Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42184 Davidia involucrata HOM05D000049 ORTHO05D008785 2.1e-71 272.3 142 100.0
Duzib132G0396 Durio zibethinus HOM05D000049 ORTHO05D008785 7.2e-48 194.1 135 77.8
Thecc.02G106900 Theobroma cacao HOM05D000049 ORTHO05D008785 1.6e-47 193.0 135 77.8
Duzib248G1051 Durio zibethinus HOM05D000049 ORTHO05D008785 6.7e-46 187.6 135 74.8
Hma1.2p1_0796F.1_g219130 Hydrangea macrophylla HOM05D000049 ORTHO05D008785 2.8e-44 182.2 132 76.5
Atru.chr5.2581 Acer truncatum HOM05D000049 ORTHO05D008785 8.2e-44 180.6 135 71.9
Cc02_g19180 Coffea canephora HOM05D000049 ORTHO05D008785 1.3e-41 173.3 135 68.9
Manes.02G137400 Manihot esculenta HOM05D000049 ORTHO05D008785 2.2e-41 172.6 136 73.5
Atru.chr11.1081 Acer truncatum HOM05D000049 ORTHO05D008785 2.9e-41 172.2 135 71.1
GSVIVG01003167001 Vitis vinifera HOM05D000049 ORTHO05D008785 1.1e-40 170.2 133 69.2
Cpa.g.sc106.84 Carica papaya HOM05D000049 ORTHO05D008785 5.5e-40 167.9 137 71.5
CSS0024818 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 7.2e-40 167.5 131 71.0
Ciclev10029534m.g Citrus clementina HOM05D000049 ORTHO05D008785 7.2e-40 167.5 135 71.9
Nn1g04714 Nelumbo nucifera HOM05D000049 ORTHO05D008785 7.2e-40 167.5 133 69.9
Dinv15757 Davidia involucrata HOM05D000049 ORTHO05D008785 4.7e-39 164.9 116 75.0
Gohir.A03G186700 Gossypium hirsutum HOM05D000049 ORTHO05D008785 6.1e-39 164.5 138 69.6
CSS0021501 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 7.9e-39 164.1 131 69.5
Gohir.D02G207500 Gossypium hirsutum HOM05D000049 ORTHO05D008785 2.3e-38 162.5 138 68.8
Aqoxy5G01153 Aquilegia oxysepala HOM05D000049 ORTHO05D008785 8.8e-38 160.6 109 77.1
Gorai.005G235400 Gossypium raimondii HOM05D000049 ORTHO05D008785 1.1e-37 160.2 138 68.1
Potri.009G096800 Populus trichocarpa HOM05D000049 ORTHO05D008785 1.1e-37 160.2 135 65.9
Prupe.8G134100 Prunus persica HOM05D000049 ORTHO05D008785 1.1e-37 160.2 136 67.6
QL11p033983 Quercus lobata HOM05D000049 ORTHO05D008785 2.6e-37 159.1 136 68.4
VMungo0720G1000 Vigna mungo HOM05D000049 ORTHO05D008785 4.4e-37 158.3 135 66.7
Potri.001G301100 Populus trichocarpa HOM05D000049 ORTHO05D008785 7.4e-37 157.5 135 65.9
Actinidia27967 Actinidia chinensis HOM05D000049 ORTHO05D008785 3.7e-36 155.2 135 66.7
Sabra16G0189300 Salix brachista HOM05D000049 ORTHO05D008785 3.7e-36 155.2 135 64.4
CSS0023695 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 6.3e-36 154.5 135 67.4
Eucgr.H03224 Eucalyptus grandis HOM05D000049 ORTHO05D008785 8.2e-36 154.1 136 65.4
Phvul.007G038900 Phaseolus vulgaris HOM05D000049 ORTHO05D008785 1.4e-35 153.3 135 65.2
Haze_10161 Corylus avellana HOM05D000049 ORTHO05D008785 3.1e-35 152.1 138 66.7
CANSAT25G0973 Cannabis sativa HOM05D000049 ORTHO05D008785 7.0e-35 151.0 135 65.9
TAR381G1170 Trochodendron aralioides HOM05D000049 ORTHO05D008785 7.0e-35 151.0 135 60.7
CANSAT25G0620 Cannabis sativa HOM05D000049 ORTHO05D008785 1.6e-34 149.8 135 65.2
Glyma.20G127500 Glycine max HOM05D000049 ORTHO05D008785 2.0e-34 149.4 135 63.7
MD05G1088100 Malus domestica HOM05D000049 ORTHO05D008785 2.0e-34 149.4 135 62.2
EL10Ac9g22295 Beta vulgaris HOM05D000049 ORTHO05D008785 3.5e-34 148.7 135 60.0
Lalb_Chr02g0145351 Lupinus albus HOM05D000049 ORTHO05D008785 3.5e-34 148.7 135 57.8
Cfa004569 Carpinus fangiana HOM05D000049 ORTHO05D008785 4.5e-34 148.3 138 64.5
