Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41888 Davidia involucrata HOM05D003235 ORTHO05D003863 1.8e-125 452.6 228 100.0
Actinidia32018 Actinidia chinensis HOM05D003235 ORTHO05D003863 1.4e-40 170.6 122 70.5
Rhsim11G0196500 Rhododendron simsii HOM05D003235 ORTHO05D003863 2.8e-38 162.9 79 92.4
Atru.chr5.3499 Acer truncatum HOM05D003235 ORTHO05D003863 3.7e-38 162.5 154 57.8
Ciclev10028672m.g Citrus clementina HOM05D003235 ORTHO05D003863 3.7e-38 162.5 154 57.8
CSS0024694 Camellia sinensis var. sinensis HOM05D003235 ORTHO05D003863 1.1e-37 161.0 154 57.1
Cc08_g00700 Coffea canephora HOM05D003235 ORTHO05D003863 1.1e-37 161.0 154 57.1
Cc09_g10610 Coffea canephora HOM05D003235 ORTHO05D003863 1.1e-37 161.0 154 57.1
Peaxi162Scf00362g00250 Petunia axillaris HOM05D003235 ORTHO05D003863 1.1e-37 161.0 154 57.1
Cpa.g.sc20.187 Carica papaya HOM05D003235 ORTHO05D003863 1.4e-37 160.6 154 55.8
Prupe.8G176600 Prunus persica HOM05D003235 ORTHO05D003863 1.8e-37 160.2 154 56.5
TPR.G31486 Trifolium pratense HOM05D003235 ORTHO05D003863 2.4e-37 159.8 127 64.6
Dinv14158 Davidia involucrata HOM05D003235 ORTHO05D003863 3.1e-37 159.5 154 56.5
CAN.G1235.15 Capsicum annuum HOM05D003235 ORTHO05D003863 4.1e-37 159.1 154 55.8
Manes.11G106900 Manihot esculenta HOM05D003235 ORTHO05D003863 5.4e-37 158.7 154 55.8
Solyc08g082340.3 Solanum lycopersicum HOM05D003235 ORTHO05D003863 5.4e-37 158.7 154 55.2
Sopen08g030600 Solanum pennellii HOM05D003235 ORTHO05D003863 5.4e-37 158.7 154 55.2
PGSC0003DMG400012284 Solanum tuberosum HOM05D003235 ORTHO05D003863 5.4e-37 158.7 154 55.2
MSTRG.27622 Avicennia marina HOM05D003235 ORTHO05D003863 9.1e-37 157.9 154 57.1
Thecc.02G046900 Theobroma cacao HOM05D003235 ORTHO05D003863 9.1e-37 157.9 154 56.5
TWI31G0863 Tripterygium wilfordii HOM05D003235 ORTHO05D003863 9.1e-37 157.9 154 56.5
Actinidia18009 Actinidia chinensis HOM05D003235 ORTHO05D003863 1.2e-36 157.5 77 93.5
CiPaw.06G117700 Carya illinoinensis HOM05D003235 ORTHO05D003863 1.2e-36 157.5 154 57.1
Lj9A405T66 Lonicera japonica HOM05D003235 ORTHO05D003863 1.2e-36 157.5 154 55.2
Manes.04G065100 Manihot esculenta HOM05D003235 ORTHO05D003863 1.2e-36 157.5 154 56.5
vmacro09726 Vaccinium macrocarpon HOM05D003235 ORTHO05D003863 1.2e-36 157.5 154 56.5
Potri.004G183300 Populus trichocarpa HOM05D003235 ORTHO05D003863 1.6e-36 157.1 154 55.2
Rhsim05G0048800 Rhododendron simsii HOM05D003235 ORTHO05D003863 2.0e-36 156.8 154 56.5
TWI79G1341 Tripterygium wilfordii HOM05D003235 ORTHO05D003863 2.0e-36 156.8 154 55.8
