Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41983 Davidia involucrata HOM05D005996 ORTHO05D007507 0.0e+00 1590.1 1086 100.0
Dinv04976 Davidia involucrata HOM05D005996 ORTHO05D007507 0.0e+00 1158.3 1058 78.7
Actinidia32089 Actinidia chinensis HOM05D005996 ORTHO05D007507 2.2e-245 853.2 1050 69.9
GSVIVG01024119001 Vitis vinifera HOM05D005996 ORTHO05D007507 6.4e-229 798.5 989 70.0
QL11p046997 Quercus lobata HOM05D005996 ORTHO05D007507 4.7e-224 782.3 1049 67.4
Rhsim05G0064300 Rhododendron simsii HOM05D005996 ORTHO05D007507 8.0e-224 781.6 1107 59.8
Haze_02211 Corylus avellana HOM05D005996 ORTHO05D007507 4.9e-221 772.3 1051 66.9
Cfa005165 Carpinus fangiana HOM05D005996 ORTHO05D007507 2.5e-217 760.0 1051 66.7
vmacro17393 Vaccinium macrocarpon HOM05D005996 ORTHO05D007507 1.1e-201 708.0 1110 57.6
TWI75G0427 Tripterygium wilfordii HOM05D005996 ORTHO05D007507 2.5e-201 706.8 1045 62.5
Thecc.02G069400 Theobroma cacao HOM05D005996 ORTHO05D007507 5.2e-199 699.1 1008 65.7
CiPaw.06G125900 Carya illinoinensis HOM05D005996 ORTHO05D007507 6.9e-199 698.7 1077 56.8
Lj5C186G10 Lonicera japonica HOM05D005996 ORTHO05D007507 5.4e-188 662.5 1018 66.1
Duzib052G0584 Durio zibethinus HOM05D005996 ORTHO05D007507 7.1e-188 662.1 1054 63.0
Cc02_g16690 Coffea canephora HOM05D005996 ORTHO05D007507 9.3e-188 661.8 1054 58.6
Potri.004G166600 Populus trichocarpa HOM05D005996 ORTHO05D007507 5.1e-186 656.0 1061 61.9
Manes.11G088413 Manihot esculenta HOM05D005996 ORTHO05D007507 5.6e-185 652.5 1055 57.2
Oeu046116.1 Olea europaea HOM05D005996 ORTHO05D007507 3.1e-183 646.7 1033 58.7
Manes.11G088257 Manihot esculenta HOM05D005996 ORTHO05D007507 6.9e-183 645.6 1062 56.8
Sabra04G0111800 Salix brachista HOM05D005996 ORTHO05D007507 1.1e-180 638.3 1100 50.3
Nitab4.5_0000283g0180 Nicotiana tabacum HOM05D005996 ORTHO05D007507 1.6e-179 634.4 1062 61.0
Cpa.g.sc37.207 Carica papaya HOM05D005996 ORTHO05D007507 2.2e-173 614.0 1056 55.6
Nn5g29328 Nelumbo nucifera HOM05D005996 ORTHO05D007507 4.9e-173 612.8 1061 61.5
MD05G1113900 Malus domestica HOM05D005996 ORTHO05D007507 1.1e-172 611.7 1055 61.0
MSTRG.16865 Avicennia marina HOM05D005996 ORTHO05D007507 1.4e-172 611.3 1050 62.1
ClCG11G003680 Citrullus lanatus HOM05D005996 ORTHO05D007507 1.9e-169 600.9 1058 58.4
Peaxi162Scf00362g01048 Petunia axillaris HOM05D005996 ORTHO05D007507 1.3e-168 598.2 1060 61.0
RcHm_v2.0_Chr6g0245931 Rosa chinensis HOM05D005996 ORTHO05D007507 1.3e-168 598.2 1062 60.7
CANSAT25G2790 Cannabis sativa HOM05D005996 ORTHO05D007507 8.2e-168 595.5 1054 61.0
CsaV3_2G015630 Cucumis sativus L. HOM05D005996 ORTHO05D007507 8.2e-168 595.5 1056 58.5
FAN24G2882 Fragaria x ananassa HOM05D005996 ORTHO05D007507 1.5e-166 591.3 1059 59.8
DCAR_022928 Daucus carota HOM05D005996 ORTHO05D007507 2.0e-166 590.9 1065 57.2