Oeu010393.1 Olea europaea HOM05D000049 ORTHO05D008785 7.7e-34 147.5 137 64.2
Hund06332 Selenicereus undatus HOM05D000049 ORTHO05D008785 7.7e-34 147.5 137 59.9
CsaV3_7G008250 Cucumis sativus L. HOM05D000049 ORTHO05D008785 1.3e-33 146.7 137 63.5
Psat6g219680 Pisum sativum HOM05D000049 ORTHO05D008785 3.8e-33 145.2 138 60.9
Glyma.10G263000 Glycine max HOM05D000049 ORTHO05D008785 5.0e-33 144.8 135 63.7
ECA240G2980 Erigeron canadensis HOM05D000049 ORTHO05D000027 6.5e-33 144.4 135 59.3
Sc08g0001450 Simmondsia chinensis HOM05D000049 ORTHO05D008785 8.5e-33 144.1 135 60.7
FvH4_2g05321 Fragaria vesca HOM05D000049 ORTHO05D008785 1.1e-32 143.7 135 63.7
PGR042G1228 Punica granatum HOM05D000049 ORTHO05D008785 1.1e-32 143.7 138 65.2
Solyc01g107660.3 Solanum lycopersicum HOM05D000049 ORTHO05D008785 1.9e-32 142.9 136 61.0
TWI31G0015 Tripterygium wilfordii HOM05D000049 ORTHO05D008785 1.9e-32 142.9 135 62.2
Glyma.20G129600 Glycine max HOM05D000049 ORTHO05D008785 3.2e-32 142.1 135 60.7
AUR62039109 Chenopodium quinoa HOM05D000049 ORTHO05D008785 4.2e-32 141.7 135 57.8
Lj5g0006015 Lotus japonicus HOM05D000049 ORTHO05D008785 4.2e-32 141.7 136 60.3
Oeu018599.1 Olea europaea HOM05D000049 ORTHO05D008785 4.2e-32 141.7 168 54.2
AUR62010281 Chenopodium quinoa HOM05D000049 ORTHO05D008785 5.5e-32 141.4 135 57.8
ClCG02G006290 Citrullus lanatus HOM05D000049 ORTHO05D008785 5.5e-32 141.4 138 63.0
RcHm_v2.0_Chr6g0255531 Rosa chinensis HOM05D000049 ORTHO05D008785 7.2e-32 141.0 135 63.0
FAN20G0640 Fragaria x ananassa HOM05D000049 ORTHO05D008785 1.2e-31 140.2 135 62.2
PGSC0003DMG400025866 Solanum tuberosum HOM05D000049 ORTHO05D008785 1.2e-31 140.2 136 61.8
Nitab4.5_0002815g0100 Nicotiana tabacum HOM05D000049 ORTHO05D008785 4.7e-31 138.3 136 61.8
SalBow3G3686 Salvia bowleyana HOM05D000049 ORTHO05D008785 2.3e-30 136.0 134 62.7
TPR.G13867 Trifolium pratense HOM05D000049 ORTHO05D008785 2.3e-30 136.0 137 60.6
Ah.01g018130 Amaranthus hybridus HOM05D000049 ORTHO05D008785 3.0e-30 135.6 136 60.3
HanXRQChr03g0070281 Helianthus annuus HOM05D000049 ORTHO05D008785 3.0e-30 135.6 128 64.1
Nitab4.5_0005392g0020 Nicotiana tabacum HOM05D000049 ORTHO05D008785 5.2e-30 134.8 135 60.0
Migut.B00381 Erythranthe guttata HOM05D000049 ORTHO05D008785 6.7e-30 134.4 132 57.6
Peaxi162Scf00016g02238 Petunia axillaris HOM05D000049 ORTHO05D008785 6.7e-30 134.4 136 61.0
MSTRG.5347 Avicennia marina HOM05D000049 ORTHO05D008785 8.8e-30 134.0 125 57.6
CiPaw.06G170000 Carya illinoinensis HOM05D000049 ORTHO05D008785 1.2e-29 133.7 127 63.0
FAN24G0707 Fragaria x ananassa HOM05D000049 ORTHO05D008785 1.5e-29 133.3 135 59.3
THA.LOC104819560 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 2.0e-29 132.9 138 59.4
CiPaw.05G010600 Carya illinoinensis HOM05D000049 ORTHO05D008785 3.3e-29 132.1 78 87.2
AT4G34190 Arabidopsis thaliana HOM05D000049 ORTHO05D008785 7.5e-29 131.0 141 56.0
Migut.N01171 Erythranthe guttata HOM05D000049 ORTHO05D008785 7.5e-29 131.0 135 56.3
SGA_v2.0_scaffold393G50708 Striga asiatica HOM05D000049 ORTHO05D008785 9.7e-29 130.6 135 56.3
Medtr1g107490 Medicago truncatula HOM05D000049 ORTHO05D008785 1.3e-28 130.2 131 58.0
AL7G17120 Arabidopsis lyrata HOM05D000049 ORTHO05D008785 2.2e-28 129.4 136 58.1
CAN.G1231.12 Capsicum annuum HOM05D000049 ORTHO05D008785 2.2e-28 129.4 136 58.8
FAN15G1433 Fragaria x ananassa HOM05D000049 ORTHO05D008785 3.7e-28 128.6 135 57.0
