Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42307 Davidia involucrata HOM05D007800 ORTHO05D009881 9.8e-74 280.0 140 100.0
Dinv36755 Davidia involucrata HOM05D007800 ORTHO05D009881 1.7e-41 172.9 118 77.1
CSS0040388 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 2.9e-41 172.2 117 73.5
CSS0047448 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 2.9e-41 172.2 117 73.5
GSVIVG01015219001 Vitis vinifera HOM05D007800 ORTHO05D009881 2.3e-38 162.5 113 71.7
Lj7P673T61 Lonicera japonica HOM05D007800 ORTHO05D009881 1.5e-37 159.8 112 72.3
Actinidia03799 Actinidia chinensis HOM05D007800 ORTHO05D009881 2.5e-37 159.1 117 66.7
Nn8g38899 Nelumbo nucifera HOM05D007800 ORTHO05D009881 1.6e-36 156.4 125 67.2
Cpa.g.sc93.18 Carica papaya HOM05D007800 ORTHO05D009881 4.8e-36 154.8 113 69.0
MD02G1076500 Malus domestica HOM05D007800 ORTHO05D009881 8.1e-36 154.1 117 65.0
TWI32G0422 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 8.1e-36 154.1 115 66.1
TWI32G0405 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 5.3e-35 151.4 117 63.2
Prupe.7G211900 Prunus persica HOM05D007800 ORTHO05D009881 9.0e-35 150.6 116 64.7
Hma1.2p1_0800F.1_g220040 Hydrangea macrophylla HOM05D007800 ORTHO05D009881 3.4e-34 148.7 117 68.4
Cfa003104 Carpinus fangiana HOM05D007800 ORTHO05D009881 5.8e-34 147.9 117 64.1
CiPaw.03G217600 Carya illinoinensis HOM05D007800 ORTHO05D009881 5.8e-34 147.9 115 64.3
Duzib150G1500 Durio zibethinus HOM05D007800 ORTHO05D009881 7.6e-34 147.5 117 63.2
RcHm_v2.0_Chr2g0093101 Rosa chinensis HOM05D007800 ORTHO05D009881 7.6e-34 147.5 117 61.5
Cc06_g11240 Coffea canephora HOM05D007800 ORTHO05D009881 1.3e-33 146.7 117 63.2
FAN26G3078 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.3e-33 146.7 117 61.5
FvH4_1g07200 Fragaria vesca HOM05D007800 ORTHO05D009881 1.7e-33 146.4 117 60.7
FAN26G1329 Fragaria x ananassa HOM05D007800 ORTHO05D009881 2.2e-33 146.0 117 61.5
Atru.BG.11.p Acer truncatum HOM05D007800 ORTHO05D009881 2.9e-33 145.6 117 64.1
COL.COLO4_18216 Corchorus olitorius HOM05D007800 ORTHO05D009881 4.9e-33 144.8 117 63.2
FAN23G2336 Fragaria x ananassa HOM05D007800 ORTHO05D009881 6.4e-33 144.4 117 59.8
QL02p062921 Quercus lobata HOM05D007800 ORTHO05D009881 6.4e-33 144.4 117 64.1
FAN28G0657 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.4e-32 143.3 117 59.8
TAR626G0221 Trochodendron aralioides HOM05D007800 ORTHO05D009881 1.4e-32 143.3 119 63.0
Thecc.09G091400 Theobroma cacao HOM05D007800 ORTHO05D009881 1.9e-32 142.9 117 59.8
Ciclev10010231m.g Citrus clementina HOM05D007800 ORTHO05D009881 3.2e-32 142.1 113 63.7
Haze_25896 Corylus avellana HOM05D007800 ORTHO05D009881 3.2e-32 142.1 117 63.2
FAN19G0334 Fragaria x ananassa HOM05D007800 ORTHO05D009881 3.2e-32 142.1 117 59.0
Manes.16G103100 Manihot esculenta HOM05D007800 ORTHO05D009881 9.3e-32 140.6 114 62.3
PGSC0003DMG400002319 Solanum tuberosum HOM05D007800 ORTHO05D009881 2.1e-31 139.4 116 56.0
Solyc07g026640.3 Solanum lycopersicum HOM05D007800 ORTHO05D009881 4.6e-31 138.3 116 57.8
Sopen07g014250 Solanum pennellii HOM05D007800 ORTHO05D009881 4.6e-31 138.3 116 57.8
DCAR_010680 Daucus carota HOM05D007800 ORTHO05D009881 7.9e-31 137.5 117 61.5
Gohir.A06G071700 Gossypium hirsutum HOM05D007800 ORTHO05D009881 3.9e-30 135.2 117 57.3
Gohir.D06G070300 Gossypium hirsutum HOM05D007800 ORTHO05D009881 6.7e-30 134.4 128 54.7
AT4G29560 Arabidopsis thaliana HOM05D007800 ORTHO05D009881 4.3e-29 131.7 127 55.9
CANSAT56G2700 Cannabis sativa HOM05D007800 ORTHO05D009881 7.4e-29 131.0 112 60.7