COL.COLO4_17945 Corchorus olitorius HOM05D003235 ORTHO05D003863 2.7e-36 156.4 154 55.8
MD10G1138100 Malus domestica HOM05D003235 ORTHO05D003863 2.7e-36 156.4 154 55.8
unitig_749.g13984 Utricularia gibba HOM05D003235 ORTHO05D003863 2.7e-36 156.4 154 55.8
Haze_02042 Corylus avellana HOM05D003235 ORTHO05D003863 3.5e-36 156.0 154 55.8
FvH4_2g16380 Fragaria vesca HOM05D003235 ORTHO05D003863 3.5e-36 156.0 74 95.9
FAN15G0986 Fragaria x ananassa HOM05D003235 ORTHO05D003863 3.5e-36 156.0 74 95.9
FAN24G0538 Fragaria x ananassa HOM05D003235 ORTHO05D003863 3.5e-36 156.0 74 95.9
FAN24G1371 Fragaria x ananassa HOM05D003235 ORTHO05D003863 3.5e-36 156.0 74 95.9
QL11p054430 Quercus lobata HOM05D003235 ORTHO05D003863 3.5e-36 156.0 154 55.2
QL11p054583 Quercus lobata HOM05D003235 ORTHO05D003863 3.5e-36 156.0 154 55.2
SGA_v2.0_scaffold98G29294 Striga asiatica HOM05D003235 ORTHO05D003863 3.5e-36 156.0 154 55.8
CAN.G1804.1 Capsicum annuum HOM05D003235 ORTHO05D003863 4.5e-36 155.6 154 53.9
RcHm_v2.0_Chr6g0280151 Rosa chinensis HOM05D003235 ORTHO05D003863 4.5e-36 155.6 74 94.6
GSVIVG01023935001 Vitis vinifera HOM05D003235 ORTHO05D003863 4.5e-36 155.6 154 55.2
Migut.N01350 Erythranthe guttata HOM05D003235 ORTHO05D003863 5.9e-36 155.2 154 55.8
MD00G1083900 Malus domestica HOM05D003235 ORTHO05D003863 7.7e-36 154.8 154 55.2
TAR627G1023 Trochodendron aralioides HOM05D003235 ORTHO05D003863 7.7e-36 154.8 154 55.2
CiPaw.05G089800 Carya illinoinensis HOM05D003235 ORTHO05D003863 1.0e-35 154.5 154 55.8
Duzib248G1500 Durio zibethinus HOM05D003235 ORTHO05D003863 1.0e-35 154.5 154 55.2
FvH4_5g27680 Fragaria vesca HOM05D003235 ORTHO05D003863 1.0e-35 154.5 74 94.6
MBI02_g34309_MAGBIO Magnolia biondii HOM05D003235 ORTHO05D003863 1.3e-35 154.1 154 55.2
Sed0003744 Sechium edule HOM05D003235 ORTHO05D003863 1.3e-35 154.1 154 55.2
THA.LOC104819684 Tarenaya hassleriana HOM05D003235 ORTHO05D003863 1.3e-35 154.1 154 54.5
PGR142G4436 Punica granatum HOM05D003235 ORTHO05D003863 1.7e-35 153.7 154 55.2
ECA236G3279 Erigeron canadensis HOM05D003235 ORTHO05D003863 2.3e-35 153.3 154 54.5
HanXRQChr11g0335221 Helianthus annuus HOM05D003235 ORTHO05D003863 2.3e-35 153.3 154 54.5
Lsat_1_v5_gn_7_116021 Lactuca sativa HOM05D003235 ORTHO05D003863 2.3e-35 153.3 154 54.5
VMungo0251G0657 Vigna mungo HOM05D003235 ORTHO05D003863 2.3e-35 153.3 84 82.1
QL10p000641 Quercus lobata HOM05D003235 ORTHO05D003863 2.9e-35 152.9 154 54.5
THA.LOC104807394 Tarenaya hassleriana HOM05D003235 ORTHO05D003863 2.9e-35 152.9 154 53.2
vmacro17286 Vaccinium macrocarpon HOM05D003235 ORTHO05D003863 2.9e-35 152.9 74 94.6
