Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41766 Davidia involucrata HOM05D008239 ORTHO05D009800 0.0e+00 1763.8 904 100.0
Dinv41765 Davidia involucrata HOM05D008239 ORTHO05D009800 7.5e-66 256.5 463 38.4
Dinv25443 Davidia involucrata HOM05D008239 ORTHO05D009800 3.0e-46 191.4 930 25.7
Dinv23282 Davidia involucrata HOM05D008239 ORTHO05D009800 1.5e-34 152.5 716 25.3
Dinv25412 Davidia involucrata HOM05D008239 ORTHO05D009800 2.2e-33 148.7 427 30.4
Dinv12606 Davidia involucrata HOM05D008239 ORTHO05D009800 3.2e-32 144.8 348 33.3
Dinv41768 Davidia involucrata HOM05D018862 ORTHO05D009800 1.2e-28 132.9 323 35.9
Dinv42357 Davidia involucrata HOM05D008239 ORTHO05D009800 1.2e-28 132.9 498 27.1
Rhsim06G0231700 Rhododendron simsii HOM05D008239 ORTHO05D009800 1.4e-27 129.4 321 31.5
Dinv30487 Davidia involucrata HOM05D008239 ORTHO05D009800 9.9e-26 123.2 316 29.7
Dinv12600 Davidia involucrata HOM05D008239 ORTHO05D009800 9.3e-24 116.7 248 35.1
Hma1.2p1_0120F.1_g057080 Hydrangea macrophylla HOM05D008239 ORTHO05D009800 2.1e-23 115.5 287 33.1
Dinv23281 Davidia involucrata HOM05D008239 ORTHO05D009800 1.0e-22 113.2 338 27.8
Dinv41180 Davidia involucrata HOM05D008239 ORTHO05D009800 1.7e-22 112.5 284 32.0
COL.COLO4_04045 Corchorus olitorius HOM05D008239 ORTHO05D009800 6.6e-22 110.5 325 29.5
Dinv27633 Davidia involucrata HOM05D008239 ORTHO05D009800 5.6e-21 107.5 346 27.5
COL.COLO4_17209 Corchorus olitorius HOM05D008239 ORTHO05D009800 3.6e-20 104.8 326 30.4
Dinv41767 Davidia involucrata HOM05D018862 ORTHO05D009800 4.0e-19 101.3 365 29.0
Dinv38088 Davidia involucrata HOM05D008239 ORTHO05D009800 5.3e-19 100.9 357 26.9
Dinv04006 Davidia involucrata HOM05D008239 ORTHO05D009800 1.2e-18 99.8 331 28.1
Dinv25440 Davidia involucrata HOM05D008239 ORTHO05D009800 1.2e-18 99.8 308 29.2
Dinv38087 Davidia involucrata HOM05D008239 ORTHO05D009800 2.0e-18 99.0 317 27.8
Cc02_g10120 Coffea canephora HOM05D008239 ORTHO05D009800 2.6e-18 98.6 231 29.4
Cc03_g02640 Coffea canephora HOM05D008239 ORTHO05D009800 5.8e-18 97.4 326 29.4
COL.COLO4_19868 Corchorus olitorius HOM05D008239 ORTHO05D009800 9.9e-18 96.7 355 24.2
Dinv20749 Davidia involucrata HOM05D018862 ORTHO05D009800 1.7e-17 95.9 363 26.4
COL.COLO4_17217 Corchorus olitorius HOM05D008239 ORTHO05D009800 2.2e-17 95.5 327 28.4
Dinv27632 Davidia involucrata HOM05D008239 ORTHO05D009800 2.2e-17 95.5 327 27.5
Dinv04007 Davidia involucrata HOM05D008239 ORTHO05D009800 6.4e-17 94.0 479 26.3
Dinv42361 Davidia involucrata HOM05D008239 ORTHO05D009800 1.9e-16 92.4 187 36.4
Dinv30486 Davidia involucrata HOM05D010983 ORTHO05D009800 3.2e-16 91.7 227 29.1
AUR62013258 Chenopodium quinoa HOM05D023548 ORTHO05D009800 7.9e-15 87.0 303 27.1
AUR62020016 Chenopodium quinoa HOM05D023548 ORTHO05D009800 7.9e-15 87.0 303 27.1
Dinv30439 Davidia involucrata HOM05D008239 ORTHO05D009800 7.9e-15 87.0 206 30.1
Dinv25441 Davidia involucrata HOM05D008239 ORTHO05D009800 1.0e-14 86.7 213 30.5
Rhsim03G0008000 Rhododendron simsii HOM05D008239 ORTHO05D009800 2.5e-13 82.0 344 27.3
vmacro22053 Vaccinium macrocarpon HOM05D008239 ORTHO05D009800 3.3e-13 81.6 322 25.5
Os10g0102200 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 4.3e-13 81.3 245 28.2
Cc02_g10110 Coffea canephora HOM05D008239 ORTHO05D009800 7.4e-13 80.5 357 25.5
