Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41849 Davidia involucrata HOM05D006118 ORTHO05D007750 5.2e-153 544.3 260 100.0
Hma1.2p1_0641F.1_g194200 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 2.9e-135 485.3 251 91.6
Hma1.2p1_0641F.1_g194210 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 2.9e-135 485.3 249 91.6
Migut.E01785 Erythranthe guttata HOM05D006118 ORTHO05D007750 2.0e-133 479.2 260 85.0
PGSC0003DMG402012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 1.3e-132 476.5 260 86.9
HanXRQChr09g0261891 Helianthus annuus HOM05D006118 ORTHO05D007750 2.3e-132 475.7 263 84.0
ECA236G0212 Erigeron canadensis HOM05D006118 ORTHO05D007750 5.0e-132 474.6 263 84.0
Solyc08g061260.4 Solanum lycopersicum HOM05D006118 ORTHO05D007750 3.3e-131 471.9 261 86.6
Sopen08g016640 Solanum pennellii HOM05D006118 ORTHO05D007750 3.3e-131 471.9 261 86.6
GSVIVG01035487001 Vitis vinifera HOM05D006118 ORTHO05D007750 3.3e-131 471.9 262 87.8
Thecc.04G313700 Theobroma cacao HOM05D006118 ORTHO05D007750 9.5e-131 470.3 261 86.2
vmacro04115 Vaccinium macrocarpon HOM05D006118 ORTHO05D007750 9.5e-131 470.3 259 86.1
Cc08_g01010 Coffea canephora HOM05D006118 ORTHO05D007750 1.2e-130 469.9 265 83.8
Oeu036787.2 Olea europaea HOM05D006118 ORTHO05D007750 6.8e-129 464.2 262 84.0
MSTRG.14088 Avicennia marina HOM05D006118 ORTHO05D007750 8.9e-129 463.8 260 83.1
Rhsim13G0216900 Rhododendron simsii HOM05D006118 ORTHO05D007750 8.9e-129 463.8 262 85.1
TAR624G0180 Trochodendron aralioides HOM05D006118 ORTHO05D007750 1.5e-128 463.0 261 85.8
CiPaw.16G067300 Carya illinoinensis HOM05D006118 ORTHO05D007750 7.5e-128 460.7 261 84.3
SGA_v2.0_scaffold163G37995 Striga asiatica HOM05D006118 ORTHO05D007750 9.8e-128 460.3 275 81.5
Gorai.005G073100 Gossypium raimondii HOM05D006118 ORTHO05D007750 2.2e-127 459.1 261 83.9
DCAR_003726 Daucus carota HOM05D006118 ORTHO05D007750 2.9e-127 458.8 270 80.4
Gohir.A02G058900 Gossypium hirsutum HOM05D006118 ORTHO05D007750 6.4e-127 457.6 261 83.9
Cpa.g.sc146.16 Carica papaya HOM05D006118 ORTHO05D007750 8.3e-127 457.2 261 84.3
Lsat_1_v5_gn_8_70541 Lactuca sativa HOM05D006118 ORTHO05D007750 8.3e-127 457.2 263 82.1
Gohir.D02G064600 Gossypium hirsutum HOM05D006118 ORTHO05D007750 1.9e-126 456.1 261 83.5
MD08G1073200 Malus domestica HOM05D006118 ORTHO05D007750 2.0e-125 452.6 261 82.4
Eucgr.C00739 Eucalyptus grandis HOM05D006118 ORTHO05D007750 2.7e-125 452.2 259 83.8
arahy.Tifrunner.gnm1.ann1.ZI0SGT Arachis hypogaea HOM05D006118 ORTHO05D007750 1.7e-124 449.5 259 82.2
ClCG05G015850 Citrullus lanatus HOM05D006118 ORTHO05D007750 1.7e-124 449.5 259 81.5
MELO3C016921.2 Cucumis melo HOM05D006118 ORTHO05D007750 2.3e-124 449.1 259 81.5
