO05D004552 9.6e-177 624.0 516 62.8
FAN19G1831 Fragaria x ananassa HOM05D004042 ORTHO05D004552 9.6e-177 624.0 406 76.1
BcaC04g22852 Brassica carinata HOM05D004042 ORTHO05D004552 1.3e-176 623.6 463 68.0
BolC9t54364H Brassica oleracea HOM05D004042 ORTHO05D004552 1.3e-176 623.6 463 68.0
Zm00001eb277490 Zea mays HOM05D004042 ORTHO05D004552 1.6e-176 623.2 395 73.9
FAN23G0463 Fragaria x ananassa HOM05D004042 ORTHO05D004552 2.4e-175 619.4 395 78.0
SGA_v2.0_scaffold91G28060 Striga asiatica HOM05D004042 ORTHO05D004552 4.0e-175 618.6 539 63.5
CAN.G1583.6 Capsicum annuum HOM05D004042 ORTHO05D004552 9.0e-175 617.5 368 77.4
arahy.Tifrunner.gnm1.ann1.MYU01D Arachis hypogaea HOM05D004042 ORTHO05D004552 1.5e-174 616.7 461 67.7
Potri.006G147600 Populus trichocarpa HOM05D004042 ORTHO05D004552 2.0e-174 616.3 467 67.7
Rhsim05G0016600 Rhododendron simsii HOM05D004042 ORTHO05D004552 2.4e-172 609.4 630 58.3
unitig_8.g4318 Utricularia gibba HOM05D004042 ORTHO05D004552 1.5e-169 600.1 397 73.3
TAR636G2477 Trochodendron aralioides HOM05D004042 ORTHO05D004552 2.5e-169 599.4 464 67.7
Lsat_1_v5_gn_5_143061 Lactuca sativa HOM05D004042 ORTHO05D004552 3.3e-169 599.0 527 62.6
Aa31LG8G16450 Aethionema arabicum HOM05D004042 ORTHO05D004552 1.1e-167 594.0 399 73.7
Os05g0196800 Oryza sativa ssp. japonica HOM05D004042 ORTHO05D004552 4.0e-167 592.0 394 70.3
arahy.Tifrunner.gnm1.ann1.MZM9C8 Arachis hypogaea HOM05D004042 ORTHO05D004552 5.5e-164 581.6 473 64.1
Oeu032802.1 Olea europaea HOM05D004042 ORTHO05D004552 2.5e-161 572.8 405 72.8
SalBow6G0873 Salvia bowleyana HOM05D004042 ORTHO05D004552 4.3e-161 572.0 550 60.2
DCAR_011961 Daucus carota HOM05D004042 ORTHO05D004552 2.8e-160 569.3 368 74.7
Mapoly0012s0121 Marchantia polymorpha HOM05D004042 ORTHO05D004552 2.0e-158 563.1 396 65.4
Nitab4.5_0001519g0080 Nicotiana tabacum HOM05D004042 ORTHO05D004552 1.0e-157 560.8 560 58.4
Eucgr.C03419 Eucalyptus grandis HOM05D004042 ORTHO05D004552 3.6e-155 552.4 326 80.7
Nitab4.5_0002824g0090 Nicotiana tabacum HOM05D004042 ORTHO05D004552 5.1e-154 548.5 364 74.5
Pp3c15_23830 Physcomitrium patens HOM05D004042 ORTHO05D004552 5.1e-154 548.5 402 64.4
HPP92_003981 Vanilla planifolia HOM05D004042 ORTHO05D004552 1.9e-153 546.6 367 70.3
AagrBONN_evm.TU.Sc2ySwM_117.1233 Anthoceros agrestis HOM05D004042 ORTHO05D004552 1.3e-152 543.9 394 64.7
SMO356G0470 Selaginella moellendorffii HOM05D004042 ORTHO05D004552 8.2e-152 541.2 399 64.9
arahy.Tifrunner.gnm1.ann1.W5L64F Arachis hypogaea HOM05D004042 ORTHO05D004552 1.1e-151 540.8 394 67.3
Lalb_Chr11g0074521 Lupinus albus HOM05D004042 ORTHO05D004552 1.4e-151 540.4 362 74.3
CSS0045629 Camellia sinensis var. sinensis HOM05D004042 ORTHO05D004552 5.9e-150 535.0 530 58.9
AagrBONN_evm.TU.Sc2ySwM_344.3248 Anthoceros agrestis HOM05D004042 ORTHO05D004552 7.7e-150 534.6 396 62.9
EL10Ac8g19178 Beta vulgaris HOM05D004042 ORTHO05D004552 3.8e-149 532.3 525 56.8
Ca_13125_v3 Cicer arietinum L. HOM05D004042 ORTHO05D004552 1.4e-146 523.9 456 61.6
arahy.Tifrunner.gnm1.ann1.5W0QMQ Arachis hypogaea HOM05D004042 ORTHO05D004552 2.3e-146 523.1 383 66.8
Nitab4.5_0002642g0100 Nicotiana tabacum HOM05D004042 ORTHO05D004552 2.2e-141 506.5 339 73.7
Manes.03G036000 Manihot esculenta HOM05D004042 ORTHO05D004552 1.9e-140 503.4 485 58.8
Sabra18G0058600 Salix brachista HOM05D004042 ORTHO05D004552 1.8e-138 496.9 384 67.7
