Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41931 Davidia involucrata HOM05D006047 ORTHO05D007353 1.9e-94 349.4 204 100.0
Hma1.2p1_0163F.1_g072560 Hydrangea macrophylla HOM05D006047 ORTHO05D007353 2.8e-53 212.6 152 78.3
vmacro17314 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 4.6e-48 195.3 147 74.1
Rhsim05G0054100 Rhododendron simsii HOM05D006047 ORTHO05D007353 2.3e-47 193.0 171 65.5
CSS0000109 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 2.4e-44 183.0 146 69.2
Peaxi162Scf00362g00511 Petunia axillaris HOM05D006047 ORTHO05D007353 3.1e-44 182.6 148 71.6
vmacro17313 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 5.3e-44 181.8 147 70.1
PGSC0003DMG400006182 Solanum tuberosum HOM05D006047 ORTHO05D007353 1.5e-43 180.3 150 68.0
Manes.11G097000 Manihot esculenta HOM05D006047 ORTHO05D007353 2.6e-43 179.5 152 66.4
Solyc01g111670.4 Solanum lycopersicum HOM05D006047 ORTHO05D007353 3.8e-42 175.6 149 65.8
Sopen01g053710 Solanum pennellii HOM05D006047 ORTHO05D007353 3.8e-42 175.6 149 65.8
CiPaw.06G121100 Carya illinoinensis HOM05D006047 ORTHO05D007353 6.5e-42 174.9 152 66.4
Duzib132G0293 Durio zibethinus HOM05D006047 ORTHO05D007353 1.9e-41 173.3 148 64.2
Thecc.02G058000 Theobroma cacao HOM05D006047 ORTHO05D007353 1.9e-41 173.3 149 65.1
GSVIVG01024006001 Vitis vinifera HOM05D006047 ORTHO05D007353 5.5e-41 171.8 172 59.9
MBI16_g27295_MAGBIO Magnolia biondii HOM05D006047 ORTHO05D007353 7.2e-41 171.4 149 65.1
COL.COLO4_17357 Corchorus olitorius HOM05D006047 ORTHO05D007353 9.3e-41 171.0 147 66.0
PGR042G1307 Punica granatum HOM05D006047 ORTHO05D007353 1.6e-40 170.2 152 65.1
TAR625G1286 Trochodendron aralioides HOM05D006047 ORTHO05D007353 1.6e-40 170.2 151 64.9
TAR625G1483 Trochodendron aralioides HOM05D006047 ORTHO05D007353 1.6e-40 170.2 151 64.9
Gohir.D02G226700 Gossypium hirsutum HOM05D006047 ORTHO05D007353 2.7e-40 169.5 149 61.1
Gorai.005G254600 Gossypium raimondii HOM05D006047 ORTHO05D007353 2.7e-40 169.5 149 61.1
CiPaw.05G083500 Carya illinoinensis HOM05D006047 ORTHO05D007353 4.6e-40 168.7 151 62.3
Nn6g31863 Nelumbo nucifera HOM05D006047 ORTHO05D007353 4.6e-40 168.7 151 68.2
Gohir.A03G205400 Gossypium hirsutum HOM05D006047 ORTHO05D007353 7.9e-40 167.9 149 61.1
MD10G1125900 Malus domestica HOM05D006047 ORTHO05D007353 7.9e-40 167.9 144 65.3
Potri.009G136100 Populus trichocarpa HOM05D006047 ORTHO05D007353 1.0e-39 167.5 152 62.5
Aqoxy1G03282 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 5.1e-39 165.2 148 65.5
MD05G1123100 Malus domestica HOM05D006047 ORTHO05D007353 5.1e-39 165.2 149 65.1
Aqoxy3G00951 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 8.7e-39 164.5 148 65.5
Cpa.g.sc20.97 Carica papaya HOM05D006047 ORTHO05D007353 1.1e-38 164.1 153 63.4
