Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41808 Davidia involucrata HOM05D001176 ORTHO05D007019 2.5e-145 518.8 276 100.0
Actinidia01255 Actinidia chinensis HOM05D001176 ORTHO05D007019 1.6e-131 473.0 270 89.3
CSS0027781 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 1.6e-131 473.0 270 89.6
HanXRQChr03g0068151 Helianthus annuus HOM05D001176 ORTHO05D007019 1.7e-130 469.5 270 88.1
Lsat_1_v5_gn_9_124460 Lactuca sativa HOM05D001176 ORTHO05D007019 2.2e-130 469.2 270 88.5
TAR375G1104 Trochodendron aralioides HOM05D001176 ORTHO05D007019 2.5e-129 465.7 268 87.7
Oeu039635.2 Olea europaea HOM05D001176 ORTHO05D007019 7.2e-129 464.2 270 86.3
Cc08_g05630 Coffea canephora HOM05D001176 ORTHO05D007019 6.1e-128 461.1 270 87.4
GSVIVG01013198001 Vitis vinifera HOM05D001176 ORTHO05D007019 8.0e-128 460.7 268 87.7
Lj9C202G6 Lonicera japonica HOM05D001176 ORTHO05D007019 1.0e-127 460.3 270 87.0
Manes.15G189800 Manihot esculenta HOM05D001176 ORTHO05D007019 1.8e-127 459.5 270 86.7
MBI04_g37458_MAGBIO Magnolia biondii HOM05D001176 ORTHO05D007019 2.3e-127 459.1 264 88.3
Aqoxy7G00899 Aquilegia oxysepala HOM05D001176 ORTHO05D007019 3.0e-127 458.8 264 87.9
AUR62015049 Chenopodium quinoa HOM05D001176 ORTHO05D007019 3.0e-127 458.8 267 86.1
Nitab4.5_0000030g0410 Nicotiana tabacum HOM05D001176 ORTHO05D007019 4.0e-127 458.4 265 88.3
SalBow4G1488 Salvia bowleyana HOM05D001176 ORTHO05D007019 1.5e-126 456.4 270 85.6
AUR62017508 Chenopodium quinoa HOM05D001176 ORTHO05D007019 2.0e-126 456.1 267 85.4
Nitab4.5_0001333g0050 Nicotiana tabacum HOM05D001176 ORTHO05D007019 2.0e-126 456.1 265 87.9
EL10Ac5g11241 Beta vulgaris HOM05D001176 ORTHO05D007019 1.7e-125 453.0 267 85.4
COL.COLO4_11286 Corchorus olitorius HOM05D001176 ORTHO05D007019 1.7e-125 453.0 268 85.1
Nn1g09379 Nelumbo nucifera HOM05D001176 ORTHO05D007019 2.2e-125 452.6 265 86.4
Migut.A00530 Erythranthe guttata HOM05D001176 ORTHO05D007019 6.3e-125 451.1 270 85.6
Rhsim11G0036600 Rhododendron simsii HOM05D001176 ORTHO05D007019 8.3e-125 450.7 315 77.8
CAN.G930.8 Capsicum annuum HOM05D001176 ORTHO05D007019 1.4e-124 449.9 265 86.4
ECA240G2428 Erigeron canadensis HOM05D001176 ORTHO05D007019 2.4e-124 449.1 270 83.7
DCAR_001483 Daucus carota HOM05D001176 ORTHO05D007019 3.1e-124 448.7 267 85.4
Sc21g0000770 Simmondsia chinensis HOM05D001176 ORTHO05D007019 4.1e-124 448.4 268 85.1
MSTRG.25741 Avicennia marina HOM05D001176 ORTHO05D007019 9.1e-124 447.2 270 83.3
Lj2g0027044 Lotus japonicus HOM05D001176 ORTHO05D007019 9.1e-124 447.2 271 85.6
