Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42099 Davidia involucrata HOM05D001401 ORTHO05D006368 5.7e-143 511.1 307 100.0
Dinv23564 Davidia involucrata HOM05D001401 ORTHO05D006368 4.9e-110 401.7 307 83.1
Hma1.2p1_0584F.1_g183440 Hydrangea macrophylla HOM05D001401 ORTHO05D006368 1.5e-103 380.2 308 67.2
CSS0017552 Camellia sinensis var. sinensis HOM05D001401 ORTHO05D006368 7.1e-93 344.7 312 74.7
Actinidia27915 Actinidia chinensis HOM05D001401 ORTHO05D006368 1.5e-87 327.0 318 63.5
vmacro02151 Vaccinium macrocarpon HOM05D001401 ORTHO05D006368 3.8e-86 322.4 307 59.9
TAR628G1386 Trochodendron aralioides HOM05D001401 ORTHO05D006368 2.3e-83 313.2 307 59.0
Rhsim11G0172600 Rhododendron simsii HOM05D000554 ORTHO05D002829 3.0e-83 312.8 350 53.4
TAR381G0019 Trochodendron aralioides HOM05D001401 ORTHO05D006368 1.3e-78 297.4 308 56.5
Haze_02430 Corylus avellana HOM05D001401 ORTHO05D006368 5.5e-77 292.0 307 58.3
QL11p037824 Quercus lobata HOM05D001401 ORTHO05D006368 3.0e-75 286.2 335 49.6
CiPaw.05G060100 Carya illinoinensis HOM05D001401 ORTHO05D006368 9.6e-74 281.2 310 54.8
DCAR_029001 Daucus carota HOM05D001401 ORTHO05D006368 1.3e-73 280.8 308 53.6
Thecc.02G031200 Theobroma cacao HOM05D001401 ORTHO05D006368 1.8e-72 276.9 329 52.0
Actinidia00491 Actinidia chinensis HOM05D001401 ORTHO05D006368 2.4e-72 276.6 311 56.9
Nitab4.5_0003816g0020 Nicotiana tabacum HOM05D001401 ORTHO05D006368 9.0e-72 274.6 307 51.5
Prupe.8G107000 Prunus persica HOM05D001401 ORTHO05D006368 1.5e-71 273.9 308 60.1
QL11p040047 Quercus lobata HOM05D001401 ORTHO05D006368 4.5e-71 272.3 214 64.5
Cfa021516 Carpinus fangiana HOM05D001401 ORTHO05D006368 2.9e-70 269.6 215 65.1
Ciclev10028944m.g Citrus clementina HOM05D001401 ORTHO05D006368 6.5e-70 268.5 309 50.2
Nitab4.5_0004280g0010 Nicotiana tabacum HOM05D001401 ORTHO05D006368 8.5e-70 268.1 319 51.4
Cc02_g18020 Coffea canephora HOM05D001401 ORTHO05D006368 1.4e-69 267.3 307 52.8
Oeu034083.1 Olea europaea HOM05D001401 ORTHO05D006368 3.2e-69 266.2 308 52.3
Lj9P365T45 Lonicera japonica HOM05D001401 ORTHO05D006368 7.2e-69 265.0 216 68.5
Manes.15G147100 Manihot esculenta HOM05D001401 ORTHO05D006368 9.3e-69 264.6 325 49.8
Aqoxy6G00969 Aquilegia oxysepala HOM05D001401 ORTHO05D006368 7.9e-68 261.5 307 48.2
SalBow6G2648 Salvia bowleyana HOM05D001401 ORTHO05D006368 7.9e-68 261.5 308 53.6
MSTRG.20113 Avicennia marina HOM05D001401 ORTHO05D006368 1.0e-67 261.2 309 49.2
VMungo1127G1180 Vigna mungo HOM05D001401 ORTHO05D006368 1.0e-67 261.2 317 48.3
Duzib132G0928 Durio zibethinus HOM05D001401 ORTHO05D006368 2.3e-67 260.0 325 50.5