FvH4_2g02240 Fragaria vesca HOM05D005996 ORTHO05D007507 2.2e-165 587.4 1059 58.6
Gohir.D13G094700 Gossypium hirsutum HOM05D005996 ORTHO05D007507 2.3e-162 577.4 1055 60.5
Gorai.001G246900 Gossypium raimondii HOM05D005996 ORTHO05D007507 5.7e-161 572.8 1055 60.5
Glyma.09G218800 Glycine max HOM05D005996 ORTHO05D007507 1.3e-160 571.6 1080 58.7
TAR628G0048 Trochodendron aralioides HOM05D005996 ORTHO05D007507 1.7e-160 571.2 736 62.0
Duzib248G0011 Durio zibethinus HOM05D005996 ORTHO05D007507 2.4e-159 567.4 1033 59.7
Migut.B00160 Erythranthe guttata HOM05D005996 ORTHO05D007507 1.2e-158 565.1 1043 59.8
Sed0023130 Sechium edule HOM05D005996 ORTHO05D007507 1.2e-158 565.1 1060 52.1
VMungo1127G0707 Vigna mungo HOM05D005996 ORTHO05D007507 1.2e-158 565.1 1069 57.8
Gohir.A13G098800 Gossypium hirsutum HOM05D005996 ORTHO05D007507 1.5e-158 564.7 1054 59.9
Sed0010933 Sechium edule HOM05D005996 ORTHO05D007507 3.4e-158 563.5 1053 59.6
COL.COLO4_17237 Corchorus olitorius HOM05D005996 ORTHO05D007507 4.5e-158 563.1 967 62.7
Glyma.12G033700 Glycine max HOM05D005996 ORTHO05D007507 7.7e-158 562.4 1071 57.1
Lsat_1_v5_gn_4_74240 Lactuca sativa HOM05D005996 ORTHO05D007507 2.3e-154 550.8 1055 59.5
ECA234G3379 Erigeron canadensis HOM05D005996 ORTHO05D007507 3.9e-154 550.1 1018 59.2
Sc08g0001200 Simmondsia chinensis HOM05D005996 ORTHO05D007507 8.8e-154 548.9 1065 60.2
Atru.chr5.3202 Acer truncatum HOM05D005996 ORTHO05D007507 4.4e-153 546.6 1071 59.4
CAN.G588.14 Capsicum annuum HOM05D005996 ORTHO05D007507 1.7e-152 544.7 1101 57.4
Prupe.8G158300 Prunus persica HOM05D005996 ORTHO05D007507 6.3e-152 542.7 1071 57.0
Eucgr.I01366 Eucalyptus grandis HOM05D005996 ORTHO05D007507 3.1e-151 540.4 1060 52.5
PGR142G2892 Punica granatum HOM05D005996 ORTHO05D007507 1.9e-148 531.2 1055 58.8
Aqoxy5G01766 Aquilegia oxysepala HOM05D005996 ORTHO05D007507 9.4e-148 528.9 1080 58.1
arahy.Tifrunner.gnm1.ann1.YQYF3H Arachis hypogaea HOM05D005996 ORTHO05D007507 6.1e-147 526.2 1101 54.9
arahy.Tifrunner.gnm1.ann1.XDQA6W Arachis hypogaea HOM05D005996 ORTHO05D007507 1.8e-146 524.6 1102 54.7
Ca_19076_v3 Cicer arietinum L. HOM05D005996 ORTHO05D007507 1.7e-144 518.1 927 49.3
MBI09_g26149_MAGBIO Magnolia biondii HOM05D005996 ORTHO05D007507 1.4e-143 515.0 1026 59.7
MELO3C020773.2 Cucumis melo HOM05D005996 ORTHO05D007507 1.8e-143 514.6 1064 56.9
Medtr4g072990 Medicago truncatula HOM05D005996 ORTHO05D007507 4.1e-143 513.5 1061 56.9
Solyc01g111020.3 Solanum lycopersicum HOM05D005996 ORTHO05D007507 4.1e-143 513.5 1121 55.8
SGA_v2.0_scaffold58G20447 Striga asiatica HOM05D005996 ORTHO05D007507 4.5e-142 510.0 1065 52.5
Phvul.011G036300 Phaseolus vulgaris HOM05D005996 ORTHO05D007507 5.9e-142 509.6 1074 55.5
Sp7g32590 Schrenkiella parvula HOM05D005996 ORTHO05D007507 7.7e-142 509.2 1035 58.1
