Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42219 Davidia involucrata HOM05D006481 ORTHO05D008160 0.0e+00 1425.6 861 100.0
Dinv15788 Davidia involucrata HOM05D006481 ORTHO05D008160 8.4e-301 1036.9 882 76.4
CSS0020952 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 3.3e-220 769.2 875 60.0
CSS0029586 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 3.4e-217 759.2 875 59.5
Actinidia34372 Actinidia chinensis HOM05D006481 ORTHO05D008160 1.1e-215 754.2 902 58.5
TAR376G0872 Trochodendron aralioides HOM05D006481 ORTHO05D008160 7.6e-209 731.5 870 57.8
Haze_10252 Corylus avellana HOM05D006481 ORTHO05D008160 2.4e-207 726.5 952 54.7
Manes.10G058310 Manihot esculenta HOM05D006481 ORTHO05D008160 2.4e-207 726.5 881 59.5
Cfa004657 Carpinus fangiana HOM05D006481 ORTHO05D008160 1.7e-205 720.3 951 54.6
CiPaw.05G015400 Carya illinoinensis HOM05D006481 ORTHO05D008160 2.5e-196 689.9 882 52.3
TWI14G1262 Tripterygium wilfordii HOM05D006481 ORTHO05D008160 3.8e-192 676.0 888 53.6
Thecc.02G113600 Theobroma cacao HOM05D006481 ORTHO05D008160 4.2e-191 672.5 882 55.2
QL11p031947 Quercus lobata HOM05D006481 ORTHO05D008160 3.5e-190 669.5 879 57.8
DCAR_021965 Daucus carota HOM05D006481 ORTHO05D008160 3.9e-189 666.0 956 51.0
Gohir.D12G020600 Gossypium hirsutum HOM05D006481 ORTHO05D008160 1.1e-183 647.9 898 50.8
Prupe.8G140600 Prunus persica HOM05D006481 ORTHO05D008160 4.2e-183 646.0 875 55.2
COL.COLO4_32543 Corchorus olitorius HOM05D006481 ORTHO05D008160 3.8e-176 622.9 875 51.0
Duzib132G1015 Durio zibethinus HOM05D006481 ORTHO05D008160 2.5e-175 620.2 886 49.7
Nitab4.5_0001105g0200 Nicotiana tabacum HOM05D006481 ORTHO05D008160 2.1e-174 617.1 864 54.5
Gorai.008G021000 Gossypium raimondii HOM05D006481 ORTHO05D008160 2.3e-173 613.6 949 46.6
FvH4_2g03900 Fragaria vesca HOM05D006481 ORTHO05D008160 1.8e-170 604.0 870 52.3
Lj5A217G88 Lonicera japonica HOM05D006481 ORTHO05D008160 4.1e-170 602.8 920 50.7
MD05G1096200 Malus domestica HOM05D006481 ORTHO05D008160 4.1e-170 602.8 925 51.9
RcHm_v2.0_Chr6g0252931 Rosa chinensis HOM05D006481 ORTHO05D008160 4.1e-170 602.8 873 52.9
Nitab4.5_0004685g0050 Nicotiana tabacum HOM05D006481 ORTHO05D008160 9.0e-170 601.7 878 53.0
FAN27G2785 Fragaria x ananassa HOM05D006481 ORTHO05D008160 1.2e-169 601.3 870 52.1
Gohir.A12G020400 Gossypium hirsutum HOM05D006481 ORTHO05D008160 1.7e-168 597.4 899 49.9
vmacro01976 Vaccinium macrocarpon HOM05D006481 ORTHO05D008160 2.9e-168 596.7 883 50.7
FAN15G2146 Fragaria x ananassa HOM05D006481 ORTHO05D008160 8.8e-165 585.1 870 51.8
Sopen01g049510 Solanum pennellii HOM05D006481 ORTHO05D008160 2.2e-163 580.5 929 50.6