Hund06213 Selenicereus undatus HOM05D001401 ORTHO05D006368 3.0e-67 259.6 307 50.5
Nn5g29458 Nelumbo nucifera HOM05D001401 ORTHO05D006368 6.7e-67 258.5 314 50.6
CANSAT25G1485 Cannabis sativa HOM05D001401 ORTHO05D006368 8.7e-67 258.1 307 56.7
Potri.004G149900 Populus trichocarpa HOM05D001401 ORTHO05D006368 1.9e-66 256.9 328 48.5
Peaxi162Scf00016g01140 Petunia axillaris HOM05D001401 ORTHO05D006368 2.5e-66 256.5 308 50.3
TPR.G28096 Trifolium pratense HOM05D001401 ORTHO05D006368 3.3e-66 256.1 310 57.4
MD05G1071000 Malus domestica HOM05D001401 ORTHO05D006368 7.4e-66 255.0 307 52.4
Medtr4g068880 Medicago truncatula HOM05D001401 ORTHO05D006368 9.7e-66 254.6 311 52.1
PGSC0003DMG400025176 Solanum tuberosum HOM05D001401 ORTHO05D006368 9.7e-66 254.6 307 50.5
MSTRG.5386 Avicennia marina HOM05D001401 ORTHO05D006368 1.3e-65 254.2 309 52.1
Cfa021524 Carpinus fangiana HOM05D001401 ORTHO05D002222 1.6e-65 253.8 208 63.9
Glyma.11G121600 Glycine max HOM05D001401 ORTHO05D006368 1.6e-65 253.8 312 49.4
Solyc01g109260.3 Solanum lycopersicum HOM05D001401 ORTHO05D006368 2.2e-65 253.4 307 49.8
Lj3g0025450 Lotus japonicus HOM05D001401 ORTHO05D006368 2.8e-65 253.1 316 46.5
Sopen01g051420 Solanum pennellii HOM05D001401 ORTHO05D006368 2.8e-65 253.1 307 49.8
Manes.17G098401 Manihot esculenta HOM05D001401 ORTHO05D006368 6.3e-65 251.9 325 50.2
Psat7g205720 Pisum sativum HOM05D001401 ORTHO05D006368 6.3e-65 251.9 309 48.5
RcHm_v2.0_Chr6g0262181 Rosa chinensis HOM05D001401 ORTHO05D006368 8.2e-65 251.5 314 48.1
Glyma.12G046700 Glycine max HOM05D001401 ORTHO05D006368 1.4e-64 250.8 311 46.6
Phvul.011G048500 Phaseolus vulgaris HOM05D001401 ORTHO05D006368 1.4e-64 250.8 315 46.0
arahy.Tifrunner.gnm1.ann1.U2ETAV Arachis hypogaea HOM05D001401 ORTHO05D006368 2.4e-64 250.0 317 45.4
CAN.G322.101 Capsicum annuum HOM05D001401 ORTHO05D006368 6.9e-64 248.4 308 49.0
Ca_20836_v3 Cicer arietinum L. HOM05D001401 ORTHO05D006368 6.9e-64 248.4 308 47.7
Potri.009G111000 Populus trichocarpa HOM05D001401 ORTHO05D006368 6.9e-64 248.4 325 47.7
AUR62011378 Chenopodium quinoa HOM05D001401 ORTHO05D006368 3.4e-63 246.1 307 46.9
FAN20G2914 Fragaria x ananassa HOM05D001401 ORTHO05D006368 3.4e-63 246.1 308 47.7
Duzib248G1632 Durio zibethinus HOM05D001401 ORTHO05D006368 4.5e-63 245.7 341 43.7
TWI31G0569 Tripterygium wilfordii HOM05D001401 ORTHO05D002222 4.5e-63 245.7 317 49.8
Cpa.g.sc62.97 Carica papaya HOM05D001401 ORTHO05D006368 7.7e-63 245.0 325 49.8
ClCG09G017860 Citrullus lanatus HOM05D001401 ORTHO05D006368 1.0e-62 244.6 311 54.3