Glyma.05G131100 Glycine max HOM05D003235 ORTHO05D003863 5.0e-35 152.1 74 91.9
Glyma.08G085800 Glycine max HOM05D003235 ORTHO05D003863 5.0e-35 152.1 74 91.9
Phvul.002G191600 Phaseolus vulgaris HOM05D003235 ORTHO05D003863 5.0e-35 152.1 74 91.9
TAR624G0177 Trochodendron aralioides HOM05D005511 ORTHO05D006616 5.0e-35 152.1 154 53.9
Gohir.A04G125200 Gossypium hirsutum HOM05D003235 ORTHO05D003863 6.6e-35 151.8 154 54.5
Gohir.D04G170000 Gossypium hirsutum HOM05D003235 ORTHO05D003863 6.6e-35 151.8 154 54.5
Gorai.012G158300 Gossypium raimondii HOM05D003235 ORTHO05D003863 6.6e-35 151.8 154 54.5
Sp7g33030 Schrenkiella parvula HOM05D003235 ORTHO05D003863 6.6e-35 151.8 154 52.6
CANSAT11G0145 Cannabis sativa HOM05D003235 ORTHO05D003863 8.6e-35 151.4 154 54.5
CDE11G0005 Ceratophyllum demersum HOM05D003235 ORTHO05D003863 8.6e-35 151.4 93 80.6
MELO3C013265.2 Cucumis melo HOM05D003235 ORTHO05D003863 8.6e-35 151.4 154 54.5
CsaV3_7G001740 Cucumis sativus L. HOM05D003235 ORTHO05D003863 8.6e-35 151.4 154 54.5
Lalb_Chr15g0083901 Lupinus albus HOM05D003235 ORTHO05D003863 8.6e-35 151.4 154 53.2
Nn1g03654 Nelumbo nucifera HOM05D003235 ORTHO05D003863 8.6e-35 151.4 154 53.9
SalBow5G2197 Salvia bowleyana HOM05D003235 ORTHO05D003863 1.1e-34 151.0 74 91.9
Ca_25919_v3 Cicer arietinum L. HOM05D003235 ORTHO05D003863 1.5e-34 150.6 154 53.2
Ah.01g023630 Amaranthus hybridus HOM05D003235 ORTHO05D003863 1.9e-34 150.2 74 89.2
CARHR274300 Cardamine hirsuta HOM05D003235 ORTHO05D003863 1.9e-34 150.2 154 51.9
Nitab4.5_0000783g0290 Nicotiana tabacum HOM05D003235 ORTHO05D003863 1.9e-34 150.2 151 54.3
AL8G37210 Arabidopsis lyrata HOM05D003235 ORTHO05D003863 2.5e-34 149.8 154 52.6
AT5G60620 Arabidopsis thaliana HOM05D003235 ORTHO05D003863 2.5e-34 149.8 154 52.6
Carub.0008s2130 Capsella rubella HOM05D003235 ORTHO05D003863 2.5e-34 149.8 154 52.6
ECA233G5747 Erigeron canadensis HOM05D003235 ORTHO05D003863 2.5e-34 149.8 154 54.5
Eucgr.I01507 Eucalyptus grandis HOM05D003235 ORTHO05D003863 2.5e-34 149.8 74 91.9
FAN08G2058 Fragaria x ananassa HOM05D003235 ORTHO05D003863 2.5e-34 149.8 74 91.9
Gohir.A03G209200 Gossypium hirsutum HOM05D003235 ORTHO05D003863 2.5e-34 149.8 154 52.6
Gohir.D02G230900 Gossypium hirsutum HOM05D003235 ORTHO05D003863 2.5e-34 149.8 154 52.6
Gorai.005G258500 Gossypium raimondii HOM05D003235 ORTHO05D003863 2.5e-34 149.8 154 52.6
Lalb_Chr20g0114201 Lupinus albus HOM05D003235 ORTHO05D003863 2.5e-34 149.8 154 52.6
Sc14g0002390 Simmondsia chinensis HOM05D003235 ORTHO05D003863 2.5e-34 149.8 73 93.2