Ca_21290_v3 Cicer arietinum L. HOM05D004042 ORTHO05D004552 2.8e-136 489.6 396 66.4
Pp3c9_24440 Physcomitrium patens HOM05D004042 ORTHO05D004552 6.3e-136 488.4 375 62.7
Peaxi162Scf00494g00077 Petunia axillaris HOM05D004042 ORTHO05D004552 5.3e-135 485.3 420 62.6
Zm00001eb284200 Zea mays HOM05D004042 ORTHO05D004552 1.2e-134 484.2 329 71.1
Sabra06G0116600 Salix brachista HOM05D004042 ORTHO05D004552 3.8e-133 479.2 391 65.0
Hund25994 Selenicereus undatus HOM05D004042 ORTHO05D004552 2.3e-130 469.9 289 77.5
AUR62029034 Chenopodium quinoa HOM05D004042 ORTHO05D004552 2.0e-129 466.8 282 79.8
Hund06663 Selenicereus undatus HOM05D004042 ORTHO05D004552 4.7e-123 445.7 482 53.1
CDE05G1467 Ceratophyllum demersum HOM05D004042 ORTHO05D004552 2.3e-114 416.8 265 74.7
AagrBONN_evm.TU.Sc2ySwM_344.1721 Anthoceros agrestis HOM05D004042 ORTHO05D004552 2.2e-112 410.2 326 60.7
VMungo1309G0638 Vigna mungo HOM05D004042 ORTHO05D004552 1.8e-111 407.1 374 60.2
Hma1.2p1_0672F.1_g201026 Hydrangea macrophylla HOM05D004042 ORTHO05D004552 6.1e-107 392.1 210 87.1
Sc18g0002260 Simmondsia chinensis HOM05D004042 ORTHO05D004552 8.0e-107 391.7 255 75.3
PRCOL_00002371 Prasinoderma coloniale HOM05D004042 ORTHO05D004552 1.1e-92 344.7 410 44.9
Cpa.g.sc737.2 Carica papaya HOM05D004042 ORTHO05D004552 3.4e-73 280.0 144 87.5
Hma1.2p1_0672F.1_g201023 Hydrangea macrophylla HOM05D004042 ORTHO05D004552 4.2e-71 273.1 155 84.5
PGSC0003DMG400032788 Solanum tuberosum HOM05D004042 ORTHO05D004552 1.1e-66 258.5 177 73.4
AUR62033935 Chenopodium quinoa HOM05D004042 ORTHO05D004552 3.4e-65 253.4 293 52.6
Lj4C291G3 Lonicera japonica HOM05D004042 ORTHO05D004552 5.8e-65 252.7 324 50.0
SMO361G0462 Selaginella moellendorffii HOM05D004042 ORTHO05D004552 9.9e-65 251.9 197 58.9
COL.COLO4_18176 Corchorus olitorius HOM05D004042 ORTHO05D004552 3.0e-61 240.4 251 57.8
FAN28G2747 Fragaria x ananassa HOM05D004042 ORTHO05D004552 6.7e-61 239.2 142 79.6
Haze_27058 Corylus avellana HOM05D004042 ORTHO05D004552 1.1e-60 238.4 396 35.6
Cre01.g045903 Chlamydomonas reinhardtii HOM05D004042 ORTHO05D004552 1.1e-58 231.9 160 62.5
Cfa021676 Carpinus fangiana HOM05D004042 ORTHO05D004552 3.3e-52 210.3 438 34.0
PGSC0003DMG400032789 Solanum tuberosum HOM05D004042 ORTHO05D004552 2.3e-45 187.6 101 82.2
Cpa.g.sc737.3 Carica papaya HOM05D004042 ORTHO05D004552 2.4e-42 177.6 237 51.5
Cfa025900 Carpinus fangiana HOM05D004042 ORTHO05D123407 4.4e-20 103.6 197 34.0
Peaxi162Scf00126g01028 Petunia axillaris HOM05D004042 ORTHO05D004552 6.3e-19 99.8 49 87.8
Cfa024924 Carpinus fangiana HOM05D004042 ORTHO05D004552 2.4e-18 97.8 252 30.2
Glyma.15G171700 Glycine max HOM05D004042 ORTHO05D004552 3.8e-16 90.5 51 78.4
Lalb_Chr11g0074531 Lupinus albus HOM05D004042 ORTHO05D004552 7.2e-15 86.3 48 77.1
SEGI_28032 Sequoiadendron giganteum HOM05D004042 ORTHO05D004552 4.0e-13 80.5 63 57.1
Sabra18G0058500 Salix brachista HOM05D004042 ORTHO05D004552 4.8e-11 73.6 106 42.5
AUR62029035 Chenopodium quinoa HOM05D004042 ORTHO05D004552 1.6e-09 68.6 39 79.5
PSO339G6631 Papaver somniferum HOM05D002947 ORTHO05D037275 1.0e-08 65.9 42 76.2
PSO266G0038 Papaver somniferum HOM05D002947 ORTHO05D037275 6.5e-08 63.2 78 51.3
PSO765G0232 Papaver somniferum HOM05D004042 ORTHO05D004552 2.5e-07 61.2 100 43.0


User provided reference genes

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