Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42191 Davidia involucrata HOM05D006149 ORTHO05D007341 7.2e-69 264.2 182 100.0
Dinv15763 Davidia involucrata HOM05D006149 ORTHO05D007341 3.7e-57 225.3 131 89.3
CSS0036049 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 4.4e-50 201.8 127 84.3
Lj9A321G81 Lonicera japonica HOM05D006149 ORTHO05D007341 7.5e-50 201.1 130 81.5
Nn1g04703 Nelumbo nucifera HOM05D006149 ORTHO05D007341 1.7e-49 199.9 131 81.7
Nn4g25119 Nelumbo nucifera HOM05D006149 ORTHO05D007341 2.2e-49 199.5 131 80.9
vmacro19450 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 7.0e-48 194.5 132 78.8
Rhsim11G0160200 Rhododendron simsii HOM05D006149 ORTHO05D007341 6.6e-46 188.0 183 60.7
Sopen01g049800 Solanum pennellii HOM05D006149 ORTHO05D007341 8.6e-46 187.6 123 79.7
PGSC0003DMG400025768 Solanum tuberosum HOM05D006149 ORTHO05D007341 8.6e-46 187.6 123 79.7
Actinidia27971 Actinidia chinensis HOM05D006149 ORTHO05D007341 1.1e-45 187.2 128 77.3
Lsat_1_v5_gn_9_111221 Lactuca sativa HOM05D006149 ORTHO05D007341 1.1e-45 187.2 133 77.4
Nitab4.5_0005392g0090 Nicotiana tabacum HOM05D006149 ORTHO05D007341 3.3e-45 185.7 124 79.0
Solyc01g107610.4 Solanum lycopersicum HOM05D006149 ORTHO05D007341 5.6e-45 184.9 123 78.9
Nitab4.5_0002815g0010 Nicotiana tabacum HOM05D006149 ORTHO05D007341 1.6e-44 183.3 124 77.4
Rhsim05G0088300 Rhododendron simsii HOM05D006149 ORTHO05D007341 1.6e-44 183.3 133 76.7
TWI32G0763 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 1.1e-43 180.6 131 79.4
unitig_22.g5723 Utricularia gibba HOM05D006149 ORTHO05D007341 4.0e-43 178.7 130 71.5
TWI34G0529 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 5.2e-43 178.3 134 77.6
Ca_11076_v3 Cicer arietinum L. HOM05D006149 ORTHO05D007341 8.9e-43 177.6 131 73.3
CAN.G1231.7 Capsicum annuum HOM05D006149 ORTHO05D007341 1.2e-42 177.2 125 75.2
Gohir.A03G186300 Gossypium hirsutum HOM05D006149 ORTHO05D007341 1.5e-42 176.8 130 75.4
SGA_v2.0_scaffold225G43080 Striga asiatica HOM05D006149 ORTHO05D007341 1.5e-42 176.8 131 74.0
VMungo0720G1566 Vigna mungo HOM05D006149 ORTHO05D007341 2.0e-42 176.4 131 73.3
Sabra09G0073900 Salix brachista HOM05D006149 ORTHO05D007341 2.6e-42 176.0 121 80.2
Glyma.20G128800 Glycine max HOM05D006149 ORTHO05D007341 5.8e-42 174.9 131 73.3
Potri.001G300300 Populus trichocarpa HOM05D006149 ORTHO05D007341 9.8e-42 174.1 120 80.0
TAR628G0594 Trochodendron aralioides HOM05D006149 ORTHO05D007341 1.3e-41 173.7 121 73.6
HanXRQChr03g0070291 Helianthus annuus HOM05D006149 ORTHO05D007341 1.7e-41 173.3 135 74.1
AUR62039082 Chenopodium quinoa HOM05D006149 ORTHO05D007341 2.2e-41 172.9 133 69.2
Gohir.D02G207100 Gossypium hirsutum HOM05D006149 ORTHO05D007341 2.2e-41 172.9 128 75.0
Gorai.005G235000 Gossypium raimondii HOM05D006149 ORTHO05D007341 2.2e-41 172.9 128 75.0
PGR142G0815 Punica granatum HOM05D006149 ORTHO05D007341 2.2e-41 172.9 132 74.2
