Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42286 Davidia involucrata HOM05D006529 ORTHO05D008380 4.6e-120 434.5 209 100.0
Dinv36729 Davidia involucrata HOM05D006529 ORTHO05D008380 1.2e-88 330.1 205 81.0
Cfa003138 Carpinus fangiana HOM05D006529 ORTHO05D008380 4.8e-85 318.2 206 73.3
CSS0016193 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 8.3e-85 317.4 207 72.0
Lj7C671T1 Lonicera japonica HOM05D006529 ORTHO05D008380 7.7e-83 310.8 209 71.3
Atru.chr7.1518 Acer truncatum HOM05D006529 ORTHO05D008380 1.3e-82 310.1 210 72.4
TAR624G0297 Trochodendron aralioides HOM05D006529 ORTHO05D008380 1.9e-81 306.2 212 70.3
CiPaw.04G153200 Carya illinoinensis HOM05D006529 ORTHO05D008380 1.6e-80 303.1 206 69.9
vmacro06269 Vaccinium macrocarpon HOM05D006529 ORTHO05D008380 4.7e-80 301.6 210 70.0
Nitab4.5_0004011g0030 Nicotiana tabacum HOM05D006529 ORTHO05D008380 1.4e-79 300.1 208 70.2
GSVIVG01015253001 Vitis vinifera HOM05D006529 ORTHO05D008380 1.5e-78 296.6 206 72.3
Actinidia29893 Actinidia chinensis HOM05D006529 ORTHO05D008380 3.4e-78 295.4 222 68.5
Ciclev10009577m.g Citrus clementina HOM05D006529 ORTHO05D008380 7.5e-78 294.3 205 70.2
Eucgr.C00932 Eucalyptus grandis HOM05D006529 ORTHO05D008380 1.7e-77 293.1 211 66.8
Nn8g38953 Nelumbo nucifera HOM05D006529 ORTHO05D008380 2.8e-77 292.4 214 68.2
ECA240G3812 Erigeron canadensis HOM05D006529 ORTHO05D008380 3.7e-77 292.0 212 65.6
RcHm_v2.0_Chr2g0092481 Rosa chinensis HOM05D006529 ORTHO05D008380 3.7e-77 292.0 205 68.8
Cc06_g10920 Coffea canephora HOM05D006529 ORTHO05D008380 4.1e-76 288.5 206 68.9
Duzib150G0994 Durio zibethinus HOM05D006529 ORTHO05D008380 9.2e-76 287.3 200 67.5
Prupe.7G215100 Prunus persica HOM05D006529 ORTHO05D008380 9.2e-76 287.3 208 68.8
FAN23G2505 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.2e-75 287.0 206 66.5
FvH4_1g06740 Fragaria vesca HOM05D006529 ORTHO05D008380 2.0e-75 286.2 206 66.5
FAN19G1593 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.0e-75 286.2 206 66.5
PGR142G1231 Punica granatum HOM05D006529 ORTHO05D008380 4.5e-75 285.0 213 65.3
Nn6g35394 Nelumbo nucifera HOM05D006529 ORTHO05D008380 5.9e-75 284.6 211 65.4
QL02p063543 Quercus lobata HOM05D006529 ORTHO05D008380 5.9e-75 284.6 246 58.1
MD02G1072300 Malus domestica HOM05D006529 ORTHO05D008380 2.3e-74 282.7 211 65.9
DCAR_012008 Daucus carota HOM05D006529 ORTHO05D008380 6.6e-74 281.2 212 64.2
Gohir.D05G029600 Gossypium hirsutum HOM05D006529 ORTHO05D008380 6.6e-74 281.2 206 64.6
Gorai.009G029800 Gossypium raimondii HOM05D006529 ORTHO05D008380 6.6e-74 281.2 206 64.6