Aa31LG2G16660 Aethionema arabicum HOM05D000049 ORTHO05D008785 4.8e-28 128.3 143 55.2
arahy.Tifrunner.gnm1.ann1.KJA62A Arachis hypogaea HOM05D000049 ORTHO05D008785 1.1e-27 127.1 83 79.5
PSO210G6109 Papaver somniferum HOM05D000049 ORTHO05D008785 1.4e-27 126.7 138 56.5
Sed0018040 Sechium edule HOM05D000049 ORTHO05D008785 1.4e-27 126.7 138 56.5
PSO170G1282 Papaver somniferum HOM05D000049 ORTHO05D008785 1.8e-27 126.3 143 56.6
CDE02G2484 Ceratophyllum demersum HOM05D000049 ORTHO05D008785 2.4e-27 125.9 102 67.6
arahy.Tifrunner.gnm1.ann1.MU25MQ Arachis hypogaea HOM05D000049 ORTHO05D008785 3.1e-27 125.6 83 79.5
Carub.0007s0619 Capsella rubella HOM05D000049 ORTHO05D008785 4.1e-27 125.2 143 53.1
CARHR242610 Cardamine hirsuta HOM05D000049 ORTHO05D008785 9.1e-27 124.0 147 53.1
vmacro19520 Vaccinium macrocarpon HOM05D000049 ORTHO05D008785 2.0e-26 122.9 113 58.4
BcaNung03801 Brassica carinata HOM05D000049 ORTHO05D008785 2.7e-26 122.5 139 56.8
TAR376G0829 Trochodendron aralioides HOM05D000049 ORTHO05D008785 2.7e-26 122.5 87 70.1
A01p04250 Brassica napus HOM05D000049 ORTHO05D008785 3.5e-26 122.1 139 55.4
C01p04640 Brassica napus HOM05D000049 ORTHO05D008785 3.5e-26 122.1 139 56.8
BolC1t00447H Brassica oleracea HOM05D000049 ORTHO05D008785 3.5e-26 122.1 139 56.8
BraA01t00414Z Brassica rapa HOM05D000049 ORTHO05D008785 3.5e-26 122.1 139 55.4
Thhalv10026482m.g Eutrema salsugineum HOM05D000049 ORTHO05D008785 1.0e-25 120.6 150 53.3
DCAR_030806 Daucus carota HOM05D000049 ORTHO05D008785 3.8e-25 118.6 82 73.2
unitig_22.g6845 Utricularia gibba HOM05D000049 ORTHO05D008785 5.0e-25 118.2 91 70.3
Sabra09G0074400 Salix brachista HOM05D000049 ORTHO05D008785 8.5e-25 117.5 131 54.2
MELO3C018482.2 Cucumis melo HOM05D000049 ORTHO05D000027 1.5e-24 116.7 78 80.8
Sp7g31960 Schrenkiella parvula HOM05D000049 ORTHO05D008785 1.5e-24 116.7 138 53.6
THA.LOC104807247 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 1.5e-24 116.7 97 64.9
HPP92_004768 Vanilla planifolia HOM05D000049 ORTHO05D008785 1.5e-24 116.7 139 51.1
Hund00143 Selenicereus undatus HOM05D000049 ORTHO05D008785 1.4e-22 110.2 78 74.4
SEGI_21574 Sequoiadendron giganteum HOM05D000049 ORTHO05D008785 2.6e-21 105.9 91 61.5
TAR628G1275 Trochodendron aralioides HOM05D000049 ORTHO05D008785 2.0e-18 96.3 77 62.3
FAN27G0752 Fragaria x ananassa HOM05D000049 ORTHO05D000027 2.5e-16 89.4 110 52.7
Zm00001eb048670 Zea mays HOM05D000049 ORTHO05D008785 9.5e-16 87.4 76 56.6
Pp3c1_21810 Physcomitrium patens HOM05D000049 ORTHO05D008785 8.0e-15 84.3 92 48.9
Mapoly0006s0145 Marchantia polymorpha HOM05D000049 ORTHO05D008785 2.3e-14 82.8 81 58.0
Os11g0621400 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 1.7e-12 76.6 89 47.2
AagrBONN_evm.TU.Sc2ySwM_117.2783 Anthoceros agrestis HOM05D000049 ORTHO05D008785 2.4e-11 72.8 71 50.7
SalBow6G4602 Salvia bowleyana HOM05D010989 ORTHO05D013112 2.4e-11 72.8 106 51.9
SMO340G0196 Selaginella moellendorffii HOM05D000049 ORTHO05D008785 2.4e-11 72.8 70 51.4
ATR0691G295 Amborella trichopoda HOM05D000049 ORTHO05D008785 2.7e-10 69.3 46 78.3
COL.COLO4_15744 Corchorus olitorius HOM05D001416 ORTHO05D002549 9.5e-08 60.8 32 90.6
Os10g0395200 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 6.8e-06 54.7 52 51.9


User provided reference genes

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