Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41829 Davidia involucrata HOM05D000448 ORTHO05D000291 4.0e-64 248.4 179 100.0
Eucgr.C03604 Eucalyptus grandis HOM05D000448 ORTHO05D000291 2.9e-14 82.8 143 59.4
Ah.16g105930 Amaranthus hybridus HOM05D000448 ORTHO05D000291 1.9e-13 80.1 159 44.0
Hma1.2p1_0149F.1_g066290 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 4.2e-13 79.0 165 60.0
Sc10g0008830 Simmondsia chinensis HOM05D000448 ORTHO05D000291 9.4e-13 77.8 85 45.9
Cc08_g01420 Coffea canephora HOM05D000448 ORTHO05D000291 1.2e-12 77.4 163 46.0
Ciclev10008164m.g Citrus clementina HOM05D000448 ORTHO05D000291 3.6e-12 75.9 91 50.5
Cpa.g.sc277.5 Carica papaya HOM05D000448 ORTHO05D000291 4.7e-12 75.5 167 39.5
CSS0018902 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 6.1e-12 75.1 104 43.3
Sopen08g017860 Solanum pennellii HOM05D000448 ORTHO05D000291 8.0e-12 74.7 102 39.2
Oeu018032.1 Olea europaea HOM05D000448 ORTHO05D000291 1.0e-11 74.3 67 47.8
Atru.chr2.622 Acer truncatum HOM05D000448 ORTHO05D000291 1.8e-11 73.6 88 44.3
Eucgr.C03587 Eucalyptus grandis HOM05D000448 ORTHO05D000291 3.0e-11 72.8 140 33.6
Eucgr.L00453 Eucalyptus grandis HOM05D000448 ORTHO05D000291 3.0e-11 72.8 67 49.3
AUR62031816 Chenopodium quinoa HOM05D000448 ORTHO05D000291 4.0e-11 72.4 84 41.7
Cpa.g.sc277.6 Carica papaya HOM05D000448 ORTHO05D000291 5.2e-11 72.0 170 38.8
HanXRQChr12g0358821 Helianthus annuus HOM05D000448 ORTHO05D000291 5.2e-11 72.0 70 47.1
Prupe.1G407000 Prunus persica HOM05D000448 ORTHO05D000291 6.8e-11 71.6 90 41.1
Hma1.2p1_0231F.1_g097550 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 8.8e-11 71.2 164 45.1
Cc02_g31560 Coffea canephora HOM05D000448 ORTHO05D000291 1.2e-10 70.9 163 43.6
Eucgr.L00448 Eucalyptus grandis HOM05D000448 ORTHO05D000291 1.2e-10 70.9 143 41.3
Solyc08g062330.3 Solanum lycopersicum HOM05D000448 ORTHO05D000291 1.5e-10 70.5 102 37.3
Actinidia03310 Actinidia chinensis HOM05D000448 ORTHO05D000291 2.0e-10 70.1 161 43.5
Ciclev10003826m.g Citrus clementina HOM05D000448 ORTHO05D000291 3.4e-10 69.3 84 42.9
vmacro03791 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 3.4e-10 69.3 177 51.4
ECA234G0709 Erigeron canadensis HOM05D000448 ORTHO05D000291 4.4e-10 68.9 71 45.1
Thecc.09G133100 Theobroma cacao HOM05D000448 ORTHO05D000291 4.4e-10 68.9 89 38.2
TAR311G0004 Trochodendron aralioides HOM05D000448 ORTHO05D000291 4.4e-10 68.9 102 44.1
Hma1.2p1_2573F.1_g324636 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 5.7e-10 68.6 144 38.2
Hma1.2p1_2573F.1_g324650 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 5.7e-10 68.6 144 38.2
Nn1g04194 Nelumbo nucifera HOM05D000448 ORTHO05D000291 5.7e-10 68.6 89 40.4
Migut.I00414 Erythranthe guttata HOM05D000448 ORTHO05D000291 7.5e-10 68.2 208 34.1
RcHm_v2.0_Chr6g0311481 Rosa chinensis HOM05D000448 ORTHO05D000291 7.5e-10 68.2 90 38.9
