Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41735 Davidia involucrata HOM05D003880 ORTHO05D004959 0.0e+00 1162.5 583 100.0
Dinv02585 Davidia involucrata HOM05D003880 ORTHO05D004959 9.8e-269 929.9 576 83.7
TAR628G0517 Trochodendron aralioides HOM05D003880 ORTHO05D004959 1.2e-234 816.6 553 75.8
Actinidia23014 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.3e-233 813.1 589 75.6
Actinidia05639 Actinidia chinensis HOM05D003880 ORTHO05D004959 7.3e-232 807.4 557 77.4
Actinidia02567 Actinidia chinensis HOM05D003880 ORTHO05D004959 8.4e-228 793.9 589 73.3
Nn5g27605 Nelumbo nucifera HOM05D003880 ORTHO05D004959 3.2e-227 792.0 570 71.8
Prupe.1G551200 Prunus persica HOM05D003880 ORTHO05D004959 1.1e-224 783.5 560 74.1
ClCG08G000380 Citrullus lanatus HOM05D003880 ORTHO05D004959 1.3e-220 770.0 584 70.9
Lj4A481T13 Lonicera japonica HOM05D003880 ORTHO05D004959 2.7e-218 762.3 555 73.0
vmacro12476 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 9.6e-216 753.8 531 72.7
CiPaw.03G019400 Carya illinoinensis HOM05D003880 ORTHO05D004959 3.7e-215 751.9 541 72.6
Cfa008134 Carpinus fangiana HOM05D003880 ORTHO05D004959 3.1e-214 748.8 523 75.3
MELO3C022212.2 Cucumis melo HOM05D003880 ORTHO05D004959 7.6e-213 744.2 573 69.5
FAN08G3431 Fragaria x ananassa HOM05D003880 ORTHO05D004959 7.6e-213 744.2 591 66.5
Hma1.2p1_0004F.1_g004030 Hydrangea macrophylla HOM05D003880 ORTHO05D004959 7.6e-213 744.2 608 67.8
CsaV3_5G040400 Cucumis sativus L. HOM05D003880 ORTHO05D004959 1.0e-212 743.8 572 69.8
TWI59G0907 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 1.7e-212 743.0 576 69.6
FAN04G0842 Fragaria x ananassa HOM05D003880 ORTHO05D004959 6.5e-212 741.1 589 66.0
TWI14G0176 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 8.4e-212 740.7 581 69.2
FvH4_5g32350 Fragaria vesca HOM05D003880 ORTHO05D004959 1.1e-211 740.3 590 66.4
FAN13G2674 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.1e-211 740.3 590 66.4
GSVIVG01012776001 Vitis vinifera HOM05D003880 ORTHO05D004959 1.9e-211 739.6 519 75.7
FAN18G3221 Fragaria x ananassa HOM05D003880 ORTHO05D004959 2.5e-211 739.2 610 65.7
PGR042G0805 Punica granatum HOM05D003880 ORTHO05D004959 3.5e-210 735.3 578 69.7
Lj7A289G27 Lonicera japonica HOM05D003880 ORTHO05D004959 4.6e-210 734.9 521 74.9
MD10G1100400 Malus domestica HOM05D003880 ORTHO05D004959 7.9e-210 734.2 561 69.5
Lsat_1_v5_gn_1_10140 Lactuca sativa HOM05D003880 ORTHO05D004959 1.8e-209 733.0 531 72.1
Thecc.08G186500 Theobroma cacao HOM05D003880 ORTHO05D004959 6.7e-209 731.1 556 71.0
Rhsim06G0088000 Rhododendron simsii HOM05D003880 ORTHO05D004959 4.8e-207 724.9 581 67.5
QL09p004950 Quercus lobata HOM05D003880 ORTHO05D004959 1.1e-206 723.8 534 71.0
Gorai.006G130000 Gossypium raimondii HOM05D003880 ORTHO05D004959 1.4e-206 723.4 560 70.4
MD05G1093300 Malus domestica HOM05D003880 ORTHO05D004959 1.4e-206 723.4 562 68.7
PSO063G4997 Papaver somniferum HOM05D003880 ORTHO05D004959 2.4e-206 722.6 558 68.1
Cpa.g.sc66.21 Carica papaya HOM05D003880 ORTHO05D004959 3.1e-206 722.2 547 72.4
Nitab4.5_0000167g0290 Nicotiana tabacum HOM05D003880 ORTHO05D004959 3.1e-206 722.2 594 66.7
Solyc11g020780.2 Solanum lycopersicum HOM05D003880 ORTHO05D004959 5.3e-206 721.5 561 69.3