FAN15G0761 Fragaria x ananassa HOM05D005996 ORTHO05D007507 3.2e-140 503.8 1066 56.3
FAN27G2880 Fragaria x ananassa HOM05D005996 ORTHO05D007507 5.5e-140 503.1 1059 57.7
PSO170G2255 Papaver somniferum HOM05D005996 ORTHO05D007507 9.4e-140 502.3 1064 57.7
AL7G16380 Arabidopsis lyrata HOM05D005996 ORTHO05D007507 1.0e-138 498.8 1062 56.6
FAN20G0865 Fragaria x ananassa HOM05D005996 ORTHO05D007507 3.0e-138 497.3 1066 55.8
AT4G34830 Arabidopsis thaliana HOM05D005996 ORTHO05D007507 2.0e-137 494.6 1056 56.3
Sopen01g053080 Solanum pennellii HOM05D005996 ORTHO05D007507 2.0e-137 494.6 1156 53.6
Lj3g0021328 Lotus japonicus HOM05D005996 ORTHO05D007507 4.8e-136 490.0 1034 57.6
BcaNung00650 Brassica carinata HOM05D005996 ORTHO05D007507 8.3e-136 489.2 1065 55.8
PSO700G0013 Papaver somniferum HOM05D005996 ORTHO05D007507 1.1e-135 488.8 1082 57.2
TPR.G39263 Trifolium pratense HOM05D005996 ORTHO05D007507 3.5e-134 483.8 1041 56.0
EL10Ac9g22244 Beta vulgaris HOM05D005996 ORTHO05D007507 3.6e-131 473.8 1218 49.4
AUR62010338 Chenopodium quinoa HOM05D005996 ORTHO05D007507 3.1e-127 460.7 907 57.4
Nitab4.5_0000980g0320 Nicotiana tabacum HOM05D005996 ORTHO05D007507 4.1e-127 460.3 1063 53.0
HanXRQChr10g0296321 Helianthus annuus HOM05D005996 ORTHO05D007507 1.2e-126 458.8 1079 55.6
Hund06298 Selenicereus undatus HOM05D005996 ORTHO05D007507 3.3e-124 450.7 1057 51.6
Psat7g180560 Pisum sativum HOM05D005996 ORTHO05D007507 6.1e-123 446.4 1023 55.1
Ah.01g018430 Amaranthus hybridus HOM05D005996 ORTHO05D007507 1.0e-122 445.7 869 56.5
Ciclev10027915m.g Citrus clementina HOM05D005996 ORTHO05D007507 2.2e-120 438.0 635 78.1
Thhalv10024275m.g Eutrema salsugineum HOM05D005996 ORTHO05D007507 7.0e-119 433.0 1036 55.0
BolC1t00389H Brassica oleracea HOM05D005996 ORTHO05D007507 9.2e-119 432.6 1087 52.9
THA.LOC104807280 Tarenaya hassleriana HOM05D005996 ORTHO05D007507 6.6e-117 426.4 1051 54.4
C01p03970 Brassica napus HOM05D005996 ORTHO05D007507 1.1e-116 425.6 1110 52.1
BraA01t00353Z Brassica rapa HOM05D005996 ORTHO05D007507 5.6e-116 423.3 1101 51.9
Aa31LG2G15710 Aethionema arabicum HOM05D005996 ORTHO05D007507 6.1e-115 419.9 1058 53.2
A01p03690 Brassica napus HOM05D005996 ORTHO05D007507 2.3e-114 417.9 1100 52.0
Lalb_Chr01g0001941 Lupinus albus HOM05D005996 ORTHO05D007507 2.0e-110 404.8 788 65.9
CSS0029020 Camellia sinensis var. sinensis HOM05D005996 ORTHO05D007507 3.0e-109 401.0 419 84.0
ATR0955G004 Amborella trichopoda HOM05D005996 ORTHO05D007507 1.1e-103 382.5 1089 51.6
Carub.0007s0547 Capsella rubella HOM05D005996 ORTHO05D007507 3.2e-103 380.9 844 60.2
Os10g0181200 Oryza sativa ssp. japonica HOM05D005996 ORTHO05D007507 4.1e-95 354.0 612 66.8
HPP92_022112 Vanilla planifolia HOM05D005996 ORTHO05D007507 7.1e-95 353.2 1084 45.9
PGSC0003DMG400001599 Solanum tuberosum HOM05D005996 ORTHO05D007507 2.8e-83 314.7 753 48.9