Oeu052123.2 Olea europaea HOM05D006529 ORTHO05D008380 8.6e-74 280.8 225 61.3
Haze_25864 Corylus avellana HOM05D006529 ORTHO05D008380 1.1e-73 280.4 206 67.0
FAN14G0658 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.1e-73 280.4 200 66.5
Manes.16G105400 Manihot esculenta HOM05D006529 ORTHO05D008380 1.5e-73 280.0 211 64.5
Gohir.A05G027800 Gossypium hirsutum HOM05D006529 ORTHO05D008380 2.5e-73 279.3 206 64.6
CSS0046887 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 4.3e-73 278.5 208 66.3
Hund07265 Selenicereus undatus HOM05D006529 ORTHO05D008380 4.3e-73 278.5 206 65.0
CAN.G142.8 Capsicum annuum HOM05D006529 ORTHO05D008380 2.8e-72 275.8 208 63.5
Thecc.09G094900 Theobroma cacao HOM05D006529 ORTHO05D008380 3.6e-72 275.4 213 63.4
HanXRQChr09g0238511 Helianthus annuus HOM05D006529 ORTHO05D008380 6.1e-72 274.6 208 64.4
CANSAT56G2962 Cannabis sativa HOM05D006529 ORTHO05D008380 1.0e-71 273.9 187 70.6
AT4G26240 Arabidopsis thaliana HOM05D006529 ORTHO05D008380 1.8e-71 273.1 210 62.9
Potri.006G153800 Populus trichocarpa HOM05D006529 ORTHO05D008380 3.1e-71 272.3 210 62.4
TWI63G1011 Tripterygium wilfordii HOM05D006529 ORTHO05D008380 3.1e-71 272.3 206 64.6
MD15G1202100 Malus domestica HOM05D006529 ORTHO05D008380 5.2e-71 271.6 205 65.4
Carub.0007s1471 Capsella rubella HOM05D006529 ORTHO05D008380 2.0e-70 269.6 210 61.9
ClCG03G015880 Citrullus lanatus HOM05D006529 ORTHO05D008380 2.0e-70 269.6 213 62.4
Aqoxy7G01329 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 2.6e-70 269.2 207 63.3
AL7G26720 Arabidopsis lyrata HOM05D006529 ORTHO05D008380 4.4e-70 268.5 209 62.2
CARHR233790 Cardamine hirsuta HOM05D006529 ORTHO05D008380 5.8e-70 268.1 209 60.3
CDE05G3131 Ceratophyllum demersum HOM05D006529 ORTHO05D008380 5.8e-70 268.1 209 61.7
Ca_17386_v3 Cicer arietinum L. HOM05D006529 ORTHO05D008380 5.8e-70 268.1 201 66.2
COL.COLO4_18251 Corchorus olitorius HOM05D006529 ORTHO05D008380 5.8e-70 268.1 219 60.3
MSTRG.10586 Avicennia marina HOM05D006529 ORTHO05D008380 9.8e-70 267.3 206 64.6
Glyma.08G031000 Glycine max HOM05D006529 ORTHO05D008380 1.3e-69 266.9 201 66.2
Sp7g24240 Schrenkiella parvula HOM05D006529 ORTHO05D008380 1.3e-69 266.9 209 62.2
Thhalv10026289m.g Eutrema salsugineum HOM05D006529 ORTHO05D008380 1.7e-69 266.5 210 61.9
AUR62000487 Chenopodium quinoa HOM05D006529 ORTHO05D008380 2.9e-69 265.8 205 61.0
A03p56550 Brassica napus HOM05D006529 ORTHO05D008380 3.7e-69 265.4 210 60.5
Lalb_Chr05g0223501 Lupinus albus HOM05D006529 ORTHO05D008380 8.3e-69 264.2 208 63.0