Gohir.A01G181100 Gossypium hirsutum HOM05D001401 ORTHO05D006368 1.0e-62 244.6 316 46.5
AUR62016681 Chenopodium quinoa HOM05D001401 ORTHO05D006368 2.2e-62 243.4 307 46.9
TWI75G1696 Tripterygium wilfordii HOM05D001401 ORTHO05D006368 2.2e-62 243.4 312 50.6
Lsat_1_v5_gn_5_118161 Lactuca sativa HOM05D001401 ORTHO05D006368 5.0e-62 242.3 311 49.5
MELO3C021952.2 Cucumis melo HOM05D001401 ORTHO05D002222 1.1e-61 241.1 306 46.1
Gohir.D01G172200 Gossypium hirsutum HOM05D001401 ORTHO05D006368 1.1e-61 241.1 316 45.9
PSO170G2675 Papaver somniferum HOM05D001401 ORTHO05D006368 1.1e-61 241.1 308 49.0
Eucgr.I01238 Eucalyptus grandis HOM05D001401 ORTHO05D006368 1.4e-61 240.7 307 59.6
Gorai.002G213800 Gossypium raimondii HOM05D001401 ORTHO05D006368 1.9e-61 240.4 316 45.6
PSO700G0268 Papaver somniferum HOM05D001401 ORTHO05D006368 1.9e-61 240.4 308 49.0
Medtr0026s0200 Medicago truncatula HOM05D001401 ORTHO05D006368 5.5e-61 238.8 221 57.0
Lalb_Chr01g0002831 Lupinus albus HOM05D001401 ORTHO05D006368 7.2e-61 238.4 316 45.9
TWI79G1069 Tripterygium wilfordii HOM05D001401 ORTHO05D002222 7.2e-61 238.4 311 54.0
FAN24G0528 Fragaria x ananassa HOM05D001401 ORTHO05D006368 9.4e-61 238.0 307 55.7
CsaV3_2G014470 Cucumis sativus L. HOM05D001401 ORTHO05D006368 1.2e-60 237.7 308 46.1
COL.COLO4_17797 Corchorus olitorius HOM05D000370 ORTHO05D001335 2.7e-60 236.5 215 58.6
FvH4_2g07780 Fragaria vesca HOM05D001401 ORTHO05D006368 7.9e-60 235.0 307 55.0
ECA234G2696 Erigeron canadensis HOM05D000324 ORTHO05D001014 1.4e-59 234.2 304 48.0
Sabra09G0084600 Salix brachista HOM05D001401 ORTHO05D006368 1.4e-59 234.2 323 47.4
Migut.N01216 Erythranthe guttata HOM05D001401 ORTHO05D006368 3.9e-59 232.6 311 47.9
Atru.chr5.2919 Acer truncatum HOM05D001401 ORTHO05D006368 5.1e-59 232.3 308 49.7
Sabra04G0099700 Salix brachista HOM05D001401 ORTHO05D006368 6.7e-59 231.9 365 43.0
Sed0001686 Sechium edule HOM05D001401 ORTHO05D006368 6.7e-59 231.9 312 45.8
Hund00301 Selenicereus undatus HOM05D001401 ORTHO05D006368 5.7e-58 228.8 308 44.2
Lalb_Chr03g0025871 Lupinus albus HOM05D001401 ORTHO05D006368 9.7e-58 228.0 314 46.2
Sc08g0000270 Simmondsia chinensis HOM05D001401 ORTHO05D006368 2.8e-57 226.5 308 45.8
AT2G16070 Arabidopsis thaliana HOM05D001401 ORTHO05D006368 1.8e-56 223.8 317 44.5
FAN15G1840 Fragaria x ananassa HOM05D001401 ORTHO05D006368 4.1e-56 222.6 214 56.1
PSO675G0936 Papaver somniferum HOM05D001401 ORTHO05D006368 9.1e-56 221.5 310 45.2
PSO541G5534 Papaver somniferum HOM05D001401 ORTHO05D006368 1.5e-55 220.7 310 45.2
HanXRQChr10g0307141 Helianthus annuus HOM05D001401 ORTHO05D006368 4.5e-55 219.2 309 46.6