TAR628G0092 Trochodendron aralioides HOM05D005996 ORTHO05D007507 4.3e-68 264.2 165 79.4
AUR62016883 Chenopodium quinoa HOM05D005996 ORTHO05D007507 1.8e-66 258.8 854 44.1
TWI75G0933 Tripterygium wilfordii HOM05D005996 ORTHO05D007507 2.7e-62 245.0 257 50.6
CARHR243120 Cardamine hirsuta HOM05D005996 ORTHO05D007507 1.8e-61 242.3 682 47.1
BcaNung04307 Brassica carinata HOM05D005996 ORTHO05D007507 8.2e-59 233.4 180 61.7
Hma1.2p1_0032F.1_g019730 Hydrangea macrophylla HOM05D005996 ORTHO05D007507 6.5e-56 223.8 257 91.1
Zm00001eb027100 Zea mays HOM05D005996 ORTHO05D007507 3.8e-48 198.0 293 69.6
Nitab4.5_0000980g0280 Nicotiana tabacum HOM05D005996 ORTHO05D007507 2.7e-46 191.8 123 76.4
CDE09G0530 Ceratophyllum demersum HOM05D005996 ORTHO05D007507 5.7e-44 184.1 278 77.0
ATR0913G001 Amborella trichopoda HOM05D005996 ORTHO05D007507 1.1e-39 169.9 730 40.8
AagrBONN_evm.TU.Sc2ySwM_228.2051 Anthoceros agrestis HOM05D005996 ORTHO05D007507 5.7e-36 157.5 636 61.0
CDE09G0259 Ceratophyllum demersum HOM05D005996 ORTHO05D007507 3.5e-33 148.3 149 53.0
SMO340G0075 Selaginella moellendorffii HOM05D005996 ORTHO05D007507 1.1e-28 133.3 614 48.4
SEGI_22573 Sequoiadendron giganteum HOM05D005996 ORTHO05D007507 1.1e-28 133.3 109 60.6
Pp3c12_14320 Physcomitrium patens HOM05D005996 ORTHO05D007507 9.1e-26 123.6 158 43.7
Pp3c10_19570 Physcomitrium patens HOM05D005996 ORTHO05D007507 4.2e-23 114.8 195 36.9
Mapoly0039s0078 Marchantia polymorpha HOM05D005996 ORTHO05D007507 5.5e-23 114.4 654 56.4
Pp3c7_22430 Physcomitrium patens HOM05D005996 ORTHO05D007507 1.0e-21 110.2 616 53.2
SMO240G0032 Selaginella moellendorffii HOM05D005996 ORTHO05D007507 4.0e-21 108.2 94 54.3
CDE09G0717 Ceratophyllum demersum HOM05D005996 ORTHO05D007507 1.5e-20 106.3 99 75.8
Mapoly0039s0079 Marchantia polymorpha HOM05D005996 ORTHO05D007507 1.5e-20 106.3 616 58.0
QL11p047023 Quercus lobata HOM05D005996 ORTHO05D007507 1.3e-19 103.2 112 54.5
Ciclev10028828m.g Citrus clementina HOM05D005996 ORTHO05D007507 2.4e-18 99.0 375 30.9
Actinidia21406 Actinidia chinensis HOM05D005996 ORTHO05D007507 9.4e-15 87.0 175 35.4
CBR_g66762 Chara braunii HOM05D005996 ORTHO05D007507 4.4e-12 78.2 196 28.6
CDE09G0218 Ceratophyllum demersum HOM05D005996 ORTHO05D007507 4.9e-11 74.7 47 74.5
MBI09_g44523_MAGBIO Magnolia biondii HOM05D005996 ORTHO05D007507 6.3e-11 74.3 48 75.0
MBI09_g46961_MAGBIO Magnolia biondii HOM05D005996 ORTHO05D007507 5.9e-09 67.8 39 84.6
SEGI_00210 Sequoiadendron giganteum HOM05D005996 ORTHO05D007507 1.3e-08 66.6 50 64.0
SMO106G0001 Selaginella moellendorffii HOM05D013590 ORTHO05D015741 1.7e-08 66.2 61 52.5
MCO09G858 Micromonas commoda HOM05D005996 ORTHO05D007507 9.5e-07 60.5 159 31.4


User provided reference genes

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