PSO832G0687 Papaver somniferum HOM05D006529 ORTHO05D008380 1.1e-68 263.8 207 61.8
THA.LOC104813489 Tarenaya hassleriana HOM05D006529 ORTHO05D008380 1.1e-68 263.8 210 61.9
AUR62006831 Chenopodium quinoa HOM05D006529 ORTHO05D008380 2.4e-68 262.7 206 60.7
Migut.K00572 Erythranthe guttata HOM05D006529 ORTHO05D008380 2.4e-68 262.7 206 64.1
BcaC06g32765 Brassica carinata HOM05D006529 ORTHO05D008380 7.0e-68 261.2 211 60.2
Glyma.05G223900 Glycine max HOM05D006529 ORTHO05D008380 9.2e-68 260.8 201 64.7
Aqoxy199s004 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 1.6e-67 260.0 202 62.9
arahy.Tifrunner.gnm1.ann1.YG2MQU Arachis hypogaea HOM05D006529 ORTHO05D008380 2.0e-67 259.6 208 61.1
Ah.06g190810 Amaranthus hybridus HOM05D006529 ORTHO05D008380 4.6e-67 258.5 207 61.4
VMungo0251G0255 Vigna mungo HOM05D006529 ORTHO05D008380 4.6e-67 258.5 201 62.7
C07p54750 Brassica napus HOM05D006529 ORTHO05D008380 1.0e-66 257.3 210 59.5
BolC7t45964H Brassica oleracea HOM05D006529 ORTHO05D008380 1.0e-66 257.3 210 59.5
BraA03t14725Z Brassica rapa HOM05D006529 ORTHO05D008380 1.0e-66 257.3 210 58.6
arahy.Tifrunner.gnm1.ann1.HB8I5Y Arachis hypogaea HOM05D006529 ORTHO05D008380 1.3e-66 256.9 208 60.6
Medtr8g101990 Medicago truncatula HOM05D006529 ORTHO05D008380 2.3e-66 256.1 207 60.4
PSO063G6648 Papaver somniferum HOM05D006529 ORTHO05D008380 3.9e-66 255.4 207 59.9
Sed0011062 Sechium edule HOM05D006529 ORTHO05D008380 1.5e-65 253.4 200 62.0
Lj4g0018594 Lotus japonicus HOM05D006529 ORTHO05D008380 1.9e-65 253.1 201 61.7
Psat7g019320 Pisum sativum HOM05D006529 ORTHO05D008380 4.0e-63 245.4 206 59.2
SGA_v2.0_scaffold210G42089 Striga asiatica HOM05D006529 ORTHO05D008380 3.4e-62 242.3 197 61.9
MELO3C015437.2 Cucumis melo HOM05D006529 ORTHO05D008380 3.7e-61 238.8 213 55.9
SalBow1G6632 Salvia bowleyana HOM05D006529 ORTHO05D008380 5.4e-60 235.0 236 53.0
Phvul.002G305700 Phaseolus vulgaris HOM05D006529 ORTHO05D008380 7.0e-60 234.6 201 58.7
Peaxi162Scf00883g01013 Petunia axillaris HOM05D006529 ORTHO05D008380 5.6e-57 224.9 211 55.0
CsaV3_UNG050340 Cucumis sativus L. HOM05D006529 ORTHO05D008380 1.2e-56 223.8 135 71.1
TPR.G17281 Trifolium pratense HOM05D006529 ORTHO05D008380 4.0e-55 218.8 141 70.9
Lsat_1_v5_gn_7_38121 Lactuca sativa HOM05D006529 ORTHO05D008380 1.6e-51 206.8 158 61.4
FAN26G1500 Fragaria x ananassa HOM05D006529 ORTHO05D008380 3.9e-50 202.2 213 53.1
CANSAT56G3512 Cannabis sativa HOM05D006529 ORTHO05D008380 2.1e-48 196.4 172 57.0
Zm00001eb356780 Zea mays HOM05D006529 ORTHO05D008380 3.6e-48 195.7 175 53.1