AUR62013259 Chenopodium quinoa HOM05D023548 ORTHO05D009800 9.6e-13 80.1 305 26.6
AUR62020015 Chenopodium quinoa HOM05D023548 ORTHO05D009800 9.6e-13 80.1 305 26.6
Cc00_g27060 Coffea canephora HOM05D008239 ORTHO05D009800 9.6e-13 80.1 159 32.7
Os01g0942900 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 9.6e-13 80.1 312 27.2
Os01g0943800 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 1.3e-12 79.7 264 28.4
Cc02_g10150 Coffea canephora HOM05D008239 ORTHO05D009800 4.8e-12 77.8 350 26.6
DCAR_023499 Daucus carota HOM05D008239 ORTHO05D009800 4.8e-12 77.8 216 28.7
EL10Ac3g05534 Beta vulgaris HOM05D025186 ORTHO05D009800 8.1e-12 77.0 202 28.7
Dinv42358 Davidia involucrata HOM05D008239 ORTHO05D009800 8.1e-12 77.0 408 23.3
Zm00001eb205000 Zea mays HOM05D013330 ORTHO05D009800 1.1e-11 76.6 271 26.9
TAR622G0243 Trochodendron aralioides HOM05D007472 ORTHO05D009477 2.4e-11 75.5 140 37.9
COL.COLO4_16500 Corchorus olitorius HOM05D008239 ORTHO05D009800 6.9e-11 73.9 526 23.4
Dinv07268 Davidia involucrata HOM05D008239 ORTHO05D009800 1.2e-10 73.2 243 29.6
Os12g0118800 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 1.2e-10 73.2 427 23.0
Os07g0515900 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 4.5e-10 71.2 270 26.7
Os05g0124000 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 1.3e-09 69.7 313 25.2
Os05g0124600 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 2.2e-09 68.9 207 31.4
Prupe.3G268600 Prunus persica HOM05D007472 ORTHO05D009477 3.8e-09 68.2 234 30.8
MD09G1050300 Malus domestica HOM05D007472 ORTHO05D009477 4.9e-09 67.8 190 32.1
Cfa007540 Carpinus fangiana HOM05D007472 ORTHO05D009477 1.1e-08 66.6 142 38.0
Potri.004G129100 Populus trichocarpa HOM05D007472 ORTHO05D009477 1.4e-08 66.2 187 29.4
MBI14_g12118_MAGBIO Magnolia biondii HOM05D007472 ORTHO05D009477 5.5e-08 64.3 141 33.3
Os12g0572800 Oryza sativa ssp. japonica HOM05D007472 ORTHO05D009477 5.5e-08 64.3 153 34.0
Manes.01G090001 Manihot esculenta HOM05D007472 ORTHO05D009477 1.2e-07 63.2 142 34.5
FAN02G3469 Fragaria x ananassa HOM05D007472 ORTHO05D009477 3.5e-07 61.6 140 32.9
COL.COLO4_12089 Corchorus olitorius HOM05D008239 ORTHO05D009800 4.6e-07 61.2 222 29.7
COL.COLO4_19875 Corchorus olitorius HOM05D008239 ORTHO05D009800 7.9e-07 60.5 239 28.5
PGR142G1798 Punica granatum HOM05D007472 ORTHO05D009477 1.0e-06 60.1 141 34.8
Rhsim13G0234400 Rhododendron simsii HOM05D008239 ORTHO05D009800 1.0e-06 60.1 187 30.5
Aa31LG2G4320 Aethionema arabicum HOM05D007472 ORTHO05D009477 2.3e-06 58.9 144 31.2
AUR62039817 Chenopodium quinoa HOM05D007472 ORTHO05D009477 2.3e-06 58.9 205 30.2
FAN05G4432 Fragaria x ananassa HOM05D007472 ORTHO05D009477 2.3e-06 58.9 140 32.9
Rhsim06G0198100 Rhododendron simsii HOM05D008239 ORTHO05D009800 2.3e-06 58.9 292 26.0
FvH4_6g48800 Fragaria vesca HOM05D007472 ORTHO05D009477 3.0e-06 58.5 228 27.6
Os11g0219400 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 3.9e-06 58.2 161 29.8
Aqoxy1G01920 Aquilegia oxysepala HOM05D007472 ORTHO05D009477 5.1e-06 57.8 145 32.4
CSS0022853 Camellia sinensis var. sinensis HOM05D008239 ORTHO05D009800 5.1e-06 57.8 110 36.4
Dinv41732 Davidia involucrata HOM05D018862 ORTHO05D184808 8.7e-06 57.0 139 32.4
FvH4_6g49850 Fragaria vesca HOM05D007472 ORTHO05D009477 8.7e-06 57.0 192 26.6


User provided reference genes

Program Settings