Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41742 Davidia involucrata HOM05D007955 ORTHO05D010034 7.4e-67 256.9 117 100.0
Potri.013G108100 Populus trichocarpa HOM05D007955 ORTHO05D010034 1.4e-41 172.9 119 66.4
Hma1.2p1_0004F.1_g003980 Hydrangea macrophylla HOM05D007955 ORTHO05D010034 9.1e-41 170.2 135 60.7
QL02p025993 Quercus lobata HOM05D007955 ORTHO05D010034 3.5e-40 168.3 125 68.0
Nitab4.5_0002013g0010 Nicotiana tabacum HOM05D007955 ORTHO05D010034 2.9e-39 165.2 122 64.8
Duzib177G0365 Durio zibethinus HOM05D007955 ORTHO05D010034 5.0e-39 164.5 108 72.2
Rhsim06G0114600 Rhododendron simsii HOM05D007955 ORTHO05D010034 1.9e-38 162.5 129 64.3
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 2.8e-37 158.7 109 67.9
Lsat_1_v5_gn_1_12280 Lactuca sativa HOM05D007955 ORTHO05D010034 2.8e-37 158.7 85 81.2
Gohir.A05G273100 Gossypium hirsutum HOM05D007955 ORTHO05D010034 4.7e-37 157.9 107 70.1
Gohir.D05G275500 Gossypium hirsutum HOM05D007955 ORTHO05D010034 8.0e-37 157.1 107 70.1
Gorai.009G288600 Gossypium raimondii HOM05D007955 ORTHO05D010034 8.0e-37 157.1 107 70.1
MD15G1408300 Malus domestica HOM05D007955 ORTHO05D010034 8.0e-37 157.1 120 64.2
HanXRQChr02g0044251 Helianthus annuus HOM05D007955 ORTHO05D010034 1.4e-36 156.4 84 79.8
Sopen11g011230 Solanum pennellii HOM05D007955 ORTHO05D010034 1.4e-36 156.4 117 64.1
Sc23g0001440 Simmondsia chinensis HOM05D007955 ORTHO05D010034 2.3e-36 155.6 117 64.1
arahy.Tifrunner.gnm1.ann1.T5U9L2 Arachis hypogaea HOM05D007955 ORTHO05D010034 4.0e-36 154.8 79 84.8
CSS0011086 Camellia sinensis var. sinensis HOM05D007955 ORTHO05D010034 4.0e-36 154.8 82 81.7
PGR042G1239 Punica granatum HOM05D007955 ORTHO05D010034 4.0e-36 154.8 122 63.9
TWI14G1427 Tripterygium wilfordii HOM05D007955 ORTHO05D010034 4.0e-36 154.8 119 63.9
arahy.Tifrunner.gnm1.ann1.6E9FUG Arachis hypogaea HOM05D007955 ORTHO05D010034 6.8e-36 154.1 79 84.8
Nitab4.5_0003211g0020 Nicotiana tabacum HOM05D007955 ORTHO05D010034 6.8e-36 154.1 122 60.7
Solyc11g021365.2 Solanum lycopersicum HOM05D007955 ORTHO05D010034 1.2e-35 153.3 117 64.1
Thecc.08G188200 Theobroma cacao HOM05D007955 ORTHO05D010034 1.2e-35 153.3 109 67.0
Hund16783 Selenicereus undatus HOM05D007955 ORTHO05D010034 3.4e-35 151.8 82 80.5
CANSAT25G1976 Cannabis sativa HOM05D007955 ORTHO05D010034 5.7e-35 151.0 104 67.3
Thhalv10009125m.g Eutrema salsugineum HOM05D007955 ORTHO05D010034 5.7e-35 151.0 123 58.5
Eucgr.F03002 Eucalyptus grandis HOM05D007955 ORTHO05D010034 1.3e-34 149.8 117 61.5
Sp1g20140 Schrenkiella parvula HOM05D007955 ORTHO05D010034 1.7e-34 149.4 122 60.7
EL10Ac1g00118 Beta vulgaris HOM05D007955 ORTHO05D010034 3.7e-34 148.3 86 79.1
CARHR023000 Cardamine hirsuta HOM05D007955 ORTHO05D010034 4.9e-34 147.9 84 73.8
Manes.18G103900 Manihot esculenta HOM05D007955 ORTHO05D010034 1.4e-33 146.4 99 66.7
BcaC07g39172 Brassica carinata HOM05D007955 ORTHO05D010034 1.8e-33 146.0 75 82.7
AT1G22630 Arabidopsis thaliana HOM05D007955 ORTHO05D010034 3.1e-33 145.2 84 73.8
RcHm_v2.0_Chr7g0228151 Rosa chinensis HOM05D007955 ORTHO05D010034 5.4e-33 144.4 107 64.5
AL1G36160 Arabidopsis lyrata HOM05D007955 ORTHO05D010034 1.2e-32 143.3 84 72.6
FvH4_5g32101 Fragaria vesca HOM05D007955 ORTHO05D010034 1.2e-32 143.3 79 79.7
BolC8t49802H Brassica oleracea HOM05D007955 ORTHO05D010034 1.6e-32 142.9 74 81.1
THA.LOC104809734 Tarenaya hassleriana HOM05D007955 ORTHO05D010034 1.6e-32 142.9 94 63.8
Carub.0001s2214 Capsella rubella HOM05D007955 ORTHO05D010034 2.7e-32 142.1 84 71.4
Aa31LG7G6520 Aethionema arabicum HOM05D007955 ORTHO05D010034 3.5e-32 141.7 85 71.8