Eucgr.D02557 Eucalyptus grandis HOM05D001176 ORTHO05D007019 1.2e-123 446.8 264 85.6
Solyc08g075440.4 Solanum lycopersicum HOM05D001176 ORTHO05D007019 1.2e-123 446.8 265 85.3
Sopen08g024070 Solanum pennellii HOM05D001176 ORTHO05D007019 1.2e-123 446.8 265 85.3
Ciclev10011152m.g Citrus clementina HOM05D001176 ORTHO05D007019 2.0e-123 446.0 268 84.0
Atru.chr8.2633 Acer truncatum HOM05D001176 ORTHO05D007019 2.7e-123 445.7 267 84.6
CiPaw.11G075700 Carya illinoinensis HOM05D001176 ORTHO05D007019 2.7e-123 445.7 268 84.3
Ca_25034_v3 Cicer arietinum L. HOM05D001176 ORTHO05D007019 2.7e-123 445.7 271 85.2
Duzib205G1840 Durio zibethinus HOM05D001176 ORTHO05D007019 2.7e-123 445.7 267 84.3
PSO732G0580 Papaver somniferum HOM05D001176 ORTHO05D007019 2.7e-123 445.7 264 85.6
Sed0008250 Sechium edule HOM05D001176 ORTHO05D007019 2.7e-123 445.7 271 84.9
Haze_02517 Corylus avellana HOM05D001176 ORTHO05D007019 3.5e-123 445.3 268 84.0
ATR0665G266 Amborella trichopoda HOM05D001176 ORTHO05D007019 4.5e-123 444.9 264 86.4
VMungo1215G1610 Vigna mungo HOM05D001176 ORTHO05D007019 5.9e-123 444.5 271 85.6
Glyma.11G090100 Glycine max HOM05D001176 ORTHO05D007019 7.7e-123 444.1 271 85.6
Medtr5g025410 Medicago truncatula HOM05D001176 ORTHO05D007019 7.7e-123 444.1 271 85.2
Thecc.03G318700 Theobroma cacao HOM05D001176 ORTHO05D007019 1.3e-122 443.4 267 83.5
Gohir.D08G170700 Gossypium hirsutum HOM05D001176 ORTHO05D007019 1.7e-122 443.0 267 83.1
Gohir.D08G170800 Gossypium hirsutum HOM05D001176 ORTHO05D007019 1.7e-122 443.0 267 83.1
Gorai.004G178200 Gossypium raimondii HOM05D001176 ORTHO05D007019 1.7e-122 443.0 267 83.1
Potri.004G236600 Populus trichocarpa HOM05D001176 ORTHO05D007019 1.7e-122 443.0 270 82.6
PSO675G7478 Papaver somniferum HOM05D001176 ORTHO05D007019 2.3e-122 442.6 264 85.2
Psat2g146720 Pisum sativum HOM05D001176 ORTHO05D007019 2.3e-122 442.6 271 84.5
Prupe.1G077200 Prunus persica HOM05D001176 ORTHO05D007019 2.9e-122 442.2 267 83.9
PGR031G2625 Punica granatum HOM05D001176 ORTHO05D007019 5.0e-122 441.4 264 83.7
Phvul.002G121100 Phaseolus vulgaris HOM05D001176 ORTHO05D007019 6.5e-122 441.0 271 85.6
RcHm_v2.0_Chr6g0304421 Rosa chinensis HOM05D001176 ORTHO05D007019 1.1e-121 440.3 266 83.1
Lalb_Chr16g0380331 Lupinus albus HOM05D001176 ORTHO05D007019 5.5e-121 438.0 271 83.8
FAN15G1703 Fragaria x ananassa HOM05D001176 ORTHO05D007019 7.2e-121 437.6 264 83.0
FAN27G0701 Fragaria x ananassa HOM05D001176 ORTHO05D007019 7.2e-121 437.6 264 83.0
HPP92_018761 Vanilla planifolia HOM05D001176 ORTHO05D007019 7.2e-121 437.6 268 82.1