CANSAT21G1105 Cannabis sativa HOM05D006047 ORTHO05D007353 2.5e-38 162.9 151 60.9
Gohir.A01G002200 Gossypium hirsutum HOM05D006047 ORTHO05D007353 2.5e-38 162.9 145 64.1
Sopen11g024350 Solanum pennellii HOM05D006047 ORTHO05D007353 4.3e-38 162.2 147 63.9
PSO782G4934 Papaver somniferum HOM05D006047 ORTHO05D007353 9.7e-38 161.0 151 58.9
EL10Ac9g21359 Beta vulgaris HOM05D006047 ORTHO05D007353 1.3e-37 160.6 144 61.8
Gorai.002G002400 Gossypium raimondii HOM05D006047 ORTHO05D007353 1.3e-37 160.6 144 63.9
CSS0028471 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 1.6e-37 160.2 153 64.7
PSO063G4836 Papaver somniferum HOM05D006047 ORTHO05D007353 1.6e-37 160.2 151 60.3
Gohir.D01G001800 Gossypium hirsutum HOM05D006047 ORTHO05D007353 2.2e-37 159.8 144 62.5
Lsat_1_v5_gn_4_71821 Lactuca sativa HOM05D006047 ORTHO05D007353 2.8e-37 159.5 146 66.4
Sc08g0002850 Simmondsia chinensis HOM05D006047 ORTHO05D007353 3.7e-37 159.1 143 64.3
SGA_v2.0_scaffold207G41930 Striga asiatica HOM05D006047 ORTHO05D007353 3.7e-37 159.1 142 64.1
Cfa005258 Carpinus fangiana HOM05D006047 ORTHO05D007353 6.3e-37 158.3 154 63.6
Eucgr.G01785 Eucalyptus grandis HOM05D006047 ORTHO05D007353 6.3e-37 158.3 158 59.5
Migut.N01327 Erythranthe guttata HOM05D006047 ORTHO05D007353 1.1e-36 157.5 142 62.7
Prupe.8G167000 Prunus persica HOM05D006047 ORTHO05D007353 1.1e-36 157.5 149 61.7
Sed0015003 Sechium edule HOM05D006047 ORTHO05D007353 1.1e-36 157.5 150 61.3
ClCG02G012010 Citrullus lanatus HOM05D006047 ORTHO05D007353 1.4e-36 157.1 144 61.1
Ciclev10029458m.g Citrus clementina HOM05D006047 ORTHO05D007353 1.8e-36 156.8 157 58.6
Cc09_g09850 Coffea canephora HOM05D006047 ORTHO05D007353 9.0e-36 154.5 154 61.0
Atru.chr5.3378 Acer truncatum HOM05D006047 ORTHO05D007353 1.5e-35 153.7 158 58.2
AUR62010029 Chenopodium quinoa HOM05D006047 ORTHO05D007353 3.4e-35 152.5 144 61.1
HanXRQChr10g0300821 Helianthus annuus HOM05D006047 ORTHO05D007353 3.4e-35 152.5 144 63.9
MELO3C020826.2 Cucumis melo HOM05D006047 ORTHO05D007353 5.9e-35 151.8 144 59.0
Actinidia32040 Actinidia chinensis HOM05D006047 ORTHO05D007353 7.7e-35 151.4 134 64.9
AUR62013019 Chenopodium quinoa HOM05D006047 ORTHO05D007353 7.7e-35 151.4 144 61.1
RcHm_v2.0_Chr6g0278481 Rosa chinensis HOM05D006047 ORTHO05D007353 7.7e-35 151.4 144 61.1
unitig_52.g17373 Utricularia gibba HOM05D006047 ORTHO05D007353 1.0e-34 151.0 144 61.1
HPP92_012949 Vanilla planifolia HOM05D006047 ORTHO05D007353 1.0e-34 151.0 152 60.5
Sabra09G0105700 Salix brachista HOM05D006047 ORTHO05D007353 1.3e-34 150.6 142 59.9
DCAR_003178 Daucus carota HOM05D006047 ORTHO05D007353 2.2e-34 149.8 141 60.3
FvH4_2g15480 Fragaria vesca HOM05D006047 ORTHO05D007353 2.2e-34 149.8 144 60.4
FAN24G2638 Fragaria x ananassa HOM05D006047 ORTHO05D007353 2.2e-34 149.8 144 60.4