COL.COLO4_32597 Corchorus olitorius HOM05D006149 ORTHO05D007341 2.9e-41 172.6 131 71.0
Cpa.g.sc76.22 Carica papaya HOM05D006149 ORTHO05D007341 3.7e-41 172.2 139 71.2
Cfa004575 Carpinus fangiana HOM05D006149 ORTHO05D007341 8.3e-41 171.0 131 74.0
ECA240G2462 Erigeron canadensis HOM05D006149 ORTHO05D007341 1.1e-40 170.6 137 70.1
Manes.10G076500 Manihot esculenta HOM05D006149 ORTHO05D007341 2.4e-40 169.5 128 73.4
SalBow6G4084 Salvia bowleyana HOM05D006149 ORTHO05D007341 2.4e-40 169.5 132 69.7
Medtr1g107435 Medicago truncatula HOM05D006149 ORTHO05D007341 3.2e-40 169.1 131 71.0
Sc08g0001390 Simmondsia chinensis HOM05D006149 ORTHO05D007341 3.2e-40 169.1 134 70.1
Duzib052G0317 Durio zibethinus HOM05D006149 ORTHO05D007341 4.1e-40 168.7 129 73.6
arahy.Tifrunner.gnm1.ann1.0F7AFP Arachis hypogaea HOM05D006149 ORTHO05D007341 5.4e-40 168.3 132 73.5
MSTRG.16714 Avicennia marina HOM05D006149 ORTHO05D007341 5.4e-40 168.3 133 68.4
Migut.B00388 Erythranthe guttata HOM05D006149 ORTHO05D007341 5.4e-40 168.3 136 70.6
Phvul.007G040000 Phaseolus vulgaris HOM05D006149 ORTHO05D007341 5.4e-40 168.3 131 71.0
Lj5g0003815 Lotus japonicus HOM05D006149 ORTHO05D007341 7.1e-40 167.9 131 71.0
Hund06318 Selenicereus undatus HOM05D006149 ORTHO05D007341 9.2e-40 167.5 136 68.4
arahy.Tifrunner.gnm1.ann1.GUMB1Z Arachis hypogaea HOM05D006149 ORTHO05D007341 1.6e-39 166.8 132 72.7
Oeu017469.1 Olea europaea HOM05D006149 ORTHO05D007341 1.6e-39 166.8 130 73.1
Thecc.02G107700 Theobroma cacao HOM05D006149 ORTHO05D007341 2.7e-39 166.0 131 69.5
MD05G1089500 Malus domestica HOM05D006149 ORTHO05D007341 3.5e-39 165.6 135 71.1
Psat6g219120 Pisum sativum HOM05D006149 ORTHO05D007341 2.3e-38 162.9 126 70.6
RcHm_v2.0_Chr6g0255351 Rosa chinensis HOM05D006149 ORTHO05D007341 3.0e-38 162.5 128 74.2
Glyma.10G262200 Glycine max HOM05D006149 ORTHO05D007341 5.1e-38 161.8 126 68.3
ATR0618G054 Amborella trichopoda HOM05D006149 ORTHO05D007341 6.6e-38 161.4 133 68.4
MELO3C019546.2 Cucumis melo HOM05D006149 ORTHO05D007341 1.9e-37 159.8 131 70.2
CANSAT25G3711 Cannabis sativa HOM05D006149 ORTHO05D007341 4.3e-37 158.7 120 71.7
CsaV3_3G018210 Cucumis sativus L. HOM05D006149 ORTHO05D007341 4.3e-37 158.7 131 69.5
Prupe.8G134800 Prunus persica HOM05D006149 ORTHO05D007341 7.3e-37 157.9 117 76.9
Sed0001717 Sechium edule HOM05D006149 ORTHO05D007341 9.5e-37 157.5 131 69.5
PSO675G5876 Papaver somniferum HOM05D006149 ORTHO05D007341 1.2e-36 157.1 132 65.9
vmacro02004 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 1.6e-36 156.8 181 54.1
THA.LOC104807242 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 6.2e-36 154.8 97 80.4
Ciclev10029393m.g Citrus clementina HOM05D006149 ORTHO05D007341 8.1e-36 154.5 126 68.3
PSO541G1364 Papaver somniferum HOM05D006149 ORTHO05D007341 8.1e-36 154.5 130 66.2