CsaV3_4G036130 Cucumis sativus L. HOM05D006118 ORTHO05D007750 2.3e-124 449.1 259 81.5
PSO063G1448 Papaver somniferum HOM05D006118 ORTHO05D007750 2.3e-124 449.1 261 82.8
Prupe.1G402500 Prunus persica HOM05D006118 ORTHO05D007750 2.3e-124 449.1 260 81.5
RcHm_v2.0_Chr6g0312021 Rosa chinensis HOM05D006118 ORTHO05D007750 3.0e-124 448.7 261 81.6
PSO421G0086 Papaver somniferum HOM05D006118 ORTHO05D007750 3.9e-124 448.4 261 82.8
Ciclev10005468m.g Citrus clementina HOM05D006118 ORTHO05D007750 5.0e-124 448.0 261 83.1
Sabra08G0153100 Salix brachista HOM05D006118 ORTHO05D007750 1.1e-123 446.8 270 81.1
FvH4_2g30820 Fragaria vesca HOM05D006118 ORTHO05D007750 1.5e-123 446.4 261 81.6
FAN20G1786 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.5e-123 446.4 261 81.6
CSS0045297 Camellia sinensis var. sinensis HOM05D006118 ORTHO05D007750 2.5e-123 445.7 226 92.9
FAN15G2451 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.6e-122 443.0 261 80.8
CANSAT25G1353 Cannabis sativa HOM05D006118 ORTHO05D007750 2.8e-122 442.2 265 82.6
FAN27G1493 Fragaria x ananassa HOM05D006118 ORTHO05D007750 3.6e-122 441.8 261 80.8
Atru.chr4.3167 Acer truncatum HOM05D006118 ORTHO05D007750 1.8e-121 439.5 261 80.8
arahy.Tifrunner.gnm1.ann1.Z643MN Arachis hypogaea HOM05D006118 ORTHO05D007750 1.8e-121 439.5 269 78.8
Aqoxy7G01030 Aquilegia oxysepala HOM05D006118 ORTHO05D007750 2.3e-121 439.1 261 82.0
MD15G1048100 Malus domestica HOM05D006118 ORTHO05D007750 3.1e-121 438.7 261 80.1
Sed0026686 Sechium edule HOM05D006118 ORTHO05D007750 4.0e-121 438.3 258 79.5
Duzib151G0955 Durio zibethinus HOM05D006118 ORTHO05D007750 1.2e-120 436.8 239 86.2
Potri.008G206000 Populus trichocarpa HOM05D006118 ORTHO05D007750 2.0e-120 436.0 287 76.7
Glyma.17G219300 Glycine max HOM05D006118 ORTHO05D007750 3.4e-120 435.3 259 79.5
Ca_13095_v3 Cicer arietinum L. HOM05D006118 ORTHO05D007750 4.4e-120 434.9 261 79.3
Carub.0001s3740 Capsella rubella HOM05D006118 ORTHO05D007750 8.3e-119 430.6 268 78.0
Lj5g0024511 Lotus japonicus HOM05D006118 ORTHO05D007750 8.3e-119 430.6 261 78.2
Phvul.001G044800 Phaseolus vulgaris HOM05D006118 ORTHO05D007750 8.3e-119 430.6 259 78.4
AT1G48270 Arabidopsis thaliana HOM05D006118 ORTHO05D007750 4.1e-118 428.3 268 77.6
FAN24G3410 Fragaria x ananassa HOM05D006118 ORTHO05D007750 4.1e-118 428.3 257 79.8
Manes.03G212200 Manihot esculenta HOM05D006118 ORTHO05D007750 7.1e-118 427.6 261 81.2
AL1G54870 Arabidopsis lyrata HOM05D006118 ORTHO05D007750 1.2e-117 426.8 268 76.9
Oeu024208.1 Olea europaea HOM05D006118 ORTHO05D007750 2.1e-117 426.0 246 82.9
CARHR037890 Cardamine hirsuta HOM05D006118 ORTHO05D007750 1.3e-116 423.3 269 76.6
Sp1g35230 Schrenkiella parvula HOM05D006118 ORTHO05D007750 1.7e-116 422.9 270 75.9