CsaV3_2G016180 Cucumis sativus L. HOM05D006047 ORTHO05D007353 2.9e-34 149.4 144 59.0
SGA_v2.0_scaffold80G25840 Striga asiatica HOM05D006047 ORTHO05D007353 2.9e-34 149.4 142 62.0
SHI05754 Sapria himalayana HOM05D006047 ORTHO05D007353 6.5e-34 148.3 149 57.0
Sed0000957 Sechium edule HOM05D006047 ORTHO05D007353 6.5e-34 148.3 144 59.0
HanXRQChr12g0374651 Helianthus annuus HOM05D006047 ORTHO05D007353 1.1e-33 147.5 145 61.4
FAN20G3211 Fragaria x ananassa HOM05D006047 ORTHO05D007353 1.9e-33 146.7 144 59.7
Solyc03g044590.2 Solanum lycopersicum HOM05D006047 ORTHO05D007353 1.9e-33 146.7 146 58.9
Ah.01g023100 Amaranthus hybridus HOM05D006047 ORTHO05D007353 2.5e-33 146.4 149 55.7
Actinidia21466 Actinidia chinensis HOM05D006047 ORTHO05D007353 3.2e-33 146.0 133 63.2
FAN27G2596 Fragaria x ananassa HOM05D001601 ORTHO05D002628 4.2e-33 145.6 144 59.7
Glyma.09G245500 Glycine max HOM05D006047 ORTHO05D007353 7.2e-33 144.8 142 59.2
Psat3g100240 Pisum sativum HOM05D006047 ORTHO05D007353 7.2e-33 144.8 143 56.6
Duzib248G0446 Durio zibethinus HOM05D006047 ORTHO05D007353 9.4e-33 144.4 148 57.4
Actinidia39157 Actinidia chinensis HOM05D006047 ORTHO05D007353 1.6e-32 143.7 133 62.4
Lalb_Chr01g0021661 Lupinus albus HOM05D006047 ORTHO05D007353 1.6e-32 143.7 143 59.4
VMungo1383G0342 Vigna mungo HOM05D006047 ORTHO05D007353 1.6e-32 143.7 144 58.3
Haze_02125 Corylus avellana HOM05D006047 ORTHO05D007353 2.7e-32 142.9 153 60.1
FAN15G3104 Fragaria x ananassa HOM05D006047 ORTHO05D007353 2.7e-32 142.9 144 59.0
Glyma.18G247500 Glycine max HOM05D006047 ORTHO05D007353 2.7e-32 142.9 143 59.4
Ca_08043_v3 Cicer arietinum L. HOM05D006047 ORTHO05D007353 3.6e-32 142.5 143 57.3
TPR.G32107 Trifolium pratense HOM05D006047 ORTHO05D007353 4.6e-32 142.1 142 57.7
Medtr7g081070 Medicago truncatula HOM05D006047 ORTHO05D007353 6.1e-32 141.7 144 55.6
Phvul.008G049800 Phaseolus vulgaris HOM05D006047 ORTHO05D007353 2.3e-31 139.8 144 56.9
ATR0064G037 Amborella trichopoda HOM05D006047 ORTHO05D007353 3.9e-31 139.0 150 56.7
ECA234G0646 Erigeron canadensis HOM05D006047 ORTHO05D000476 3.9e-31 139.0 138 61.6
Lalb_Chr19g0126421 Lupinus albus HOM05D006047 ORTHO05D007353 1.1e-30 137.5 144 56.2
Lj1g0011713 Lotus japonicus HOM05D006047 ORTHO05D007353 2.0e-30 136.7 146 56.8
Lsat_1_v5_gn_8_123180 Lactuca sativa HOM05D006047 ORTHO05D007353 3.3e-30 136.0 144 60.4
Aa31LG6G16610 Aethionema arabicum HOM05D006047 ORTHO05D007353 4.3e-30 135.6 142 55.6
AT2G20940 Arabidopsis thaliana HOM05D006047 ORTHO05D007353 4.8e-29 132.1 142 54.2
CDE02G0256 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 4.8e-29 132.1 138 58.0
QL11p050986 Quercus lobata HOM05D006047 ORTHO05D007353 4.8e-29 132.1 136 58.1
AL4G10070 Arabidopsis lyrata HOM05D006047 ORTHO05D007353 1.1e-28 131.0 142 53.5
CARHR174220 Cardamine hirsuta HOM05D006047 ORTHO05D007353 2.4e-28 129.8 143 52.4
