Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42018 Davidia involucrata HOM05D007387 ORTHO05D009321 2.0e-66 255.8 139 100.0
Actinidia11742 Actinidia chinensis HOM05D007387 ORTHO05D009321 3.4e-26 122.1 128 55.5
Actinidia00563 Actinidia chinensis HOM05D001785 ORTHO05D001933 9.9e-26 120.6 135 54.1
vmacro02067 Vaccinium macrocarpon HOM05D007387 ORTHO05D009321 2.7e-23 112.5 61 82.0
Nitab4.5_0002723g0090 Nicotiana tabacum HOM05D005703 ORTHO05D006643 6.0e-23 111.3 64 78.1
Nitab4.5_0011132g0020 Nicotiana tabacum HOM05D005703 ORTHO05D006643 1.7e-22 109.8 65 76.9
HanXRQChr04g0127721 Helianthus annuus HOM05D007387 ORTHO05D009321 1.9e-21 106.3 158 43.7
ECA236G2541 Erigeron canadensis HOM05D007387 ORTHO05D009321 2.1e-20 102.8 63 71.4
Cpa.g.sc139.28 Carica papaya HOM05D007387 ORTHO05D009321 2.8e-20 102.4 62 72.6
HanXRQChr16g0505141 Helianthus annuus HOM05D007387 ORTHO05D009321 2.8e-20 102.4 138 52.9
Lsat_1_v5_gn_7_91901 Lactuca sativa HOM05D007387 ORTHO05D009321 3.6e-20 102.1 144 46.5
Gohir.A04G124100 Gossypium hirsutum HOM05D007387 ORTHO05D009321 6.2e-20 101.3 63 74.6
Gohir.D04G166200 Gossypium hirsutum HOM05D007387 ORTHO05D009321 2.4e-19 99.4 63 73.0
Gorai.012G154600 Gossypium raimondii HOM05D007387 ORTHO05D009321 2.4e-19 99.4 63 73.0
Cc02_g17100 Coffea canephora HOM05D007387 ORTHO05D009321 5.2e-19 98.2 65 70.8
Atru.chr5.3107 Acer truncatum HOM05D007387 ORTHO05D009321 1.2e-18 97.1 61 70.5
PGSC0003DMG400030970 Solanum tuberosum HOM05D007387 ORTHO05D009321 1.5e-18 96.7 58 70.7
Prupe.8G088200 Prunus persica HOM05D007387 ORTHO05D009321 2.0e-18 96.3 58 75.9
Duzib132G0100 Durio zibethinus HOM05D007387 ORTHO05D009321 3.4e-18 95.5 59 71.2
RcHm_v2.0_Chr6g0266971 Rosa chinensis HOM05D007387 ORTHO05D009321 3.4e-18 95.5 58 75.9
arahy.Tifrunner.gnm1.ann1.WH0Y0U Arachis hypogaea HOM05D007387 ORTHO05D009321 4.4e-18 95.1 59 76.3
MD10G1066200 Malus domestica HOM05D007387 ORTHO05D009321 4.4e-18 95.1 60 75.0
Oeu008575.1 Olea europaea HOM05D007387 ORTHO05D009321 4.4e-18 95.1 64 65.6
Peaxi162Scf00003g00073 Petunia axillaris HOM05D007387 ORTHO05D009321 5.8e-18 94.7 57 71.9
Solyc01g110150.2 Solanum lycopersicum HOM05D007387 ORTHO05D009321 7.6e-18 94.4 58 69.0
FAN24G0663 Fragaria x ananassa HOM05D007387 ORTHO05D009321 9.9e-18 94.0 60 73.3
Hma1.2p1_0066F.1_g035940 Hydrangea macrophylla HOM05D007387 ORTHO05D009321 2.2e-17 92.8 120 58.3
MD05G1058600 Malus domestica HOM05D007387 ORTHO05D009321 2.2e-17 92.8 58 74.1
Thecc.02G078400 Theobroma cacao HOM05D007387 ORTHO05D009321 2.2e-17 92.8 57 70.2
VMungo1127G0459 Vigna mungo HOM05D007387 ORTHO05D009321 2.2e-17 92.8 58 72.4
FvH4_2g10040 Fragaria vesca HOM05D007387 ORTHO05D009321 2.9e-17 92.4 60 71.7
Phvul.011G041100 Phaseolus vulgaris HOM05D007387 ORTHO05D009321 2.9e-17 92.4 60 70.0
ClCG02G004690 Citrullus lanatus HOM05D007387 ORTHO05D009321 3.8e-17 92.0 59 69.5