FvH4_2g37280 Fragaria vesca HOM05D001176 ORTHO05D007019 9.5e-121 437.2 264 83.0
MD13G1244000 Malus domestica HOM05D001176 ORTHO05D007019 1.2e-120 436.8 267 82.0
Gohir.A08G149700 Gossypium hirsutum HOM05D001176 ORTHO05D007019 1.6e-120 436.4 267 82.4
AL1G45850 Arabidopsis lyrata HOM05D001176 ORTHO05D007019 2.8e-120 435.6 270 81.1
Ah.05g167880 Amaranthus hybridus HOM05D001176 ORTHO05D007019 3.6e-120 435.3 304 74.3
Lalb_Chr09g0324961 Lupinus albus HOM05D001176 ORTHO05D007019 3.6e-120 435.3 271 83.4
Carub.0001s3008 Capsella rubella HOM05D001176 ORTHO05D007019 6.1e-120 434.5 270 80.7
FAN20G0920 Fragaria x ananassa HOM05D001176 ORTHO05D007019 6.1e-120 434.5 264 82.6
AT1G31780 Arabidopsis thaliana HOM05D001176 ORTHO05D007019 8.0e-120 434.1 270 80.7
Aa31LG2G14290 Aethionema arabicum HOM05D001176 ORTHO05D007019 1.4e-119 433.3 270 80.7
Thhalv10006980m.g Eutrema salsugineum HOM05D001176 ORTHO05D007019 1.4e-119 433.3 270 80.7
ClCG11G016030 Citrullus lanatus HOM05D001176 ORTHO05D007019 1.8e-119 433.0 271 83.0
CsaV3_4G027950 Cucumis sativus L. HOM05D001176 ORTHO05D007019 2.3e-119 432.6 271 83.0
CARHR031080 Cardamine hirsuta HOM05D001176 ORTHO05D007019 3.0e-119 432.2 270 80.4
THA.LOC104798522 Tarenaya hassleriana HOM05D001176 ORTHO05D007019 1.5e-118 429.9 270 80.0
CDE04G2738 Ceratophyllum demersum HOM05D001176 ORTHO05D007019 5.7e-118 427.9 265 81.5
SEGI_32977 Sequoiadendron giganteum HOM05D001176 ORTHO05D007019 7.5e-118 427.6 264 81.8
MELO3C010519.2 Cucumis melo HOM05D001176 ORTHO05D007019 1.7e-117 426.4 272 82.7
Sp1g27470 Schrenkiella parvula HOM05D001176 ORTHO05D007019 2.4e-116 422.5 270 78.1
TWI79G0428 Tripterygium wilfordii HOM05D001176 ORTHO05D007019 9.2e-116 420.6 268 81.3
BcaB07g32825 Brassica carinata HOM05D001176 ORTHO05D007019 1.6e-115 419.9 270 77.4
BcaC05g27192 Brassica carinata HOM05D001176 ORTHO05D007019 5.9e-115 417.9 270 77.4
A09p34570 Brassica napus HOM05D001176 ORTHO05D007019 5.9e-115 417.9 270 77.4
C05p30980 Brassica napus HOM05D001176 ORTHO05D007019 5.9e-115 417.9 270 77.4
BolC5t31821H Brassica oleracea HOM05D001176 ORTHO05D007019 5.9e-115 417.9 270 77.4
BraA09t38996Z Brassica rapa HOM05D001176 ORTHO05D007019 5.9e-115 417.9 270 77.4
Zm00001eb009310 Zea mays HOM05D001176 ORTHO05D007019 7.8e-115 417.5 265 80.4
unitig_748.g7392 Utricularia gibba HOM05D001176 ORTHO05D007019 1.9e-113 412.9 270 79.6
Sabra01G0180800 Salix brachista HOM05D001176 ORTHO05D007019 3.3e-113 412.1 270 78.1
SGA_v2.0_scaffold96G29093 Striga asiatica HOM05D001176 ORTHO05D007019 3.6e-112 408.7 376 60.9