Peaxi162Scf00016g02334 Petunia axillaris HOM05D006149 ORTHO05D007341 8.1e-36 154.5 124 71.0
CDE02G2507 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 1.1e-35 154.1 130 69.2
CDE02G4185 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 1.1e-35 154.1 130 69.2
Sabra16G0188500 Salix brachista HOM05D006149 ORTHO05D007341 4.0e-35 152.1 160 57.5
FAN20G0990 Fragaria x ananassa HOM05D006149 ORTHO05D007341 6.8e-35 151.4 117 73.5
MD05G1088900 Malus domestica HOM05D006149 ORTHO05D007341 6.8e-35 151.4 186 53.8
ClCG05G010280 Citrullus lanatus HOM05D006149 ORTHO05D007341 1.2e-34 150.6 125 69.6
CDE04G1609 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 1.7e-33 146.7 130 66.2
AUR62010304 Chenopodium quinoa HOM05D006149 ORTHO05D007341 1.7e-33 146.7 112 68.8
FvH4_2g05220 Fragaria vesca HOM05D006149 ORTHO05D007341 2.2e-33 146.4 129 67.4
FAN15G1894 Fragaria x ananassa HOM05D006149 ORTHO05D007341 2.2e-33 146.4 129 67.4
FAN24G0478 Fragaria x ananassa HOM05D000289 ORTHO05D007341 2.2e-33 146.4 129 67.4
AL3G46990 Arabidopsis lyrata HOM05D006149 ORTHO05D007341 6.4e-33 144.8 131 62.6
FAN27G1351 Fragaria x ananassa HOM05D000289 ORTHO05D007341 6.4e-33 144.8 129 66.7
Eucgr.E02957 Eucalyptus grandis HOM05D006149 ORTHO05D007341 1.1e-32 144.1 128 67.2
BcaC06g36046 Brassica carinata HOM05D006149 ORTHO05D007341 1.4e-32 143.7 129 62.8
BcaC04g22139 Brassica carinata HOM05D006149 ORTHO05D007341 1.9e-32 143.3 129 62.0
C07p08530 Brassica napus HOM05D006149 ORTHO05D007341 1.9e-32 143.3 129 62.0
BolC7t41265H Brassica oleracea HOM05D006149 ORTHO05D007341 1.9e-32 143.3 129 62.0
HPP92_004777 Vanilla planifolia HOM05D006149 ORTHO05D007341 2.4e-32 142.9 125 68.0
HanXRQChr02g0033021 Helianthus annuus HOM05D006149 ORTHO05D007341 3.2e-32 142.5 116 73.3
SHI05287 Sapria himalayana HOM05D006149 ORTHO05D007341 3.2e-32 142.5 131 62.6
Sed0008540 Sechium edule HOM05D006149 ORTHO05D007341 3.2e-32 142.5 116 69.0
Aqoxy3G02908 Aquilegia oxysepala HOM05D006149 ORTHO05D007341 4.1e-32 142.1 134 61.9
Lalb_Chr21g0308351 Lupinus albus HOM05D006149 ORTHO05D007341 5.4e-32 141.7 125 64.0
QL11p033743 Quercus lobata HOM05D006149 ORTHO05D007341 5.4e-32 141.7 154 57.1
Sp3g28510 Schrenkiella parvula HOM05D006149 ORTHO05D007341 5.4e-32 141.7 132 59.1
DCAR_001643 Daucus carota HOM05D006149 ORTHO05D007341 1.2e-31 140.6 96 76.0
Thhalv10022867m.g Eutrema salsugineum HOM05D006149 ORTHO05D007341 1.2e-31 140.6 132 58.3
CiPaw.05G011400 Carya illinoinensis HOM05D006149 ORTHO05D007341 2.1e-31 139.8 117 68.4
THA.LOC104819555 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 3.5e-31 139.0 81 86.4
BcaB03g16271 Brassica carinata HOM05D006149 ORTHO05D007341 4.6e-31 138.7 130 59.2
A07p05350 Brassica napus HOM05D006149 ORTHO05D007341 4.6e-31 138.7 128 59.4
BraA07t28328Z Brassica rapa HOM05D006149 ORTHO05D007341 4.6e-31 138.7 128 59.4