MELO3C013435.2 Cucumis melo HOM05D007387 ORTHO05D009321 3.8e-17 92.0 59 69.5
CsaV3_7G000220 Cucumis sativus L. HOM05D007387 ORTHO05D009321 3.8e-17 92.0 59 69.5
Glyma.12G039000 Glycine max HOM05D007387 ORTHO05D009321 6.4e-17 91.3 58 72.4
QL11p045571 Quercus lobata HOM05D007387 ORTHO05D009321 6.4e-17 91.3 60 68.3
Ca_20916_v3 Cicer arietinum L. HOM05D007387 ORTHO05D009321 8.4e-17 90.9 58 70.7
Eucgr.I01309 Eucalyptus grandis HOM05D007387 ORTHO05D009321 8.4e-17 90.9 58 69.0
FAN27G1365 Fragaria x ananassa HOM05D007387 ORTHO05D009321 8.4e-17 90.9 60 70.0
Actinidia12738 Actinidia chinensis HOM05D007387 ORTHO05D009321 1.4e-16 90.1 59 74.6
Actinidia27864 Actinidia chinensis HOM05D007387 ORTHO05D009321 1.4e-16 90.1 59 74.6
FAN15G3112 Fragaria x ananassa HOM05D007387 ORTHO05D009321 1.4e-16 90.1 60 70.0
Sabra04G0107500 Salix brachista HOM05D007387 ORTHO05D009321 2.4e-16 89.4 59 69.5
Sopen01g052310 Solanum pennellii HOM05D007387 ORTHO05D009321 2.4e-16 89.4 55 69.1
Glyma.11G113100 Glycine max HOM05D007387 ORTHO05D009321 3.2e-16 89.0 58 70.7
Lalb_Chr03g0025431 Lupinus albus HOM05D007387 ORTHO05D009321 3.2e-16 89.0 56 69.6
PGR142G2532 Punica granatum HOM05D007387 ORTHO05D009321 3.2e-16 89.0 58 69.0
Sed0000236 Sechium edule HOM05D007387 ORTHO05D009321 3.2e-16 89.0 60 68.3
TWI31G1242 Tripterygium wilfordii HOM05D007387 ORTHO05D009321 5.4e-16 88.2 63 61.9
Sed0010335 Sechium edule HOM05D007387 ORTHO05D009321 7.1e-16 87.8 59 66.1
Potri.009G121700 Populus trichocarpa HOM05D007387 ORTHO05D009321 9.3e-16 87.4 59 67.8
Cfa005072 Carpinus fangiana HOM05D007387 ORTHO05D009321 1.6e-15 86.7 57 70.2
Ciclev10029309m.g Citrus clementina HOM05D007387 ORTHO05D009321 1.6e-15 86.7 57 68.4
Lj3g0012874 Lotus japonicus HOM05D007387 ORTHO05D009321 1.6e-15 86.7 58 70.7
Potri.004G160700 Populus trichocarpa HOM05D007387 ORTHO05D009321 1.6e-15 86.7 57 68.4
CAN.G170.83 Capsicum annuum HOM05D007387 ORTHO05D009321 2.1e-15 86.3 132 48.5
Gohir.A12G041900 Gossypium hirsutum HOM05D007387 ORTHO05D009321 2.1e-15 86.3 58 63.8
CANSAT11G0211 Cannabis sativa HOM05D007387 ORTHO05D009321 2.7e-15 85.9 61 67.2
Duzib248G1112 Durio zibethinus HOM05D007387 ORTHO05D009321 3.5e-15 85.5 139 45.3
Oeu055620.1 Olea europaea HOM05D007387 ORTHO05D009321 3.5e-15 85.5 70 58.6
CiPaw.06G131100 Carya illinoinensis HOM05D007387 ORTHO05D009321 4.6e-15 85.1 57 68.4
Sabra09G0094000 Salix brachista HOM05D007387 ORTHO05D009321 1.0e-14 84.0 59 66.1
Psat7g182600 Pisum sativum HOM05D007387 ORTHO05D009321 1.3e-14 83.6 56 67.9
TWI79G0383 Tripterygium wilfordii HOM05D007387 ORTHO05D009321 1.3e-14 83.6 135 41.5
Gohir.D12G030300 Gossypium hirsutum HOM05D007387 ORTHO05D009321 1.7e-14 83.2 57 63.2
Sp7g32420 Schrenkiella parvula HOM05D007387 ORTHO05D009321 2.3e-14 82.8 61 62.3
Medtr4g071120 Medicago truncatula HOM05D007387 ORTHO05D009321 6.6e-14 81.3 56 66.1