Zm00001eb331780 Zea mays HOM05D006047 ORTHO05D007353 3.1e-28 129.4 154 52.6
Sp4g00130 Schrenkiella parvula HOM05D006047 ORTHO05D007353 9.1e-28 127.9 141 52.5
Nitab4.5_0000283g0480 Nicotiana tabacum HOM05D006047 ORTHO05D007353 1.5e-27 127.1 142 55.6
Carub.0004s0003 Capsella rubella HOM05D006047 ORTHO05D007353 2.6e-27 126.3 142 52.8
Thhalv10000376m.g Eutrema salsugineum HOM05D006047 ORTHO05D007353 2.6e-27 126.3 141 53.9
TWI31G0769 Tripterygium wilfordii HOM05D006047 ORTHO05D007353 7.7e-27 124.8 145 50.3
THA.LOC104824759 Tarenaya hassleriana HOM05D006047 ORTHO05D007353 2.9e-26 122.9 142 52.1
Zm00001eb103880 Zea mays HOM05D006047 ORTHO05D007353 3.8e-26 122.5 146 54.1
BcaB06g27764 Brassica carinata HOM05D006047 ORTHO05D007353 6.5e-26 121.7 140 50.0
A04p15840 Brassica napus HOM05D006047 ORTHO05D007353 3.2e-25 119.4 140 48.6
C04p50240 Brassica napus HOM05D006047 ORTHO05D007353 3.2e-25 119.4 140 48.6
BolC4t26624H Brassica oleracea HOM05D006047 ORTHO05D007353 3.2e-25 119.4 140 48.6
BraA04t17215Z Brassica rapa HOM05D006047 ORTHO05D007353 3.2e-25 119.4 140 48.6
AagrBONN_evm.TU.Sc2ySwM_362.1962 Anthoceros agrestis HOM05D006047 ORTHO05D007353 6.1e-24 115.2 142 50.0
Sopen11g011060 Solanum pennellii HOM05D011435 ORTHO05D012656 1.4e-23 114.0 136 53.7
Pp3c24_20200 Physcomitrium patens HOM05D006047 ORTHO05D007353 3.0e-23 112.8 141 48.9
Nitab4.5_0003914g0120 Nicotiana tabacum HOM05D006047 ORTHO05D007353 6.7e-23 111.7 128 54.7
MD05G1195600 Malus domestica HOM05D006047 ORTHO05D007353 9.1e-20 101.3 124 51.6
BcaB01g02958 Brassica carinata HOM05D006047 ORTHO05D007353 2.0e-19 100.1 141 43.3
SEGI_27161 Sequoiadendron giganteum HOM05D006047 ORTHO05D007353 4.5e-19 99.0 118 54.2
CDE04G1108 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 7.7e-19 98.2 117 52.1
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 7.7e-19 98.2 149 41.6
CAN.G588.87 Capsicum annuum HOM05D006047 ORTHO05D007353 5.5e-17 92.0 74 66.2
SMO367G0473 Selaginella moellendorffii HOM05D006047 ORTHO05D007353 9.4e-17 91.3 142 42.3
PGR083G0073 Punica granatum HOM05D006047 ORTHO05D007353 2.7e-16 89.7 146 44.5
Sed0021144 Sechium edule HOM05D006047 ORTHO05D007353 8.2e-13 78.2 62 66.1
SalBow5G2603 Salvia bowleyana HOM05D006047 ORTHO05D007353 1.1e-12 77.8 97 48.5
Sed0002860 Sechium edule HOM05D006047 ORTHO05D007353 4.1e-12 75.9 62 64.5
TAR624G0128 Trochodendron aralioides HOM05D006047 ORTHO05D007353 1.2e-08 64.3 64 60.9
BcaC01g04858 Brassica carinata HOM05D006047 ORTHO05D007353 1.6e-08 63.9 141 34.0
HPP92_025899 Vanilla planifolia HOM05D006047 ORTHO05D007353 2.1e-08 63.5 46 58.7
Zm00001eb046330 Zea mays HOM05D001486 ORTHO05D036446 3.0e-07 59.7 44 72.7


User provided reference genes

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