Ah.01g007750 Amaranthus hybridus HOM05D003235 ORTHO05D003863 3.3e-34 149.4 74 90.5
ECA236G2309 Erigeron canadensis HOM05D003235 ORTHO05D000512 3.3e-34 149.4 74 90.5
Glyma.09G119200 Glycine max HOM05D003235 ORTHO05D003863 3.3e-34 149.4 74 90.5
Sp6g22200 Schrenkiella parvula HOM05D003235 ORTHO05D003863 3.3e-34 149.4 154 51.9
Actinidia20561 Actinidia chinensis HOM05D003235 ORTHO05D003863 4.2e-34 149.1 74 91.9
Ca_02021_v3 Cicer arietinum L. HOM05D003235 ORTHO05D003863 4.2e-34 149.1 154 52.6
Phvul.003G022900 Phaseolus vulgaris HOM05D003235 ORTHO05D003863 4.2e-34 149.1 74 89.2
PGR042G2488 Punica granatum HOM05D003235 ORTHO05D003863 4.2e-34 149.1 154 52.6
Hund00347 Selenicereus undatus HOM05D003235 ORTHO05D003863 4.2e-34 149.1 73 93.2
VMungo1215G3112 Vigna mungo HOM05D003235 ORTHO05D003863 4.2e-34 149.1 74 89.2
arahy.Tifrunner.gnm1.ann1.5A4VTA Arachis hypogaea HOM05D003235 ORTHO05D003863 5.5e-34 148.7 154 53.2
arahy.Tifrunner.gnm1.ann1.MB0JZI Arachis hypogaea HOM05D003235 ORTHO05D003863 5.5e-34 148.7 154 53.2
EL10Ac9g21270 Beta vulgaris HOM05D003235 ORTHO05D003863 5.5e-34 148.7 154 53.2
BcaNung00615 Brassica carinata HOM05D003235 ORTHO05D003863 5.5e-34 148.7 154 51.9
BcaNung00616 Brassica carinata HOM05D003235 ORTHO05D003863 5.5e-34 148.7 154 51.9
A01p03310 Brassica napus HOM05D003235 ORTHO05D003863 5.5e-34 148.7 154 51.9
C01p03650 Brassica napus HOM05D003235 ORTHO05D003863 5.5e-34 148.7 154 51.9
BolC1t00356H Brassica oleracea HOM05D003235 ORTHO05D003863 5.5e-34 148.7 154 51.9
BraA01t00316Z Brassica rapa HOM05D003235 ORTHO05D003863 5.5e-34 148.7 154 51.9
Lj6g0023552 Lotus japonicus HOM05D003235 ORTHO05D003863 5.5e-34 148.7 154 51.9
Medtr2g438210 Medicago truncatula HOM05D003235 ORTHO05D003863 5.5e-34 148.7 154 51.9
Sabra09G0111000 Salix brachista HOM05D003235 ORTHO05D003863 5.5e-34 148.7 158 51.9
Aa31LG2G14790 Aethionema arabicum HOM05D003235 ORTHO05D003863 7.2e-34 148.3 154 52.6
CDE05G0254 Ceratophyllum demersum HOM05D003235 ORTHO05D003863 7.2e-34 148.3 110 69.1
ClCG02G003570 Citrullus lanatus HOM05D003235 ORTHO05D003863 7.2e-34 148.3 154 53.9
Thhalv10013846m.g Eutrema salsugineum HOM05D003235 ORTHO05D003863 7.2e-34 148.3 154 51.3
Lsat_1_v5_gn_8_120260 Lactuca sativa HOM05D003235 ORTHO05D003863 7.2e-34 148.3 74 90.5
Aqoxy4G02019 Aquilegia oxysepala HOM05D003235 ORTHO05D003863 9.5e-34 147.9 154 52.6
arahy.Tifrunner.gnm1.ann1.0G9KRE Arachis hypogaea HOM05D003235 ORTHO05D003863 9.5e-34 147.9 154 52.6
arahy.Tifrunner.gnm1.ann1.S5QGNM Arachis hypogaea HOM05D003235 ORTHO05D003863 9.5e-34 147.9 154 52.6