Sopen11g010860 Solanum pennellii HOM05D003880 ORTHO05D004959 9.0e-206 720.7 561 69.5
Lsat_1_v5_gn_4_136101 Lactuca sativa HOM05D003880 ORTHO05D004959 1.2e-205 720.3 530 70.6
Aqoxy4G01178 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 2.6e-205 719.2 561 67.4
Eucgr.F02584 Eucalyptus grandis HOM05D003880 ORTHO05D004959 4.5e-205 718.4 564 68.6
PSO017G2071 Papaver somniferum HOM05D003880 ORTHO05D004959 1.0e-204 717.2 557 67.9
Duzib177G0936 Durio zibethinus HOM05D003880 ORTHO05D004959 1.3e-204 716.8 496 75.2
Gohir.D09G112200 Gossypium hirsutum HOM05D003880 ORTHO05D004959 1.3e-204 716.8 561 69.7
PGSC0003DMG400009278 Solanum tuberosum HOM05D003880 ORTHO05D004959 1.1e-203 713.8 566 68.9
Peaxi162Scf00391g00533 Petunia axillaris HOM05D003880 ORTHO05D004959 3.2e-203 712.2 534 70.8
RcHm_v2.0_Chr7g0228851 Rosa chinensis HOM05D003880 ORTHO05D004959 1.0e-201 707.2 602 65.0
HanXRQChr09g0260531 Helianthus annuus HOM05D003880 ORTHO05D004959 2.3e-201 706.1 591 65.0
MBI17_g21473_MAGBIO Magnolia biondii HOM05D003880 ORTHO05D004959 6.7e-201 704.5 560 68.2
Atru.chr13.2392 Acer truncatum HOM05D003880 ORTHO05D004959 8.8e-201 704.1 554 69.0
Potri.019G081600 Populus trichocarpa HOM05D003880 ORTHO05D004959 1.5e-200 703.4 551 67.5
CAN.G259.4 Capsicum annuum HOM05D003880 ORTHO05D004959 1.7e-199 699.9 551 67.7
vmacro00757 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 1.7e-199 699.9 573 66.7
CiPaw.04G012900 Carya illinoinensis HOM05D003880 ORTHO05D004959 2.2e-199 699.5 383 89.3
Sc23g0001360 Simmondsia chinensis HOM05D003880 ORTHO05D004959 1.2e-197 693.7 566 66.4
MSTRG.1545 Avicennia marina HOM05D003880 ORTHO05D004959 4.5e-197 691.8 584 65.2
Sabra19G0093200 Salix brachista HOM05D003880 ORTHO05D004959 5.9e-197 691.4 553 66.9
COL.COLO4_12797 Corchorus olitorius HOM05D003880 ORTHO05D004959 7.7e-197 691.0 510 71.2
Duzib116G0170 Durio zibethinus HOM05D003880 ORTHO05D004959 7.7e-197 691.0 566 67.5
Migut.N03362 Erythranthe guttata HOM05D003880 ORTHO05D004959 7.7e-197 691.0 563 66.8
Ciclev10000797m.g Citrus clementina HOM05D003880 ORTHO05D004959 1.0e-196 690.6 550 66.7
Manes.02G194600 Manihot esculenta HOM05D003880 ORTHO05D004959 1.0e-196 690.6 569 66.3
Phvul.005G000500 Phaseolus vulgaris HOM05D003880 ORTHO05D004959 5.0e-196 688.3 531 69.9
Migut.C01288 Erythranthe guttata HOM05D003880 ORTHO05D004959 1.4e-195 686.8 589 64.3
Hund16787 Selenicereus undatus HOM05D003880 ORTHO05D004959 1.9e-195 686.4 615 62.3
VMungo1080G1836 Vigna mungo HOM05D003880 ORTHO05D004959 3.2e-195 685.6 400 84.5
Migut.O00683 Erythranthe guttata HOM05D003880 ORTHO05D004959 3.6e-194 682.2 563 66.1
CANSAT11G2580 Cannabis sativa HOM05D003880 ORTHO05D004959 4.7e-194 681.8 571 66.2
arahy.Tifrunner.gnm1.ann1.HC95SM Arachis hypogaea HOM05D003880 ORTHO05D004959 1.8e-193 679.9 424 80.9
DCAR_001082 Daucus carota HOM05D003880 ORTHO05D004959 1.8e-193 679.9 557 65.9
arahy.Tifrunner.gnm1.ann1.9B0XDD Arachis hypogaea HOM05D003880 ORTHO05D004959 1.1e-192 677.2 424 80.4
Potri.013G109400 Populus trichocarpa HOM05D003880 ORTHO05D004959 2.0e-192 676.4 554 67.0
Aa31LG7G6540 Aethionema arabicum HOM05D003880 ORTHO05D004959 1.3e-191 673.7 519 70.1
SGA_v2.0_scaffold24G10581 Striga asiatica HOM05D003880 ORTHO05D004959 1.7e-191 673.3 465 74.0