Thecc.09G132900 Theobroma cacao HOM05D000448 ORTHO05D000291 9.8e-10 67.8 89 37.1
Actinidia25704 Actinidia chinensis HOM05D000448 ORTHO05D000291 1.3e-09 67.4 91 41.8
FAN15G2979 Fragaria x ananassa HOM05D000448 ORTHO05D000291 1.7e-09 67.0 96 39.6
Hma1.2p1_0196F.1_g085070 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 1.7e-09 67.0 165 40.6
Oeu034188.1 Olea europaea HOM05D000448 ORTHO05D000291 1.7e-09 67.0 74 43.2
PSO782G3117 Papaver somniferum HOM05D000448 ORTHO05D000291 2.2e-09 66.6 89 52.8
CSS0011908 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 2.8e-09 66.2 94 44.7
FAN27G1920 Fragaria x ananassa HOM05D000448 ORTHO05D000291 2.8e-09 66.2 86 40.7
RcHm_v2.0_Chr2g0094191 Rosa chinensis HOM05D000448 ORTHO05D000291 2.8e-09 66.2 89 41.6
Eucgr.C00683 Eucalyptus grandis HOM05D000448 ORTHO05D000291 3.7e-09 65.9 75 44.0
Sc23g0005320 Simmondsia chinensis HOM05D000448 ORTHO05D000291 3.7e-09 65.9 190 40.5
TAR383G0435 Trochodendron aralioides HOM05D000454 ORTHO05D002637 3.7e-09 65.9 89 39.3
Actinidia01028 Actinidia chinensis HOM05D000480 ORTHO05D000313 4.9e-09 65.5 171 26.9
HanXRQChr12g0358831 Helianthus annuus HOM05D000448 ORTHO05D000291 4.9e-09 65.5 70 51.4
vmacro03794 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 4.9e-09 65.5 141 56.7
Nn6g35571 Nelumbo nucifera HOM05D000448 ORTHO05D000291 6.3e-09 65.1 91 38.5
CANSAT25G3158 Cannabis sativa HOM05D000448 ORTHO05D000291 8.3e-09 64.7 169 39.6
Eucgr.L00452 Eucalyptus grandis HOM05D000448 ORTHO05D000291 8.3e-09 64.7 67 43.3
PSO063G0367 Papaver somniferum HOM05D000480 ORTHO05D000313 8.3e-09 64.7 175 38.3
PSO478G0034 Papaver somniferum HOM05D000448 ORTHO05D000291 8.3e-09 64.7 158 31.6
MSTRG.12046 Avicennia marina HOM05D000448 ORTHO05D000291 1.1e-08 64.3 75 45.3
AUR62008891 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.4e-08 63.9 84 39.3
FAN15G3761 Fragaria x ananassa HOM05D000448 ORTHO05D000291 1.4e-08 63.9 75 42.7
Hma1.2p1_2573F.1_g324643 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 1.4e-08 63.9 140 37.9
Sabra06G0172800 Salix brachista HOM05D000448 ORTHO05D000291 1.4e-08 63.9 81 39.5
CANSAT25G2897 Cannabis sativa HOM05D000448 ORTHO05D000291 1.8e-08 63.5 89 46.1
Migut.A00096 Erythranthe guttata HOM05D000448 ORTHO05D000291 1.8e-08 63.5 78 41.0
Eucgr.C00680 Eucalyptus grandis HOM05D000448 ORTHO05D000291 1.8e-08 63.5 75 42.7
PGR044G2433 Punica granatum HOM05D000448 ORTHO05D000291 1.8e-08 63.5 82 46.3
CiPaw.15G088600 Carya illinoinensis HOM05D000448 ORTHO05D000291 2.4e-08 63.2 90 37.8
Ciclev10009252m.g Citrus clementina HOM05D000448 ORTHO05D000291 2.4e-08 63.2 94 46.8
COL.COLO4_35169 Corchorus olitorius HOM05D000448 ORTHO05D000291 2.4e-08 63.2 87 36.8
Duzib168G1606 Durio zibethinus HOM05D000448 ORTHO05D000291 2.4e-08 63.2 87 37.9
HanXRQChr16g0523061 Helianthus annuus HOM05D000448 ORTHO05D000291 2.4e-08 63.2 167 40.1