Hund17321 Selenicereus undatus HOM05D003235 ORTHO05D003863 9.5e-34 147.9 74 89.2
AUR62012940 Chenopodium quinoa HOM05D003235 ORTHO05D003863 1.2e-33 147.5 93 75.3
AUR62027140 Chenopodium quinoa HOM05D003235 ORTHO05D003863 1.2e-33 147.5 93 75.3
Medtr4g127910 Medicago truncatula HOM05D003235 ORTHO05D003863 1.2e-33 147.5 154 51.3
Potri.009G143200 Populus trichocarpa HOM05D003235 ORTHO05D003863 1.2e-33 147.5 154 53.2
Aqoxy7G01395 Aquilegia oxysepala HOM05D003235 ORTHO05D003863 1.6e-33 147.1 154 51.9
BcaB08g36361 Brassica carinata HOM05D003235 ORTHO05D003863 2.1e-33 146.7 154 51.3
C09p53360 Brassica napus HOM05D003235 ORTHO05D003863 2.1e-33 146.7 154 51.3
DCAR_015672 Daucus carota HOM05D003235 ORTHO05D003863 2.1e-33 146.7 73 91.8
vmacro20801 Vaccinium macrocarpon HOM05D003235 ORTHO05D003863 2.1e-33 146.7 75 92.0
BcaC04g19724 Brassica carinata HOM05D003235 ORTHO05D003863 2.8e-33 146.4 154 50.6
A10p17830 Brassica napus HOM05D003235 ORTHO05D003863 2.8e-33 146.4 154 50.6
BolC9t58209H Brassica oleracea HOM05D003235 ORTHO05D003863 2.8e-33 146.4 154 50.6
FAN04G0585 Fragaria x ananassa HOM05D003235 ORTHO05D003863 2.8e-33 146.4 74 90.5
Sed0009233 Sechium edule HOM05D003235 ORTHO05D003863 2.8e-33 146.4 152 53.9
HanXRQChr14g0458991 Helianthus annuus HOM05D003235 ORTHO05D003863 3.6e-33 146.0 74 87.8
SHI05839 Sapria himalayana HOM05D003235 ORTHO05D003863 3.6e-33 146.0 74 87.8
PSO541G0846 Papaver somniferum HOM05D003235 ORTHO05D003863 1.4e-32 144.1 154 50.6
PSO675G5274 Papaver somniferum HOM05D003235 ORTHO05D003863 1.4e-32 144.1 154 50.6
Zm00001eb323170 Zea mays HOM05D003235 ORTHO05D003863 2.3e-32 143.3 154 51.9
Zm00001eb396350 Zea mays HOM05D003235 ORTHO05D003863 2.3e-32 143.3 154 51.9
ATR1159G019 Amborella trichopoda HOM05D003235 ORTHO05D003863 6.8e-32 141.7 74 87.8
SMO164G0177 Selaginella moellendorffii HOM05D003235 ORTHO05D003863 8.9e-32 141.4 74 85.1
AagrBONN_evm.TU.Sc2ySwM_344.1475 Anthoceros agrestis HOM05D003235 ORTHO05D003863 1.2e-31 141.0 77 81.8
FAN27G1339 Fragaria x ananassa HOM05D003235 ORTHO05D003863 1.2e-31 141.0 66 95.5
Mapoly0005s0123 Marchantia polymorpha HOM05D003235 ORTHO05D003863 1.5e-31 140.6 74 85.1
Os07g0531600 Oryza sativa ssp. japonica HOM05D003235 ORTHO05D003863 1.5e-31 140.6 153 51.6
FAN13G0036 Fragaria x ananassa HOM05D003235 ORTHO05D003863 2.6e-31 139.8 86 74.4
SalBow5G2974 Salvia bowleyana HOM05D003235 ORTHO05D003863 1.3e-30 137.5 67 92.5
Pp3c11_26030 Physcomitrium patens HOM05D003235 ORTHO05D003863 2.9e-30 136.3 74 81.1