SalBow7G4466 Salvia bowleyana HOM05D003880 ORTHO05D004959 2.8e-191 672.5 553 66.4
SalBow6G5395 Salvia bowleyana HOM05D003880 ORTHO05D004959 1.1e-190 670.6 575 65.0
Sed0018926 Sechium edule HOM05D003880 ORTHO05D004959 1.1e-190 670.6 542 67.9
SalBow6G4536 Salvia bowleyana HOM05D003880 ORTHO05D004959 1.4e-190 670.2 576 64.9
Cc00_g06530 Coffea canephora HOM05D003880 ORTHO05D004959 2.4e-190 669.5 531 68.4
SGA_v2.0_scaffold118G32535 Striga asiatica HOM05D003880 ORTHO05D004959 2.4e-190 669.5 568 65.5
Sabra13G0094300 Salix brachista HOM05D003880 ORTHO05D004959 3.1e-190 669.1 552 66.1
Lj3g0009516 Lotus japonicus HOM05D003880 ORTHO05D004959 5.3e-190 668.3 527 67.0
HanXRQChr11g0326071 Helianthus annuus HOM05D003880 ORTHO05D004959 9.1e-190 667.5 577 63.6
Manes.18G103500 Manihot esculenta HOM05D003880 ORTHO05D004959 1.2e-189 667.2 561 65.1
Glyma.04G256800 Glycine max HOM05D003880 ORTHO05D004959 3.5e-189 665.6 404 82.2
Glyma.06G324700 Glycine max HOM05D003880 ORTHO05D004959 4.5e-189 665.2 555 65.9
THA.LOC104800120 Tarenaya hassleriana HOM05D003880 ORTHO05D004959 1.7e-188 663.3 565 66.0
Gohir.A09G115400 Gossypium hirsutum HOM05D003880 ORTHO05D004959 3.8e-188 662.1 556 66.5
C06p46140 Brassica napus HOM05D003880 ORTHO05D004959 5.0e-188 661.8 520 68.1
Medtr3g005360 Medicago truncatula HOM05D003880 ORTHO05D004959 6.5e-188 661.4 378 85.7
Psat1g000520 Pisum sativum HOM05D003880 ORTHO05D004959 6.5e-188 661.4 395 81.8
BcaB03g14926 Brassica carinata HOM05D003880 ORTHO05D004959 8.5e-188 661.0 518 68.5
Thhalv10018309m.g Eutrema salsugineum HOM05D003880 ORTHO05D004959 8.5e-188 661.0 541 66.5
Carub.0002s1882 Capsella rubella HOM05D003880 ORTHO05D004959 1.1e-187 660.6 575 64.3
Lalb_Chr09g0332911 Lupinus albus HOM05D003880 ORTHO05D004959 1.1e-187 660.6 417 78.9
Oeu025391.1 Olea europaea HOM05D003880 ORTHO05D004959 1.9e-187 659.8 453 74.2
BolC6t39667H Brassica oleracea HOM05D003880 ORTHO05D004959 1.2e-186 657.1 518 67.8
Lalb_Chr05g0224761 Lupinus albus HOM05D003880 ORTHO05D004959 1.2e-186 657.1 379 85.2
CARHR064840 Cardamine hirsuta HOM05D003880 ORTHO05D004959 2.1e-186 656.4 578 63.5
BcaC08g46654 Brassica carinata HOM05D003880 ORTHO05D004959 3.6e-186 655.6 518 67.8
Carub.0001s2216 Capsella rubella HOM05D003880 ORTHO05D004959 4.7e-186 655.2 507 69.2
Ca_13965_v3 Cicer arietinum L. HOM05D003880 ORTHO05D004959 4.7e-186 655.2 379 85.2
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 4.7e-186 655.2 493 69.4
Aqoxy7G03411 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 8.0e-186 654.4 384 82.3
BraA07t31387Z Brassica rapa HOM05D003880 ORTHO05D004959 8.0e-186 654.4 518 67.8
A07p38210 Brassica napus HOM05D003880 ORTHO05D004959 1.4e-185 653.7 518 67.6
Sp5g27110 Schrenkiella parvula HOM05D003880 ORTHO05D004959 3.0e-185 652.5 528 67.4
AUR62004625 Chenopodium quinoa HOM05D003880 ORTHO05D004959 5.2e-185 651.7 581 61.3
ATR0661G349 Amborella trichopoda HOM05D003880 ORTHO05D004959 1.1e-184 650.6 566 63.4
AL2G31670 Arabidopsis lyrata HOM05D003880 ORTHO05D004959 1.1e-184 650.6 575 64.0
TPR.G25498 Trifolium pratense HOM05D003880 ORTHO05D004959 2.0e-184 649.8 376 84.0
AUR62023520 Chenopodium quinoa HOM05D003880 ORTHO05D004959 5.7e-184 648.3 516 66.7
Oeu004740.1 Olea europaea HOM05D003880 ORTHO05D004959 4.8e-183 645.2 475 71.4