Cpa.g.sc106.79 Carica papaya HOM05D006481 ORTHO05D008160 1.4e-162 577.8 1029 47.5
Potri.009G090900 Populus trichocarpa HOM05D006481 ORTHO05D008160 2.6e-161 573.5 873 50.4
MSTRG.16692 Avicennia marina HOM05D006481 ORTHO05D008160 3.8e-160 569.7 880 48.5
Rhsim11G0154700 Rhododendron simsii HOM05D006481 ORTHO05D008160 3.8e-160 569.7 895 48.6
Potri.001G296700 Populus trichocarpa HOM05D006481 ORTHO05D008160 7.2e-159 565.5 873 49.8
Solyc01g107260.4 Solanum lycopersicum HOM05D006481 ORTHO05D008160 2.7e-158 563.5 922 48.5
RhsimUnG0125900 Rhododendron simsii HOM05D006481 ORTHO05D008160 3.0e-157 560.1 991 44.8
Lj5g0022753 Lotus japonicus HOM05D006481 ORTHO05D008160 2.2e-155 553.9 845 50.5
Cc02_g30880 Coffea canephora HOM05D006481 ORTHO05D008160 3.2e-151 540.0 910 45.1
CAN.G606.42 Capsicum annuum HOM05D006481 ORTHO05D008160 7.2e-151 538.9 1016 46.1
PSO675G3182 Papaver somniferum HOM05D006481 ORTHO05D008160 6.1e-150 535.8 886 49.3
Lalb_Chr02g0145111 Lupinus albus HOM05D006481 ORTHO05D008160 1.4e-149 534.6 928 46.7
Oeu021369.1 Olea europaea HOM05D006481 ORTHO05D008160 1.4e-149 534.6 862 47.9
MELO3C017986.2 Cucumis melo HOM05D006481 ORTHO05D008160 8.8e-149 531.9 870 46.7
arahy.Tifrunner.gnm1.ann1.RQ9967 Arachis hypogaea HOM05D006481 ORTHO05D008160 2.0e-148 530.8 821 48.1
PSO541G1903 Papaver somniferum HOM05D006481 ORTHO05D008160 9.7e-148 528.5 886 48.9
arahy.Tifrunner.gnm1.ann1.IH69Y8 Arachis hypogaea HOM05D006481 ORTHO05D008160 1.1e-146 525.0 821 48.0
Ciclev10027845m.g Citrus clementina HOM05D006481 ORTHO05D008160 5.0e-144 516.2 862 44.2
Medtr1g106795 Medicago truncatula HOM05D006481 ORTHO05D008160 2.5e-143 513.8 844 48.1
GSVIVG01037865001 Vitis vinifera HOM05D006481 ORTHO05D008160 7.2e-143 512.3 825 43.5
CsaV3_4G000490 Cucumis sativus L. HOM05D006481 ORTHO05D008160 1.5e-140 504.6 872 45.5
Ca_11047_v3 Cicer arietinum L. HOM05D006481 ORTHO05D008160 2.6e-140 503.8 844 48.9
Aqoxy6G02732 Aquilegia oxysepala HOM05D006481 ORTHO05D008160 6.3e-139 499.2 928 45.4
Sabra09G0070200 Salix brachista HOM05D006481 ORTHO05D008160 2.9e-136 490.3 870 47.2
Sed0008985 Sechium edule HOM05D006481 ORTHO05D008160 1.1e-135 488.4 894 44.1
Peaxi162Scf00016g02732 Petunia axillaris HOM05D006481 ORTHO05D008160 1.8e-133 481.1 820 50.6
TPR.G27130 Trifolium pratense HOM05D006481 ORTHO05D008160 3.4e-132 476.9 845 48.3
VMungo0720G0067 Vigna mungo HOM05D006481 ORTHO05D008160 5.4e-130 469.5 857 44.6
Sabra16G0185800 Salix brachista HOM05D006481 ORTHO05D008160 3.5e-129 466.8 874 45.8
Glyma.20G132200 Glycine max HOM05D006481 ORTHO05D008160 4.5e-129 466.5 884 43.6