Peaxi162Scf00193g00811 Petunia axillaris HOM05D001176 ORTHO05D007019 1.0e-111 407.1 265 80.8
Mapoly0009s0222 Marchantia polymorpha HOM05D001176 ORTHO05D007019 2.6e-110 402.5 264 76.5
Cpa.g.sc90.31 Carica papaya HOM05D001176 ORTHO05D007019 3.4e-110 402.1 267 76.8
SMO339G0033 Selaginella moellendorffii HOM05D001176 ORTHO05D007019 3.2e-108 395.6 270 74.4
Pp3c2_23210 Physcomitrium patens HOM05D001176 ORTHO05D007019 1.0e-106 390.6 267 73.4
TPR.G8989 Trifolium pratense HOM05D001176 ORTHO05D007019 1.8e-103 379.8 222 87.8
PRCOL_00001869 Prasinoderma coloniale HOM05D001176 ORTHO05D007019 4.9e-85 318.5 265 61.1
AagrBONN_evm.TU.Sc2ySwM_362.2951 Anthoceros agrestis HOM05D001176 ORTHO05D007019 4.6e-83 312.0 197 78.2
QL12p003889 Quercus lobata HOM05D001176 ORTHO05D007019 1.5e-81 307.0 197 81.7
vmacro00085 Vaccinium macrocarpon HOM05D001176 ORTHO05D007019 1.8e-79 300.1 295 60.3
MCO03G158 Micromonas commoda HOM05D001176 ORTHO05D007019 2.2e-77 293.1 267 56.6
Actinidia32787 Actinidia chinensis HOM05D001176 ORTHO05D007019 2.9e-77 292.7 242 66.5
Oeu014108.2 Olea europaea HOM05D001176 ORTHO05D007019 1.4e-71 273.9 346 50.3
Cre13.g587750 Chlamydomonas reinhardtii HOM05D001176 ORTHO05D007019 9.0e-71 271.2 268 56.7
Hund16023 Selenicereus undatus HOM05D001176 ORTHO05D007019 1.8e-66 256.9 201 71.1
CDE07G2068 Ceratophyllum demersum HOM05D004834 ORTHO05D006247 1.8e-63 246.9 172 75.6
CBR_g61501 Chara braunii HOM05D001176 ORTHO05D007019 1.7e-61 240.4 167 72.5
CSS0004945 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 5.5e-60 235.3 241 58.5
CSS0012136 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 8.2e-56 221.5 258 52.7
MD13G1243800 Malus domestica HOM05D001176 ORTHO05D007019 2.6e-46 189.9 93 94.6
arahy.Tifrunner.gnm1.ann1.7XHH75 Arachis hypogaea HOM05D001176 ORTHO05D007019 8.8e-42 174.9 143 69.2
arahy.Tifrunner.gnm1.ann1.V0K3WG Arachis hypogaea HOM05D001176 ORTHO05D007019 8.8e-42 174.9 143 69.2
PGSC0003DMG400001956 Solanum tuberosum HOM05D001176 ORTHO05D007019 7.4e-41 171.8 84 94.0
Glyma.01G154450 Glycine max HOM05D001176 ORTHO05D007019 2.5e-36 156.8 125 72.0
Cc07_g20650 Coffea canephora HOM05D001176 ORTHO05D007019 1.4e-26 124.4 84 73.8
TPR.G11479 Trifolium pratense HOM05D001176 ORTHO05D007019 1.8e-15 87.4 56 82.1
CBR_g61503 Chara braunii HOM05D001176 ORTHO05D007019 9.1e-07 58.5 29 86.2
Glyma.01G154501 Glycine max HOM05D001176 ORTHO05D007019 1.2e-06 58.2 26 100.0
CSS0030107 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 2.0e-06 57.4 26 96.2


User provided reference genes

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