Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 5.5e-107 391.0 195 100.0
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 1.6e-77 293.1 231 69.7
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 8.6e-76 287.3 230 69.6
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 1.2e-74 283.5 230 67.8
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 5.2e-73 278.1 231 66.7
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 6.8e-73 277.7 225 68.0
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 8.8e-73 277.3 230 66.5
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 1.5e-72 276.6 231 66.2
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 4.4e-72 275.0 231 65.8
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 4.1e-70 268.5 230 66.1
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 4.1e-70 268.5 227 65.6
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 5.4e-70 268.1 224 65.2
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 1.6e-69 266.5 224 65.6
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 2.0e-69 266.2 230 64.3
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 2.7e-69 265.8 225 65.3
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 4.5e-69 265.0 222 66.7
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 1.0e-68 263.8 227 64.3
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 1.0e-68 263.8 223 65.5
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 2.3e-68 262.7 224 64.7
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 2.3e-68 262.7 240 61.7
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 2.9e-68 262.3 225 64.0
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 3.8e-68 261.9 223 65.0
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 5.0e-68 261.5 223 64.6
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 5.0e-68 261.5 230 62.6
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 5.0e-68 261.5 232 61.6
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 8.6e-68 260.8 232 61.6
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 8.6e-68 260.8 227 63.9
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 1.1e-67 260.4 230 63.9
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 1.5e-67 260.0 223 65.0
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 3.3e-67 258.8 231 61.5
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 4.3e-67 258.5 228 61.8
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 4.3e-67 258.5 222 65.3
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 4.3e-67 258.5 230 63.5
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 7.3e-67 257.7 229 62.0
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 7.3e-67 257.7 224 62.5
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 1.2e-66 256.9 230 63.5
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 2.1e-66 256.1 221 65.2
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 2.1e-66 256.1 230 61.3
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 2.1e-66 256.1 230 61.3
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 2.1e-66 256.1 230 61.3
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 4.7e-66 255.0 224 63.8
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 4.7e-66 255.0 230 62.2
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 4.7e-66 255.0 223 62.8
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 4.7e-66 255.0 230 63.0
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 6.1e-66 254.6 227 62.1
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 6.1e-66 254.6 225 62.2
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 1.8e-65 253.1 230 60.9
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 4.0e-65 251.9 225 61.8
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 5.2e-65 251.5 223 61.4
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 5.2e-65 251.5 225 62.2
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 6.8e-65 251.1 230 61.7
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 6.8e-65 251.1 223 61.4
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 8.9e-65 250.8 208 66.3
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 1.2e-64 250.4 251 59.0
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 1.2e-64 250.4 251 59.0
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 1.2e-64 250.4 230 60.9
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 1.2e-64 250.4 225 62.2
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 1.2e-64 250.4 225 62.2
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 1.5e-64 250.0 234 59.0
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 1.5e-64 250.0 230 60.0
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 2.0e-64 249.6 217 63.6
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 2.0e-64 249.6 216 63.0
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 2.6e-64 249.2 217 66.4
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 2.6e-64 249.2 221 62.9
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 3.4e-64 248.8 223 61.4
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 5.7e-64 248.1 230 60.4
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 9.8e-64 247.3 232 60.3
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 9.8e-64 247.3 232 60.3
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 1.3e-63 246.9 222 61.3
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 1.7e-63 246.5 216 62.5
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 2.2e-63 246.1 223 61.9
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 3.7e-63 245.4 230 59.6
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 4.9e-63 245.0 230 59.6
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 4.9e-63 245.0 210 67.1
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 6.4e-63 244.6 158 79.1
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 8.3e-63 244.2 230 59.6
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 8.3e-63 244.2 229 59.8
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 1.4e-62 243.4 222 61.3
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 4.1e-62 241.9 251 56.6
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 7.0e-62 241.1 222 59.9
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 2.7e-61 239.2 211 64.5
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 3.5e-61 238.8 163 76.7
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 3.5e-61 238.8 228 57.0
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 3.9e-60 235.3 210 63.3
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 1.9e-59 233.0 258 54.3
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 1.9e-59 233.0 208 62.5
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 5.6e-59 231.5 213 60.1
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 7.3e-59 231.1 217 61.3
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 2.9e-55 219.2 215 57.2
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 7.8e-53 211.1 198 59.6
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 8.6e-52 207.6 224 52.7
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 1.8e-49 199.9 221 50.2
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 1.2e-48 197.2 212 55.2
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 4.4e-48 195.3 169 66.3
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 6.4e-47 191.4 222 48.2
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 1.1e-46 190.7 183 61.2
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.4e-46 190.3 217 55.3
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 3.5e-45 185.7 222 47.7
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 1.0e-44 184.1 170 61.2
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 3.9e-44 182.2 222 47.3
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 4.4e-40 168.7 220 50.9
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 4.4e-40 168.7 229 46.3
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 1.3e-39 167.2 154 64.3
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 6.0e-37 158.3 143 62.2
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 2.4e-33 146.4 137 63.5
Sp7g27097 Schrenkiella parvula HOM05D006447 ORTHO05D007938 3.8e-31 139.0 112 62.5
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 3.2e-30 136.0 138 60.1
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 1.5e-27 127.1 93 69.9
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 6.0e-21 105.1 113 54.9
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 7.9e-21 104.8 120 53.3
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 8.7e-20 101.3 68 77.9
COL.COLO4_18261 Corchorus olitorius HOM05D006447 ORTHO05D007938 4.9e-15 85.5 39 89.7
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 1.4e-14 84.0 222 29.3
CBR_g8047 Chara braunii HOM05D006447 ORTHO05D007938 4.2e-14 82.4 105 42.9
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 3.9e-12 75.9 85 52.9
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 8.7e-12 74.7 85 52.9
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 6.2e-10 68.6 115 39.1
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 8.2e-10 68.2 101 48.5
Hma1.2p1_0663F.1_g198600 Hydrangea macrophylla HOM05D006447 ORTHO05D007938 7.6e-08 61.6 46 71.7
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 1.1e-06 57.8 212 24.1


User provided reference genes

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