Hma1.2p1_2573F.1_g324630 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 2.4e-08 63.2 89 49.4
Lsat_1_v5_gn_5_78720 Lactuca sativa HOM05D000448 ORTHO05D000291 2.4e-08 63.2 90 41.1
PSO781G0012 Papaver somniferum HOM05D000448 ORTHO05D000291 2.4e-08 63.2 103 39.8
QL02p061382 Quercus lobata HOM05D000448 ORTHO05D000291 2.4e-08 63.2 90 38.9
GSVIVG01015126001 Vitis vinifera HOM05D000448 ORTHO05D000291 2.4e-08 63.2 89 36.0
Ah.16g105920 Amaranthus hybridus HOM05D000448 ORTHO05D000291 3.1e-08 62.8 148 58.8
Cc08_g01410 Coffea canephora HOM05D000448 ORTHO05D000291 3.1e-08 62.8 163 50.9
FvH4_2g31340 Fragaria vesca HOM05D000448 ORTHO05D000291 3.1e-08 62.8 75 41.3
FAN20G0495 Fragaria x ananassa HOM05D000448 ORTHO05D000291 3.1e-08 62.8 75 41.3
FAN24G3054 Fragaria x ananassa HOM05D000448 ORTHO05D000291 3.1e-08 62.8 75 41.3
Hma1.2p1_2512F.1_g323650 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 4.1e-08 62.4 89 49.4
Sc06g0006700 Simmondsia chinensis HOM05D000448 ORTHO05D000291 4.1e-08 62.4 96 39.6
AUR62009260 Chenopodium quinoa HOM05D000448 ORTHO05D000291 5.4e-08 62.0 162 53.1
AUR62042449 Chenopodium quinoa HOM05D000448 ORTHO05D000291 5.4e-08 62.0 162 54.3
Migut.C00513 Erythranthe guttata HOM05D000448 ORTHO05D000291 5.4e-08 62.0 185 48.1
Eucgr.C03388 Eucalyptus grandis HOM05D000448 ORTHO05D000291 5.4e-08 62.0 143 60.1
PSO478G0673 Papaver somniferum HOM05D000448 ORTHO05D000291 5.4e-08 62.0 165 34.5
TAR628G1068 Trochodendron aralioides HOM05D000448 ORTHO05D000291 5.4e-08 62.0 102 42.2
AUR62009245 Chenopodium quinoa HOM05D000448 ORTHO05D000291 7.0e-08 61.6 66 43.9
Ciclev10007796m.g Citrus clementina HOM05D000454 ORTHO05D002637 7.0e-08 61.6 89 41.6
Hma1.2p1_0732F.1_g210020 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 7.0e-08 61.6 81 50.6
MD08G1068900 Malus domestica HOM05D000448 ORTHO05D000291 7.0e-08 61.6 90 40.0
MD15G1053400 Malus domestica HOM05D000448 ORTHO05D000291 7.0e-08 61.6 87 36.8
PSO384G2515 Papaver somniferum HOM05D000448 ORTHO05D000291 7.0e-08 61.6 124 35.5
PSO566G0187 Papaver somniferum HOM05D000454 ORTHO05D002637 7.0e-08 61.6 89 38.2
PSO782G3005 Papaver somniferum HOM05D000454 ORTHO05D002637 7.0e-08 61.6 89 38.2
CANSAT25G2827 Cannabis sativa HOM05D000448 ORTHO05D000291 9.1e-08 61.2 90 47.8
Cc08_g01450 Coffea canephora HOM05D000448 ORTHO05D000291 9.1e-08 61.2 170 37.6
Migut.A00095 Erythranthe guttata HOM05D000448 ORTHO05D000291 9.1e-08 61.2 90 42.2
Eucgr.C00686 Eucalyptus grandis HOM05D000448 ORTHO05D000291 9.1e-08 61.2 75 49.3
CSS0011346 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 1.2e-07 60.8 195 28.2
Migut.A00098 Erythranthe guttata HOM05D000448 ORTHO05D000291 1.2e-07 60.8 72 43.1
Sc23g0005360 Simmondsia chinensis HOM05D000448 ORTHO05D000291 1.2e-07 60.8 151 37.7
Oeu000707.1 Olea europaea HOM05D000448 ORTHO05D000291 1.6e-07 60.5 78 39.7