THA.LOC104807334 Tarenaya hassleriana HOM05D001401 ORTHO05D006368 4.5e-55 219.2 323 42.1
Ah.01g006390 Amaranthus hybridus HOM05D001401 ORTHO05D006368 7.7e-55 218.4 309 43.7
Oeu027593.1 Olea europaea HOM05D001574 ORTHO05D006368 7.7e-55 218.4 281 47.7
Sed0023769 Sechium edule HOM05D001401 ORTHO05D006368 1.1e-53 214.5 310 45.5
Carub.0003s2988 Capsella rubella HOM05D001401 ORTHO05D006368 3.2e-53 213.0 320 42.5
Hund00294 Selenicereus undatus HOM05D001401 ORTHO05D006368 4.2e-53 212.6 300 43.0
Migut.B00279 Erythranthe guttata HOM05D001401 ORTHO05D006368 2.6e-50 203.4 313 46.0
MELO3C018410.2 Cucumis melo HOM05D001401 ORTHO05D006368 1.7e-49 200.7 215 50.2
Sp3g29340 Schrenkiella parvula HOM05D001401 ORTHO05D006368 1.7e-49 200.7 319 40.1
PGR042G1488 Punica granatum HOM05D001401 ORTHO05D006368 2.2e-49 200.3 309 51.1
CARHR106370 Cardamine hirsuta HOM05D001401 ORTHO05D006368 3.7e-49 199.5 326 39.6
MBI16_g36202_MAGBIO Magnolia biondii HOM05D001401 ORTHO05D002222 3.7e-49 199.5 212 57.1
ATR0733G254 Amborella trichopoda HOM05D001401 ORTHO05D006368 6.3e-49 198.7 322 40.4
Thhalv10022794m.g Eutrema salsugineum HOM05D001401 ORTHO05D006368 8.2e-49 198.4 317 43.2
A07p04770 Brassica napus HOM05D001401 ORTHO05D006368 1.1e-48 198.0 312 42.9
BraA07t28264Z Brassica rapa HOM05D001401 ORTHO05D006368 1.1e-48 198.0 312 42.9
Aa31LG8G13520 Aethionema arabicum HOM05D001401 ORTHO05D006368 5.3e-48 195.7 308 41.2
CsaV3_7G010190 Cucumis sativus L. HOM05D001401 ORTHO05D006368 5.3e-48 195.7 311 43.7
C07p07640 Brassica napus HOM05D001401 ORTHO05D006368 1.6e-47 194.1 313 45.4
BolC7t41185H Brassica oleracea HOM05D001401 ORTHO05D006368 1.6e-47 194.1 313 45.4
ClCG02G005370 Citrullus lanatus HOM05D001401 ORTHO05D006368 2.0e-47 193.7 312 43.3
BcaC01g03041 Brassica carinata HOM05D001401 ORTHO05D006368 2.9e-46 189.9 321 40.8
C03p56790 Brassica napus HOM05D001401 ORTHO05D006368 2.9e-46 189.9 321 40.8
BolC3t17961H Brassica oleracea HOM05D001401 ORTHO05D006368 2.9e-46 189.9 321 40.8
EL10Ac9g21774 Beta vulgaris HOM05D001401 ORTHO05D002222 3.8e-46 189.5 278 53.2
Sed0001319 Sechium edule HOM05D001401 ORTHO05D006368 1.9e-45 187.2 307 37.8
BcaB08g34633 Brassica carinata HOM05D001401 ORTHO05D006368 7.2e-45 185.3 316 41.5
CDE01G0160 Ceratophyllum demersum HOM05D001401 ORTHO05D006368 2.1e-44 183.7 312 42.3
A03p45690 Brassica napus HOM05D001401 ORTHO05D006368 5.2e-43 179.1 309 43.0
BraA03t13701Z Brassica rapa HOM05D001401 ORTHO05D006368 5.2e-43 179.1 309 43.0
BcaC06g36113 Brassica carinata HOM05D001401 ORTHO05D006368 5.7e-42 175.6 311 43.1