Os01g0559300 Oryza sativa ssp. japonica HOM05D006529 ORTHO05D008380 8.1e-48 194.5 195 48.2
Cpa.g.sc78.59 Carica papaya HOM05D006529 ORTHO05D008380 9.2e-44 181.0 201 51.7
Sc18g0001790 Simmondsia chinensis HOM05D006529 ORTHO05D008380 2.3e-42 176.4 158 58.2
SalBow1G6389 Salvia bowleyana HOM05D006529 ORTHO05D008380 1.2e-38 164.1 135 59.3
Aa31LG3G600 Aethionema arabicum HOM05D006529 ORTHO05D008380 7.6e-38 161.4 175 49.1
CsaV3_1G040070 Cucumis sativus L. HOM05D006529 ORTHO05D008380 2.2e-37 159.8 168 50.0
HanXRQChr03g0061021 Helianthus annuus HOM05D006529 ORTHO05D008380 1.1e-36 157.5 108 65.7
FAN26G3434 Fragaria x ananassa HOM05D006529 ORTHO05D008380 3.2e-36 156.0 129 57.4
SHI02792 Sapria himalayana HOM05D006529 ORTHO05D008380 6.0e-27 125.2 125 48.8
HPP92_005506 Vanilla planifolia HOM05D006529 ORTHO05D008380 1.3e-26 124.0 176 40.3
SMO164G0011 Selaginella moellendorffii HOM05D006529 ORTHO05D008380 5.1e-26 122.1 172 39.5
Lalb_Chr09g0331701 Lupinus albus HOM05D006529 ORTHO05D008380 1.1e-25 120.9 67 77.6
Nitab4.5_0009098g0020 Nicotiana tabacum HOM05D006529 ORTHO05D008380 5.8e-22 108.6 94 62.8
CBR_g10883 Chara braunii HOM05D006529 ORTHO05D008380 4.2e-20 102.4 176 33.5
Sabra06G0122000 Salix brachista HOM05D006529 ORTHO05D008380 7.1e-20 101.7 111 53.2
Sabra06G0121800 Salix brachista HOM05D006529 ORTHO05D008380 2.7e-19 99.8 56 78.6
FAN27G1398 Fragaria x ananassa HOM05D006529 ORTHO05D008380 5.7e-17 92.0 92 54.3
SHI02791 Sapria himalayana HOM05D006529 ORTHO05D008380 2.6e-14 83.2 49 71.4
HanXRQChr03g0061031 Helianthus annuus HOM05D006529 ORTHO05D008380 7.6e-14 81.6 94 50.0
PGSC0003DMG400015618 Solanum tuberosum HOM05D006529 ORTHO05D008380 2.2e-13 80.1 81 56.8
RcHm_v2.0_Chr7g0226351 Rosa chinensis HOM05D006529 ORTHO05D008380 1.5e-09 67.4 68 54.4
Sopen08g011810 Solanum pennellii HOM05D006529 ORTHO05D008380 1.5e-09 67.4 72 47.2
Solyc08g041690.1 Solanum lycopersicum HOM05D006529 ORTHO05D008380 2.5e-09 66.6 36 77.8
Cre11.g467752 Chlamydomonas reinhardtii HOM05D006529 ORTHO05D008380 5.7e-09 65.5 210 29.5
C01p22040 Brassica napus HOM05D006529 ORTHO05D008380 2.2e-08 63.5 62 51.6
BolC1t02133H Brassica oleracea HOM05D006529 ORTHO05D008380 2.2e-08 63.5 62 51.6
Glyma.05G224100 Glycine max HOM05D006529 ORTHO05D008380 2.4e-07 60.1 31 74.2
Lalb_Chr09g0331711 Lupinus albus HOM05D006529 ORTHO05D008380 4.1e-07 59.3 55 54.5
FAN02G1845 Fragaria x ananassa HOM05D000599 ORTHO05D000554 6.9e-07 58.5 93 44.1


User provided reference genes

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