Phvul.007G043300 Phaseolus vulgaris HOM05D006481 ORTHO05D008160 2.9e-128 463.8 934 44.9
Ah.14g085520 Amaranthus hybridus HOM05D006481 ORTHO05D008160 3.8e-128 463.4 904 44.6
Atru.BG.62.p Acer truncatum HOM05D006481 ORTHO05D008160 1.2e-126 458.4 457 60.2
AUR62031332 Chenopodium quinoa HOM05D006481 ORTHO05D008160 4.0e-125 453.4 810 44.4
PGSC0003DMG400025848 Solanum tuberosum HOM05D006481 ORTHO05D008160 5.7e-124 449.5 912 45.5
SalBow6G0734 Salvia bowleyana HOM05D006481 ORTHO05D008160 6.4e-123 446.0 862 42.2
AUR62027350 Chenopodium quinoa HOM05D006481 ORTHO05D008160 1.6e-121 441.4 817 43.3
THA.LOC104825834 Tarenaya hassleriana HOM05D006481 ORTHO05D008160 5.9e-121 439.5 895 42.5
ClCG10G010570 Citrullus lanatus HOM05D006481 ORTHO05D008160 7.3e-119 432.6 755 41.2
Migut.B00421 Erythranthe guttata HOM05D006481 ORTHO05D008160 1.8e-117 427.9 863 39.4
EL10Ac8g19363 Beta vulgaris HOM05D006481 ORTHO05D008160 3.1e-117 427.2 869 41.7
unitig_744.g24217 Utricularia gibba HOM05D006481 ORTHO05D008160 5.2e-117 426.4 864 39.8
Eucgr.I01079 Eucalyptus grandis HOM05D006481 ORTHO05D008160 1.3e-115 421.8 772 44.6
Psat6g216240 Pisum sativum HOM05D006481 ORTHO05D008160 2.9e-115 420.6 403 60.8
Aa31LG10G4220 Aethionema arabicum HOM05D006481 ORTHO05D008160 8.3e-115 419.1 516 52.3
TAR628G0609 Trochodendron aralioides HOM05D006481 ORTHO05D008160 2.5e-111 407.5 503 53.5
ECA234G0568 Erigeron canadensis HOM05D006481 ORTHO05D008160 1.2e-110 405.2 864 38.3
Sp1g36750 Schrenkiella parvula HOM05D006481 ORTHO05D008160 2.3e-109 401.0 883 41.2
AL1G57410 Arabidopsis lyrata HOM05D006481 ORTHO05D008160 4.0e-109 400.2 437 55.6
AT1G49870 Arabidopsis thaliana HOM05D006481 ORTHO05D008160 4.4e-108 396.7 432 55.3
Thhalv10011233m.g Eutrema salsugineum HOM05D006481 ORTHO05D008160 1.4e-106 391.7 923 39.9
Lsat_1_v5_gn_5_114361 Lactuca sativa HOM05D006481 ORTHO05D008160 6.0e-105 386.3 462 52.2
A08p03520 Brassica napus HOM05D006481 ORTHO05D008160 3.3e-103 380.6 848 40.0
Carub.0001s3908 Capsella rubella HOM05D006481 ORTHO05D008160 3.3e-103 380.6 678 42.2
HanXRQChr16g0514441 Helianthus annuus HOM05D006481 ORTHO05D008160 1.5e-100 371.7 384 58.1
ATR0030G005 Amborella trichopoda HOM05D006481 ORTHO05D008160 2.9e-99 367.5 840 40.4
SGA_v2.0_scaffold225G43011 Striga asiatica HOM05D006481 ORTHO05D008160 1.9e-98 364.8 877 40.3
CARHR039920 Cardamine hirsuta HOM05D006481 ORTHO05D008160 7.1e-98 362.8 370 57.3
BraA08t32385Z Brassica rapa HOM05D006481 ORTHO05D008160 4.6e-97 360.1 848 39.7
C08p03680 Brassica napus HOM05D006481 ORTHO05D008160 3.9e-96 357.1 852 39.1
BolC8t47171H Brassica oleracea HOM05D006481 ORTHO05D008160 7.3e-95 352.8 903 38.5