Psat1g147840 Pisum sativum HOM05D003235 ORTHO05D003863 2.9e-30 136.3 68 91.2
Mapoly0113s0056 Marchantia polymorpha HOM05D003235 ORTHO05D003863 4.9e-30 135.6 74 81.1
SGA_v2.0_scaffold80G25821 Striga asiatica HOM05D003235 ORTHO05D003863 4.9e-30 135.6 66 92.4
HanXRQChr08g0236381 Helianthus annuus HOM05D003235 ORTHO05D003863 6.3e-30 135.2 74 83.8
HPP92_011715 Vanilla planifolia HOM05D003235 ORTHO05D003863 1.1e-29 134.4 70 85.7
AagrBONN_evm.TU.Sc2ySwM_344.5027 Anthoceros agrestis HOM05D003235 ORTHO05D003863 1.4e-29 134.0 74 79.7
Oeu051847.1 Olea europaea HOM05D003235 ORTHO05D003863 2.4e-29 133.3 67 86.6
HPP92_017619 Vanilla planifolia HOM05D003235 ORTHO05D003863 2.4e-29 133.3 73 83.6
Eucgr.G01836 Eucalyptus grandis HOM05D003235 ORTHO05D003863 1.0e-27 127.9 71 77.5
Eucgr.G01837 Eucalyptus grandis HOM05D003235 ORTHO05D003863 1.0e-27 127.9 71 77.5
Nn5g28784 Nelumbo nucifera HOM05D003235 ORTHO05D003863 2.9e-27 126.3 66 87.9
CBR_g18671 Chara braunii HOM05D003235 ORTHO05D003863 5.0e-27 125.6 72 79.2
vmacro20582 Vaccinium macrocarpon HOM05D003235 ORTHO05D003863 8.6e-27 124.8 66 86.4
SEGI_35719 Sequoiadendron giganteum HOM05D003235 ORTHO05D003863 1.5e-26 124.0 59 93.2
Actinidia26336 Actinidia chinensis HOM05D003235 ORTHO05D003863 1.2e-25 120.9 170 44.7
vmacro02323 Vaccinium macrocarpon HOM05D003235 ORTHO05D003863 2.1e-25 120.2 66 81.8
PRCOL_00006733 Prasinoderma coloniale HOM05D003235 ORTHO05D003863 5.2e-24 115.5 77 64.9
SEGI_03808 Sequoiadendron giganteum HOM05D003235 ORTHO05D003863 1.5e-23 114.0 61 85.2
MCO05G004 Micromonas commoda HOM05D003235 ORTHO05D003863 1.5e-18 97.4 80 53.8
Cre06.g273250 Chlamydomonas reinhardtii HOM05D003235 ORTHO05D003863 1.5e-15 87.4 66 51.5
COL.COLO4_24688 Corchorus olitorius HOM05D003235 ORTHO05D003863 3.4e-15 86.3 122 45.9
Nitab4.5_0006796g0050 Nicotiana tabacum HOM05D003235 ORTHO05D003863 1.7e-14 84.0 122 44.3
vmacro20805 Vaccinium macrocarpon HOM05D003235 ORTHO05D003863 7.1e-13 78.6 39 89.7
FAN18G1267 Fragaria x ananassa HOM05D003235 ORTHO05D003863 1.0e-11 74.7 44 75.0
TPR.G8545 Trifolium pratense HOM05D003235 ORTHO05D003863 2.3e-11 73.6 40 75.0
TPR.G24036 Trifolium pratense HOM05D000096 ORTHO05D009933 2.1e-09 67.0 35 85.7
EL10Ac3g05050 Beta vulgaris HOM05D003235 ORTHO05D003863 6.2e-09 65.5 35 77.1
EL10Ac3g05834 Beta vulgaris HOM05D003235 ORTHO05D003863 1.8e-08 63.9 33 84.8
MBI02_g46598_MAGBIO Magnolia biondii HOM05D003235 ORTHO05D003863 2.2e-06 57.0 28 92.9


User provided reference genes

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