DCAR_009554 Daucus carota HOM05D007387 ORTHO05D009321 1.5e-13 80.1 60 63.3
Manes.11G087600 Manihot esculenta HOM05D007387 ORTHO05D009321 1.5e-13 80.1 57 64.9
Aa31LG2G15890 Aethionema arabicum HOM05D007387 ORTHO05D009321 1.9e-13 79.7 59 62.7
DCAR_003650 Daucus carota HOM05D007387 ORTHO05D009321 1.9e-13 79.7 141 41.8
THA.LOC104807296 Tarenaya hassleriana HOM05D007387 ORTHO05D009321 2.5e-13 79.3 55 65.5
A01p03860 Brassica napus HOM05D007387 ORTHO05D009321 4.3e-13 78.6 62 62.9
Thhalv10026183m.g Eutrema salsugineum HOM05D007387 ORTHO05D009321 4.3e-13 78.6 134 40.3
Sc18g0005240 Simmondsia chinensis HOM05D007387 ORTHO05D009321 7.3e-13 77.8 55 63.6
Lalb_Chr19g0138881 Lupinus albus HOM05D007387 ORTHO05D009321 2.1e-12 76.3 143 48.3
BcaNung04919 Brassica carinata HOM05D007387 ORTHO05D009321 2.8e-12 75.9 62 59.7
TPR.G30501 Trifolium pratense HOM05D000711 ORTHO05D000545 2.8e-12 75.9 69 53.6
BcaNung04916 Brassica carinata HOM05D007387 ORTHO05D009321 4.8e-12 75.1 62 59.7
AL7G16570 Arabidopsis lyrata HOM05D007387 ORTHO05D009321 6.2e-12 74.7 62 58.1
arahy.Tifrunner.gnm1.ann1.TWZZ0X Arachis hypogaea HOM05D007387 ORTHO05D009321 6.2e-12 74.7 48 75.0
Carub.0007s0565 Capsella rubella HOM05D007387 ORTHO05D009321 1.4e-11 73.6 91 46.2
TWI75G1034 Tripterygium wilfordii HOM05D007387 ORTHO05D009321 1.4e-11 73.6 53 60.4
Migut.B00194 Erythranthe guttata HOM05D007387 ORTHO05D009321 6.9e-11 71.2 53 56.6
BcaNung00681 Brassica carinata HOM05D007387 ORTHO05D009321 1.5e-10 70.1 62 61.3
C01p04170 Brassica napus HOM05D007387 ORTHO05D009321 1.5e-10 70.1 62 61.3
BolC1t00405H Brassica oleracea HOM05D007387 ORTHO05D009321 1.5e-10 70.1 62 61.3
BraA01t00373Z Brassica rapa HOM05D007387 ORTHO05D009321 1.5e-10 70.1 62 61.3
Rhsim05G0069800 Rhododendron simsii HOM05D007387 ORTHO05D009321 2.0e-10 69.7 121 38.8
CARHR106690 Cardamine hirsuta HOM05D007387 ORTHO05D009321 1.7e-09 66.6 57 52.6
Ah.01g018920 Amaranthus hybridus HOM05D001785 ORTHO05D001933 4.9e-09 65.1 59 49.2
Peaxi162Scf00016g00025 Petunia axillaris HOM05D007387 ORTHO05D009321 8.4e-09 64.3 51 66.7
CARHR242940 Cardamine hirsuta HOM05D007387 ORTHO05D009321 1.4e-08 63.5 131 41.2
FAN15G0178 Fragaria x ananassa HOM05D007387 ORTHO05D009321 1.4e-08 63.5 91 42.9
AL3G52630 Arabidopsis lyrata HOM05D007387 ORTHO05D009321 4.2e-08 62.0 59 54.2
FAN21G1657 Fragaria x ananassa HOM05D007387 ORTHO05D009321 1.6e-07 60.1 48 58.3
Haze_02310 Corylus avellana HOM05D007387 ORTHO05D009321 2.7e-07 59.3 41 70.7
EL10Ac9g21673 Beta vulgaris HOM05D007387 ORTHO05D009321 3.5e-07 58.9 58 53.4
FAN25G2925 Fragaria x ananassa HOM05D007387 ORTHO05D009321 6.0e-07 58.2 47 59.6
AT4G34630 Arabidopsis thaliana HOM05D007387 ORTHO05D009321 7.9e-07 57.8 50 58.0


User provided reference genes

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