Oeu047502.1 Olea europaea HOM05D000448 ORTHO05D000291 1.6e-07 60.5 167 32.3
AUR62043842 Chenopodium quinoa HOM05D000448 ORTHO05D000291 2.0e-07 60.1 162 53.1
Eucgr.L02370 Eucalyptus grandis HOM05D000448 ORTHO05D000291 2.0e-07 60.1 75 49.3
Nn1g04187 Nelumbo nucifera HOM05D000448 ORTHO05D000291 2.0e-07 60.1 82 39.0
PGR044G1992 Punica granatum HOM05D000448 ORTHO05D000291 2.0e-07 60.1 80 35.0
Eucgr.C03608 Eucalyptus grandis HOM05D000448 ORTHO05D000291 2.7e-07 59.7 67 50.7
MBI18_g43125_MAGBIO Magnolia biondii HOM05D000454 ORTHO05D002637 2.7e-07 59.7 69 44.9
PGSC0003DMG400012067 Solanum tuberosum HOM05D000454 ORTHO05D002637 2.7e-07 59.7 168 48.8
GSVIVG01035638001 Vitis vinifera HOM05D000454 ORTHO05D002637 2.7e-07 59.7 165 50.9
MSTRG.10528 Avicennia marina HOM05D000448 ORTHO05D000291 3.5e-07 59.3 89 37.1
COL.COLO4_18654 Corchorus olitorius HOM05D000454 ORTHO05D002637 3.5e-07 59.3 89 40.4
ECA234G0126 Erigeron canadensis HOM05D000448 ORTHO05D000291 3.5e-07 59.3 69 49.3
Lsat_1_v5_gn_1_47140 Lactuca sativa HOM05D000454 ORTHO05D002637 3.5e-07 59.3 89 39.3
Oeu050630.1 Olea europaea HOM05D000448 ORTHO05D000291 3.5e-07 59.3 78 46.2
QL02p061270 Quercus lobata HOM05D000448 ORTHO05D000291 3.5e-07 59.3 90 42.2
Thecc.09G059700 Theobroma cacao HOM05D000448 ORTHO05D000291 3.5e-07 59.3 90 33.3
TAR636G1885 Trochodendron aralioides HOM05D000448 ORTHO05D000291 3.5e-07 59.3 102 40.2
AUR62043586 Chenopodium quinoa HOM05D000448 ORTHO05D000291 4.5e-07 58.9 158 43.0
AUR62043857 Chenopodium quinoa HOM05D000448 ORTHO05D000291 4.5e-07 58.9 158 43.0
PGR044G0504 Punica granatum HOM05D000448 ORTHO05D000291 4.5e-07 58.9 94 39.4
Sc23g0005330 Simmondsia chinensis HOM05D000448 ORTHO05D000291 4.5e-07 58.9 151 41.7
Thecc.09G043600 Theobroma cacao HOM05D000454 ORTHO05D002637 4.5e-07 58.9 89 41.6
Eucgr.C03399 Eucalyptus grandis HOM05D000448 ORTHO05D000291 5.9e-07 58.5 143 32.9
AUR62041976 Chenopodium quinoa HOM05D000448 ORTHO05D000291 7.7e-07 58.2 124 61.3
Cc06_g19850 Coffea canephora HOM05D000448 ORTHO05D000291 7.7e-07 58.2 88 36.4
Duzib150G0219 Durio zibethinus HOM05D000448 ORTHO05D000291 7.7e-07 58.2 73 41.1
Gorai.010G097700 Gossypium raimondii HOM05D000448 ORTHO05D000291 7.7e-07 58.2 98 37.8
CSS0028482 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 1.0e-06 57.8 96 35.4
Ciclev10003092m.g Citrus clementina HOM05D000448 ORTHO05D000291 1.0e-06 57.8 80 38.8
Migut.L01539 Erythranthe guttata HOM05D000448 ORTHO05D000291 1.0e-06 57.8 150 38.7
HanXRQChr11g0352041 Helianthus annuus HOM05D000454 ORTHO05D002637 1.0e-06 57.8 89 40.4
HanXRQChr16g0523041 Helianthus annuus HOM05D000448 ORTHO05D000291 1.0e-06 57.8 167 37.7
SalBow3G2035 Salvia bowleyana HOM05D000448 ORTHO05D000291 1.0e-06 57.8 172 28.5
Actinidia03546 Actinidia chinensis HOM05D000448 ORTHO05D000291 1.3e-06 57.4 93 35.5
Actinidia29316 Actinidia chinensis HOM05D000448 ORTHO05D000291 1.3e-06 57.4 93 35.5