Nitab4.5_0010434g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 7.4e-29 131.0 117 53.8
Gorai.010G081900 Gossypium raimondii HOM05D007800 ORTHO05D009881 1.3e-28 130.2 117 55.6
Sabra06G0120000 Salix brachista HOM05D007800 ORTHO05D009881 1.6e-28 129.8 114 60.5
Eucgr.C00905 Eucalyptus grandis HOM05D007800 ORTHO05D009881 2.1e-28 129.4 117 57.3
Potri.006G151500 Populus trichocarpa HOM05D007800 ORTHO05D009881 6.2e-28 127.9 115 58.3
Nitab4.5_0010222g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 2.4e-27 125.9 117 53.0
Oeu018234.1 Olea europaea HOM05D007800 ORTHO05D009881 2.4e-27 125.9 118 54.2
PSO832G3388 Papaver somniferum HOM05D007800 ORTHO05D009881 3.1e-27 125.6 119 60.5
MSTRG.19524 Avicennia marina HOM05D007800 ORTHO05D009881 4.0e-27 125.2 118 55.9
AL7G22820 Arabidopsis lyrata HOM05D007800 ORTHO05D009881 5.3e-27 124.8 127 52.8
SalBow1G2412 Salvia bowleyana HOM05D007800 ORTHO05D009881 5.3e-27 124.8 116 55.2
Lsat_1_v5_gn_7_37520 Lactuca sativa HOM05D007800 ORTHO05D009881 9.0e-27 124.0 117 52.1
PSO063G3968 Papaver somniferum HOM05D007800 ORTHO05D009881 1.2e-26 123.6 122 58.2
CARHR237380 Cardamine hirsuta HOM05D007800 ORTHO05D009881 2.0e-26 122.9 127 52.8
Peaxi162Scf00141g00327 Petunia axillaris HOM05D007800 ORTHO05D009881 3.4e-26 122.1 110 53.6
Thhalv10027131m.g Eutrema salsugineum HOM05D007800 ORTHO05D009881 5.8e-26 121.3 128 49.2
BcaB03g12612 Brassica carinata HOM05D007800 ORTHO05D009881 2.9e-25 119.0 127 49.6
PGR142G2964 Punica granatum HOM05D007800 ORTHO05D009881 2.4e-24 115.9 119 52.1
A08p19590 Brassica napus HOM05D007800 ORTHO05D009881 3.2e-24 115.5 127 47.2
ECA240G1450 Erigeron canadensis HOM05D007800 ORTHO05D009881 4.2e-24 115.2 118 53.4
C03p89220 Brassica napus HOM05D007800 ORTHO05D009881 9.3e-24 114.0 127 45.7
BolC3t21231H Brassica oleracea HOM05D007800 ORTHO05D009881 9.3e-24 114.0 127 45.7
BcaC01g01177 Brassica carinata HOM05D007800 ORTHO05D009881 1.2e-23 113.6 114 50.0
THA.LOC104801881 Tarenaya hassleriana HOM05D007800 ORTHO05D009881 1.6e-23 113.2 128 48.4
BraA08t33918Z Brassica rapa HOM05D007800 ORTHO05D009881 2.7e-23 112.5 127 46.5
Aqoxy7G01245 Aquilegia oxysepala HOM05D007800 ORTHO05D009881 3.5e-23 112.1 127 48.0
Carub.0007s1100 Capsella rubella HOM05D007800 ORTHO05D009881 3.5e-23 112.1 128 49.2
MBI01_g01250_MAGBIO Magnolia biondii HOM05D007800 ORTHO05D009881 4.6e-23 111.7 113 54.0
SGA_v2.0_scaffold23G09996 Striga asiatica HOM05D007800 ORTHO05D009881 1.0e-22 110.5 117 49.6
HanXRQChr03g0060771 Helianthus annuus HOM05D007800 ORTHO05D009881 6.7e-22 107.8 118 50.8
MD15G1205200 Malus domestica HOM05D007800 ORTHO05D009881 1.9e-21 106.3 90 58.9
Migut.K00591 Erythranthe guttata HOM05D007800 ORTHO05D009881 3.3e-21 105.5 118 50.0
HPP92_005239 Vanilla planifolia HOM05D007800 ORTHO05D009881 1.1e-19 100.5 126 42.1
Sc08g0008380 Simmondsia chinensis HOM05D007800 ORTHO05D009881 1.8e-19 99.8 114 51.8
ATR0782G161 Amborella trichopoda HOM05D007800 ORTHO05D009881 1.3e-17 93.6 117 43.6
SEGI_31551 Sequoiadendron giganteum HOM05D007800 ORTHO05D009881 4.3e-13 78.6 100 46.0
Os06g0573800 Oryza sativa ssp. japonica HOM05D007800 ORTHO05D009881 4.8e-12 75.1 116 37.1
Zm00001eb385220 Zea mays HOM05D007800 ORTHO05D009881 2.6e-10 69.3 116 36.2
Pp3c4_16520 Physcomitrium patens HOM05D007800 ORTHO05D009881 8.5e-09 64.3 96 34.4
Mapoly0036s0155 Marchantia polymorpha HOM05D007800 ORTHO05D009881 2.3e-06 56.2 93 31.2


User provided reference genes

Program Settings