CiPaw.07G236600 Carya illinoinensis HOM05D007955 ORTHO05D010034 3.5e-32 141.7 120 60.8
DCAR_001459 Daucus carota HOM05D007955 ORTHO05D010034 4.5e-32 141.4 126 57.9
MBI03_g18672_MAGBIO Magnolia biondii HOM05D007955 ORTHO05D010034 4.5e-32 141.4 129 58.9
Haze_21296 Corylus avellana HOM05D007955 ORTHO05D010034 5.9e-32 141.0 122 59.8
MELO3C021951.2 Cucumis melo HOM05D007955 ORTHO05D010034 7.8e-32 140.6 67 88.1
CsaV3_2G014460 Cucumis sativus L. HOM05D007955 ORTHO05D010034 7.8e-32 140.6 67 88.1
CDE05G3389 Ceratophyllum demersum HOM05D007955 ORTHO05D010034 2.3e-31 139.0 84 73.8
Cfa012936 Carpinus fangiana HOM05D007955 ORTHO05D010034 2.9e-31 138.7 122 59.8
ClCG00G002970 Citrullus lanatus HOM05D007955 ORTHO05D010034 8.6e-31 137.1 63 90.5
ClCG09G017850 Citrullus lanatus HOM05D007955 ORTHO05D010034 8.6e-31 137.1 63 90.5
VMungo1127G1330 Vigna mungo HOM05D007955 ORTHO05D010034 2.1e-29 132.5 77 75.3
Glyma.08G239000 Glycine max HOM05D007955 ORTHO05D010034 1.0e-28 130.2 78 76.9
Aqoxy6G00096 Aquilegia oxysepala HOM05D007955 ORTHO05D010034 2.3e-28 129.0 110 53.6
Peaxi162Scf00391g00733 Petunia axillaris HOM05D007955 ORTHO05D010034 2.3e-28 129.0 120 55.0
PGSC0003DMG400009285 Solanum tuberosum HOM05D007955 ORTHO05D010034 2.3e-28 129.0 117 55.6
Migut.C01298 Erythranthe guttata HOM05D007955 ORTHO05D010034 1.2e-27 126.7 117 57.3
Prupe.1G552800 Prunus persica HOM05D007955 ORTHO05D010034 1.5e-27 126.3 120 55.8
C08p21650 Brassica napus HOM05D000726 ORTHO05D010034 2.0e-27 125.9 67 77.6
A08p28450 Brassica napus HOM05D000726 ORTHO05D010034 3.7e-26 121.7 67 76.1
SGA_v2.0_scaffold24G10574 Striga asiatica HOM05D007955 ORTHO05D010034 6.4e-26 120.9 111 56.8
Nn3g20179 Nelumbo nucifera HOM05D007955 ORTHO05D010034 1.4e-25 119.8 120 55.8
BraA08t34774Z Brassica rapa HOM05D000726 ORTHO05D010034 9.2e-25 117.1 85 62.4
HPP92_004623 Vanilla planifolia HOM05D007955 ORTHO05D010034 1.2e-24 116.7 107 55.1
TPR.G34150 Trifolium pratense HOM05D007955 ORTHO05D010034 2.3e-23 112.5 112 53.6
Medtr4g032905 Medicago truncatula HOM05D007955 ORTHO05D010034 1.9e-22 109.4 87 60.9
Pp3c19_10130 Physcomitrium patens HOM05D007955 ORTHO05D010034 4.3e-22 108.2 52 84.6
Cc00_g22060 Coffea canephora HOM05D007955 ORTHO05D010034 2.1e-21 105.9 91 59.3
SEGI_23617 Sequoiadendron giganteum HOM05D007955 ORTHO05D010034 8.9e-20 100.5 65 69.2
PSO170G1023 Papaver somniferum HOM05D007955 ORTHO05D010034 1.5e-19 99.8 117 49.6
unitig_578.g16590 Utricularia gibba HOM05D007955 ORTHO05D010034 2.0e-19 99.4 75 64.0
SMO119G0376 Selaginella moellendorffii HOM05D007955 ORTHO05D010034 2.6e-19 99.0 61 68.9
Os05g0105800 Oryza sativa ssp. japonica HOM05D007955 ORTHO05D010034 7.5e-19 97.4 45 91.1
PSO782G1662 Papaver somniferum HOM05D007955 ORTHO05D010034 9.8e-19 97.1 119 50.4
vmacro12469 Vaccinium macrocarpon HOM05D007955 ORTHO05D010034 2.9e-18 95.5 46 91.3
Zm00001eb356110 Zea mays HOM05D007955 ORTHO05D010034 2.1e-16 89.4 66 62.1
AagrBONN_evm.TU.Sc2ySwM_228.898 Anthoceros agrestis HOM05D007955 ORTHO05D010034 3.5e-16 88.6 65 63.1
FAN13G0857 Fragaria x ananassa HOM05D000666 ORTHO05D001431 2.3e-15 85.9 81 55.6
Mapoly0510s0001 Marchantia polymorpha HOM05D007955 ORTHO05D010034 5.1e-15 84.7 63 61.9
FAN08G1854 Fragaria x ananassa HOM05D000666 ORTHO05D001431 6.6e-15 84.3 50 76.0
Sed0016691 Sechium edule HOM05D007955 ORTHO05D010034 4.3e-14 81.6 71 57.7
CBR_g36554 Chara braunii HOM05D007955 ORTHO05D010034 7.1e-09 64.3 30 86.7
TAR381G1638 Trochodendron aralioides HOM05D007955 ORTHO05D415121 9.5e-06 53.9 74 37.8


User provided reference genes

Program Settings