Thhalv10011644m.g Eutrema salsugineum HOM05D006118 ORTHO05D007750 5.1e-116 421.4 270 75.9
Lalb_Chr24g0393681 Lupinus albus HOM05D006118 ORTHO05D007750 1.1e-115 420.2 259 78.4
PGR142G4277 Punica granatum HOM05D006118 ORTHO05D007750 1.1e-115 420.2 259 79.2
BolC6t35406H Brassica oleracea HOM05D006118 ORTHO05D007750 4.3e-115 418.3 269 75.1
BcaB07g33772 Brassica carinata HOM05D006118 ORTHO05D007750 1.2e-114 416.8 270 74.8
BcaC08g43024 Brassica carinata HOM05D006118 ORTHO05D007750 4.7e-114 414.8 270 74.4
A06p04570 Brassica napus HOM05D006118 ORTHO05D007750 4.7e-114 414.8 271 74.5
C06p02770 Brassica napus HOM05D006118 ORTHO05D007750 4.7e-114 414.8 270 74.4
BraA06t23661Z Brassica rapa HOM05D006118 ORTHO05D007750 4.7e-114 414.8 271 74.5
Sc06g0000090 Simmondsia chinensis HOM05D006118 ORTHO05D007750 1.7e-111 406.4 260 76.5
VMungo0647G1968 Vigna mungo HOM05D006118 ORTHO05D007750 2.2e-111 406.0 225 84.0
SalBow1G5335 Salvia bowleyana HOM05D006118 ORTHO05D007750 3.8e-111 405.2 363 59.0
Nitab4.5_0001576g0100 Nicotiana tabacum HOM05D006118 ORTHO05D007750 8.4e-111 404.1 259 78.0
Actinidia01325 Actinidia chinensis HOM05D006118 ORTHO05D007750 3.2e-110 402.1 209 90.0
Glyma.14G107200 Glycine max HOM05D006118 ORTHO05D007750 4.1e-110 401.7 225 83.1
THA.LOC104824720 Tarenaya hassleriana HOM05D006118 ORTHO05D007750 2.5e-107 392.5 265 75.1
CDE06G0461 Ceratophyllum demersum HOM05D006118 ORTHO05D007750 1.4e-105 386.7 243 77.8
COL.COLO4_34509 Corchorus olitorius HOM05D006118 ORTHO05D007750 6.9e-105 384.4 261 73.9
Medtr1g015010 Medicago truncatula HOM05D006118 ORTHO05D007750 3.8e-103 378.6 262 71.8
TWI53G1421 Tripterygium wilfordii HOM05D006118 ORTHO05D007750 8.4e-103 377.5 262 75.2
Os06g0199800 Oryza sativa ssp. japonica HOM05D006118 ORTHO05D007750 4.2e-102 375.2 254 70.1
Psat6g023080 Pisum sativum HOM05D006118 ORTHO05D007750 1.4e-97 360.1 225 77.8
AagrBONN_evm.TU.Sc2ySwM_228.1339 Anthoceros agrestis HOM05D006118 ORTHO05D007750 3.1e-97 359.0 259 67.2
Aa31LG10G5490 Aethionema arabicum HOM05D006118 ORTHO05D007750 4.5e-96 355.1 268 67.9
Peaxi162Scf00486g00116 Petunia axillaris HOM05D006118 ORTHO05D007750 1.7e-95 353.2 260 68.1
AUR62020280 Chenopodium quinoa HOM05D006118 ORTHO05D007750 1.9e-94 349.7 262 69.8
AUR62037725 Chenopodium quinoa HOM05D006118 ORTHO05D007750 1.1e-91 340.5 262 68.3
Mapoly0073s0070 Marchantia polymorpha HOM05D006118 ORTHO05D007750 1.5e-91 340.1 238 67.2
TPR.G38901 Trifolium pratense HOM05D006118 ORTHO05D007750 3.7e-90 335.5 202 77.7
Ah.12g061330 Amaranthus hybridus HOM05D006118 ORTHO05D007750 8.1e-90 334.3 264 65.5
Pp3c15_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 1.7e-87 326.6 255 60.8
Pp3c9_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 7.9e-85 317.8 236 63.6