Os07g0123300 Oryza sativa ssp. japonica HOM05D001401 ORTHO05D006368 5.7e-42 175.6 216 44.4
Ah.01g019700 Amaranthus hybridus HOM05D001401 ORTHO05D002222 9.7e-42 174.9 364 36.0
SGA_v2.0_scaffold58G20583 Striga asiatica HOM05D001401 ORTHO05D006368 3.5e-39 166.4 309 40.1
THA.LOC104820173 Tarenaya hassleriana HOM05D001401 ORTHO05D006368 5.9e-39 165.6 319 35.4
CDE04G2456 Ceratophyllum demersum HOM05D001401 ORTHO05D006368 2.9e-38 163.3 309 36.9
A09p10890 Brassica napus HOM05D001401 ORTHO05D006368 1.1e-37 161.4 313 38.3
GSVIVG01031902001 Vitis vinifera HOM05D001401 ORTHO05D006368 2.1e-36 157.1 175 60.0
Lj1C312T0 Lonicera japonica HOM05D001401 ORTHO05D006368 9.1e-32 141.7 132 61.4
SEGI_00142 Sequoiadendron giganteum HOM05D001401 ORTHO05D006368 1.6e-31 141.0 319 35.1
Zm00001eb299190 Zea mays HOM05D001401 ORTHO05D006368 3.2e-29 133.3 331 34.7
Nn1g05138 Nelumbo nucifera HOM05D001401 ORTHO05D006368 3.6e-28 129.8 168 50.0
TAR623G1717 Trochodendron aralioides HOM05D001401 ORTHO05D006368 8.0e-28 128.6 92 72.8
C09p12860 Brassica napus HOM05D001401 ORTHO05D006368 1.9e-21 107.5 308 33.8
BolC9t54175H Brassica oleracea HOM05D001401 ORTHO05D006368 1.9e-21 107.5 308 33.8
Mapoly0001s0328 Marchantia polymorpha HOM05D001401 ORTHO05D006368 2.1e-20 104.0 364 28.6
BcaNung01772 Brassica carinata HOM05D001401 ORTHO05D006368 5.2e-19 99.4 189 43.4
BraA09t36729Z Brassica rapa HOM05D001401 ORTHO05D006368 6.8e-19 99.0 162 40.1
CDE02G3784 Ceratophyllum demersum HOM05D001401 ORTHO05D002222 1.7e-17 94.4 106 49.1
BcaB07g31630 Brassica carinata HOM05D006912 ORTHO05D008686 9.2e-16 88.6 158 36.7
Pp3c1_32220 Physcomitrium patens HOM05D001401 ORTHO05D006368 8.6e-14 82.0 351 27.4
Pp3c2_5300 Physcomitrium patens HOM05D001401 ORTHO05D006368 2.5e-13 80.5 358 24.9
SalBow1G1061 Salvia bowleyana HOM05D001999 ORTHO05D001994 3.3e-13 80.1 54 79.6
SEGI_14403 Sequoiadendron giganteum HOM05D001401 ORTHO05D006368 1.6e-12 77.8 351 26.8
Pp3c19_14090 Physcomitrium patens HOM05D001401 ORTHO05D006368 3.6e-12 76.6 378 24.9
Pp3c22_17090 Physcomitrium patens HOM05D001401 ORTHO05D006368 6.2e-12 75.9 382 23.3
Pp3c17_18860 Physcomitrium patens HOM05D001401 ORTHO05D006368 1.4e-11 74.7 354 26.6
unitig_21.g20770 Utricularia gibba HOM05D000370 ORTHO05D001335 8.9e-11 72.0 303 27.4
BcaC04g23035 Brassica carinata HOM05D001401 ORTHO05D006368 6.4e-09 65.9 87 50.6
AagrBONN_evm.TU.Sc2ySwM_228.2503 Anthoceros agrestis HOM05D001401 ORTHO05D006368 1.4e-08 64.7 322 25.2
FAN15G1877 Fragaria x ananassa HOM05D001401 ORTHO05D006368 1.7e-06 57.8 40 70.0


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