BcaB04g17289 Brassica carinata HOM05D006481 ORTHO05D008160 6.2e-94 349.7 930 37.3
Os03g0604600 Oryza sativa ssp. japonica HOM05D006481 ORTHO05D008160 9.9e-92 342.4 476 47.5
Zm00001eb050130 Zea mays HOM05D006481 ORTHO05D008160 3.4e-84 317.4 853 36.7
HPP92_017760 Vanilla planifolia HOM05D006481 ORTHO05D008160 2.3e-80 304.7 393 48.6
TAR628G0206 Trochodendron aralioides HOM05D006481 ORTHO05D008160 5.3e-61 240.4 295 61.7
FAN20G1292 Fragaria x ananassa HOM05D006481 ORTHO05D008160 7.9e-57 226.5 578 43.8
Sc14g0002570 Simmondsia chinensis HOM05D006481 ORTHO05D008160 1.0e-56 226.1 706 38.1
SEGI_11188 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 8.7e-56 223.0 309 46.3
SEGI_37018 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 8.7e-56 223.0 309 46.3
CDE04G1272 Ceratophyllum demersum HOM05D006481 ORTHO05D008160 1.8e-53 215.3 337 44.5
MD10G1102400 Malus domestica HOM05D006481 ORTHO05D008160 2.2e-43 181.8 149 67.8
Pp3c18_18840 Physcomitrium patens HOM05D006481 ORTHO05D008160 7.0e-37 160.2 320 40.9
SEGI_25924 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 1.2e-36 159.5 875 28.6
SMO196G0099 Selaginella moellendorffii HOM05D006481 ORTHO05D008160 3.3e-31 141.4 284 38.7
SHI05066 Sapria himalayana HOM05D006481 ORTHO05D008160 1.6e-28 132.5 132 58.3
Hma1.2p1_0000F.1_g001000 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 1.3e-27 129.4 458 30.8
Hma1.2p1_1361F.1_g278150 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 3.2e-26 124.8 326 36.8
EL10Ac6g13964 Beta vulgaris HOM05D006481 ORTHO05D008160 1.2e-25 122.9 195 45.1
Duzib052G0964 Durio zibethinus HOM05D006481 ORTHO05D008160 4.0e-24 117.9 146 50.0
CBR_g49330 Chara braunii HOM05D006481 ORTHO05D008160 2.0e-20 105.5 167 43.7
MD10G1102500 Malus domestica HOM05D006481 ORTHO05D008160 1.7e-19 102.4 138 50.7
Atru.chr5.2411 Acer truncatum HOM05D006481 ORTHO05D008160 3.8e-19 101.3 62 77.4
RcHm_v2.0_Chr6g0252961 Rosa chinensis HOM05D006481 ORTHO05D008160 5.2e-16 90.9 62 67.7
Oeu039499.1 Olea europaea HOM05D006481 ORTHO05D008160 5.7e-15 87.4 125 56.8
RcHm_v2.0_Chr4g0423461 Rosa chinensis HOM05D006481 ORTHO05D000001 1.6e-12 79.3 124 41.9
SGA_v2.0_scaffold4001G54416 Striga asiatica HOM05D006481 ORTHO05D008160 2.7e-12 78.6 62 62.9
Hma1.2p1_0883F.1_g232290 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 3.8e-11 74.7 48 81.2
SHI05065 Sapria himalayana HOM05D006481 ORTHO05D008160 4.3e-10 71.2 116 40.5
BcaC05g27423 Brassica carinata HOM05D006481 ORTHO05D008160 2.0e-07 62.4 56 55.4


User provided reference genes

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