SMO119G0499 Selaginella moellendorffii HOM05D006118 ORTHO05D007750 1.1e-81 307.4 211 68.7
EL10Ac2g02406 Beta vulgaris HOM05D006118 ORTHO05D007750 2.4e-81 306.2 263 62.0
Haze_18321 Corylus avellana HOM05D006118 ORTHO05D007750 6.9e-81 304.7 535 38.1
Zm00001eb278600 Zea mays HOM05D006118 ORTHO05D007750 7.4e-75 284.6 191 67.5
Hund25545 Selenicereus undatus HOM05D006118 ORTHO05D007750 1.6e-74 283.5 226 65.5
CBR_g36835 Chara braunii HOM05D006118 ORTHO05D007750 2.1e-74 283.1 220 63.2
ATR0598G044 Amborella trichopoda HOM05D006118 ORTHO05D007750 2.5e-70 269.6 155 82.6
HPP92_016236 Vanilla planifolia HOM05D006118 ORTHO05D007750 9.1e-65 251.1 258 53.1
unitig_8.g4842 Utricularia gibba HOM05D006118 ORTHO05D007750 3.8e-63 245.7 156 73.7
arahy.Tifrunner.gnm1.ann1.C1NZN8 Arachis hypogaea HOM05D006118 ORTHO05D007750 1.2e-61 240.7 156 75.0
arahy.Tifrunner.gnm1.ann1.K6H74S Arachis hypogaea HOM05D006118 ORTHO05D007750 1.2e-61 240.7 163 72.4
Lj7A209G43 Lonicera japonica HOM05D006118 ORTHO05D007750 1.6e-61 240.4 178 67.4
Nitab4.5_0009849g0030 Nicotiana tabacum HOM05D006118 ORTHO05D007750 1.7e-58 230.3 162 71.6
BcaB07g32513 Brassica carinata HOM05D006118 ORTHO05D007750 6.7e-52 208.4 178 58.4
BcaB01g01553 Brassica carinata HOM05D006118 ORTHO05D007750 1.1e-51 207.6 148 68.9
BcaB01g03835 Brassica carinata HOM05D006118 ORTHO05D007750 7.4e-51 204.9 138 71.0
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 2.2e-47 193.4 129 74.4
PGSC0003DMG401012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 5.0e-47 192.2 101 84.2
BcaB08g36375 Brassica carinata HOM05D006118 ORTHO05D007750 2.8e-42 176.4 138 65.2
Lalb_Chr23g0268011 Lupinus albus HOM05D006118 ORTHO05D007750 3.7e-42 176.0 101 80.2
Lj7A209G42 Lonicera japonica HOM05D006118 ORTHO05D007750 4.8e-42 175.6 90 90.0
MD15G1048300 Malus domestica HOM05D006118 ORTHO05D007750 1.1e-38 164.5 156 54.5
ATR0684G160 Amborella trichopoda HOM05D006118 ORTHO05D007750 3.7e-34 149.4 95 76.8
SEGI_23264 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 8.0e-29 131.7 80 78.8
PRCOL_00004868 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 3.7e-26 122.9 204 36.8
PRCOL_00005697 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 1.0e-20 104.8 217 30.4
MCO03G156 Micromonas commoda HOM05D006118 ORTHO05D007750 7.3e-14 82.0 297 25.9
Lalb_Chr23g0268021 Lupinus albus HOM05D006118 ORTHO05D007750 1.6e-13 80.9 46 82.6
MD15G1048200 Malus domestica HOM05D006118 ORTHO05D007750 6.4e-10 68.9 50 72.0
SEGI_18851 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 8.3e-10 68.6 59 59.3
MSTRG.1710 Avicennia marina HOM05D006118 ORTHO05D007750 7.3e-06 55.5 69 46.4


User provided reference genes

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