CSS0028016 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 1.0e-30 137.5 89 80.9
Os09g0104300 Oryza sativa ssp. japonica HOM05D006149 ORTHO05D007341 1.7e-30 136.7 116 65.5
AT2G15270 Arabidopsis thaliana HOM05D006149 ORTHO05D007341 2.3e-30 136.3 126 61.1
CARHR105640 Cardamine hirsuta HOM05D006149 ORTHO05D007341 2.3e-30 136.3 127 61.4
Aa31LG8G13110 Aethionema arabicum HOM05D006149 ORTHO05D007341 5.1e-30 135.2 136 57.4
Carub.0003s2910 Capsella rubella HOM05D006149 ORTHO05D007341 5.1e-30 135.2 125 60.8
Duzib248G1531 Durio zibethinus HOM05D006149 ORTHO05D007341 6.6e-30 134.8 130 63.8
BcaB08g34585 Brassica carinata HOM05D006149 ORTHO05D007341 8.6e-30 134.4 132 56.8
Pp3c2_21780 Physcomitrium patens HOM05D006149 ORTHO05D007341 8.6e-30 134.4 140 60.7
Zm00001eb393310 Zea mays HOM05D006149 ORTHO05D007341 9.6e-29 131.0 111 67.6
AagrBONN_evm.TU.Sc2ySwM_228.2976 Anthoceros agrestis HOM05D006149 ORTHO05D007341 2.1e-28 129.8 124 58.9
Actinidia05494 Actinidia chinensis HOM05D006149 ORTHO05D007341 2.8e-28 129.4 88 76.1
SEGI_00829 Sequoiadendron giganteum HOM05D006149 ORTHO05D007341 2.8e-28 129.4 126 59.5
Zm00001eb020500 Zea mays HOM05D006149 ORTHO05D007341 3.6e-28 129.0 75 85.3
SMO364G0740 Selaginella moellendorffii HOM05D006149 ORTHO05D007341 2.0e-26 123.2 125 58.4
EL10Ac9g22279 Beta vulgaris HOM05D006149 ORTHO05D007341 3.4e-26 122.5 138 53.6
Pp3c1_15220 Physcomitrium patens HOM05D006149 ORTHO05D007341 9.9e-26 120.9 134 56.0
CANSAT25G0333 Cannabis sativa HOM05D006149 ORTHO05D007341 4.9e-25 118.6 108 63.0
CBR_g44544 Chara braunii HOM05D006149 ORTHO05D007341 1.4e-24 117.1 124 58.1
Mapoly0056s0071 Marchantia polymorpha HOM05D006149 ORTHO05D007341 6.0e-23 111.7 114 57.0
Haze_10168 Corylus avellana HOM05D006149 ORTHO05D007341 9.6e-21 104.4 254 35.0
Ciclev10006213m.g Citrus clementina HOM05D006149 ORTHO05D007341 1.3e-20 104.0 112 54.5
TAR376G0787 Trochodendron aralioides HOM05D006149 ORTHO05D007341 2.8e-20 102.8 76 69.7
PGR042G0697 Punica granatum HOM05D006149 ORTHO05D007341 3.6e-20 102.4 84 64.3
Ah.01g018230 Amaranthus hybridus HOM05D006149 ORTHO05D007341 1.1e-13 80.9 137 44.5
MBI12_g27878_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 1.5e-13 80.5 95 53.7
Cre03.g193150 Chlamydomonas reinhardtii HOM05D006149 ORTHO05D007341 2.5e-13 79.7 116 44.8
QL11p033903 Quercus lobata HOM05D006149 ORTHO05D007341 8.1e-12 74.7 45 84.4
Lsat_1_v5_gn_5_63380 Lactuca sativa HOM05D000113 ORTHO05D012184 2.2e-09 66.6 48 70.8
SMO197G0096 Selaginella moellendorffii HOM05D024641 ORTHO05D007341 2.2e-09 66.6 81 51.9
Thecc.04G122800 Theobroma cacao HOM05D006149 ORTHO05D007341 1.6e-07 60.5 42 69.0
MCO08G345 Micromonas commoda HOM05D006149 ORTHO05D007341 2.7e-07 59.7 82 42.7
MBI03_g28533_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 8.7e-06 54.7 82 45.1


User provided reference genes

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