CSS0025223 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 1.3e-06 57.4 96 35.4
CiPaw.04G146800 Carya illinoinensis HOM05D000448 ORTHO05D000291 1.3e-06 57.4 90 36.7
Nn3g18151 Nelumbo nucifera HOM05D000454 ORTHO05D002637 1.3e-06 57.4 88 39.8
Peaxi162Scf00565g00821 Petunia axillaris HOM05D000448 ORTHO05D000291 1.3e-06 57.4 80 37.5
Rhsim07G0188200 Rhododendron simsii HOM05D000448 ORTHO05D000291 1.3e-06 57.4 71 38.0
Atru.chr7.1898 Acer truncatum HOM05D000448 ORTHO05D000291 1.7e-06 57.0 66 53.0
AUR62044748 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.7e-06 57.0 126 61.1
Haze_18135 Corylus avellana HOM05D000448 ORTHO05D000291 1.7e-06 57.0 120 61.7
QL02p000380 Quercus lobata HOM05D000448 ORTHO05D000291 1.7e-06 57.0 87 35.6
Eucgr.C03379 Eucalyptus grandis HOM05D000448 ORTHO05D000291 2.3e-06 56.6 142 60.6
Eucgr.C03572 Eucalyptus grandis HOM05D000448 ORTHO05D000291 2.3e-06 56.6 142 60.6
SalBow4G3166 Salvia bowleyana HOM05D000448 ORTHO05D000291 2.3e-06 56.6 72 37.5
Actinidia27564 Actinidia chinensis HOM05D000448 ORTHO05D000291 2.9e-06 56.2 82 46.3
CSS0043523 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 2.9e-06 56.2 94 40.4
Ciclev10007811m.g Citrus clementina HOM05D000454 ORTHO05D002637 2.9e-06 56.2 67 46.3
Eucgr.C03594 Eucalyptus grandis HOM05D000448 ORTHO05D000291 2.9e-06 56.2 94 39.4
Eucgr.L02912 Eucalyptus grandis HOM05D000448 ORTHO05D000291 2.9e-06 56.2 86 34.9
Rhsim05G0013100 Rhododendron simsii HOM05D000448 ORTHO05D000291 2.9e-06 56.2 74 40.5
RcHm_v2.0_Chr2g0094201 Rosa chinensis HOM05D000448 ORTHO05D000291 2.9e-06 56.2 89 43.8
TWI34G0381 Tripterygium wilfordii HOM05D000454 ORTHO05D002637 2.9e-06 56.2 89 38.2
AUR62043845 Chenopodium quinoa HOM05D000448 ORTHO05D000291 3.8e-06 55.8 150 29.3
Lj8C490T2 Lonicera japonica HOM05D000448 ORTHO05D000291 3.8e-06 55.8 70 40.0
MBI04_g02615_MAGBIO Magnolia biondii HOM05D000454 ORTHO05D002637 3.8e-06 55.8 67 40.3
TAR121G0001 Trochodendron aralioides HOM05D000448 ORTHO05D000291 3.8e-06 55.8 82 36.6
COL.COLO4_21112 Corchorus olitorius HOM05D000448 ORTHO05D000291 5.0e-06 55.5 74 33.8
Eucgr.C00697 Eucalyptus grandis HOM05D000448 ORTHO05D000291 5.0e-06 55.5 75 46.7
FvH4_2g31310 Fragaria vesca HOM05D000448 ORTHO05D000291 5.0e-06 55.5 70 42.9
PGR044G0759 Punica granatum HOM05D000448 ORTHO05D000291 5.0e-06 55.5 94 37.2
CAN.G311.136 Capsicum annuum HOM05D000448 ORTHO05D000291 6.6e-06 55.1 74 41.9
Nn3g18158 Nelumbo nucifera HOM05D000454 ORTHO05D002637 6.6e-06 55.1 77 37.7
CiPaw.04G072700 Carya illinoinensis HOM05D000448 ORTHO05D000291 8.6e-06 54.7 92 35.9
Eucgr.C03074 Eucalyptus grandis HOM05D000448 ORTHO05D000291 8.6e-06 54.7 86 33.7
vmacro10493 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 8.6e-06 54.7 167 50.9


User provided reference genes

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