unitig_747.g21476 Utricularia gibba HOM05D003880 ORTHO05D004959 8.2e-183 644.4 562 63.5
Aa31LG4G10790 Aethionema arabicum HOM05D003880 ORTHO05D004959 1.4e-182 643.7 481 71.3
A02p17640 Brassica napus HOM05D003880 ORTHO05D004959 9.1e-182 641.0 540 64.6
unitig_0.g2129 Utricularia gibba HOM05D003880 ORTHO05D004959 9.1e-182 641.0 554 65.0
BraA02t06810Z Brassica rapa HOM05D003880 ORTHO05D004959 1.6e-181 640.2 540 64.6
CDE04G1100 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 1.7e-180 636.7 533 64.2
BcaC03g15327 Brassica carinata HOM05D003880 ORTHO05D004959 2.2e-180 636.3 529 66.0
C02p29320 Brassica napus HOM05D003880 ORTHO05D004959 2.2e-180 636.3 529 66.0
BolC2t08983H Brassica oleracea HOM05D003880 ORTHO05D004959 2.2e-180 636.3 529 66.0
CDE04G1048 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 5.0e-180 635.2 535 64.7
SGA_v2.0_scaffold149G36569 Striga asiatica HOM05D003880 ORTHO05D004959 5.0e-180 635.2 557 62.5
BcaB05g24701 Brassica carinata HOM05D003880 ORTHO05D004959 6.5e-180 634.8 399 78.9
AT1G72040 Arabidopsis thaliana HOM05D003880 ORTHO05D004959 5.5e-179 631.7 575 62.6
Os05g0430200 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 4.7e-178 628.6 361 84.8
Zm00001eb348750 Zea mays HOM05D003880 ORTHO05D004959 1.8e-177 626.7 428 73.8
Os01g0874100 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 8.8e-177 624.4 433 74.8
EL10Ac1g00108 Beta vulgaris HOM05D003880 ORTHO05D004959 1.4e-174 617.1 576 59.2
Zm00001eb146250 Zea mays HOM05D003880 ORTHO05D004959 3.1e-174 615.9 394 76.9
Ah.05g178350 Amaranthus hybridus HOM05D003880 ORTHO05D004959 7.0e-174 614.8 562 59.4
DCAR_011525 Daucus carota HOM05D003880 ORTHO05D004959 2.7e-173 612.8 549 61.6
Actinidia03514 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.5e-168 597.0 331 88.8
CDE04G1975 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 2.4e-166 589.7 408 72.8
Nitab4.5_0003010g0030 Nicotiana tabacum HOM05D003880 ORTHO05D004959 7.8e-157 558.1 592 56.6
SHI35657 Sapria himalayana HOM05D003880 ORTHO05D004959 1.5e-147 527.3 412 65.8
Pp3c12_15090 Physcomitrium patens HOM05D003880 ORTHO05D004959 6.8e-145 518.5 410 64.4
SEGI_26933 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 2.2e-143 513.5 315 76.5
Mapoly0028s0143 Marchantia polymorpha HOM05D003880 ORTHO05D004959 1.4e-137 494.2 449 58.8
SMO228G0044 Selaginella moellendorffii HOM05D003880 ORTHO05D004959 9.2e-134 481.5 350 67.4
TAR624G0155 Trochodendron aralioides HOM05D003880 ORTHO05D004959 3.0e-132 476.5 378 66.9
SEGI_09673 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 8.1e-130 468.4 274 78.8
FAN04G1012 Fragaria x ananassa HOM05D003880 ORTHO05D004959 7.6e-112 408.7 375 60.8
BraA02t08014Z Brassica rapa HOM05D003880 ORTHO05D004959 5.5e-102 375.9 209 83.7
A02p29920 Brassica napus HOM05D003880 ORTHO05D004959 5.9e-96 355.9 197 83.8
PRCOL_00007080 Prasinoderma coloniale HOM05D003880 ORTHO05D004959 2.5e-94 350.5 399 49.4
BcaNung01810 Brassica carinata HOM05D003880 ORTHO05D004959 1.6e-85 321.2 180 82.2
CSS0041582 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 2.6e-80 303.9 159 87.4
CSS0012164 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 5.9e-80 302.8 156 89.1
CSS0024003 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 5.9e-80 302.8 156 89.1
AagrBONN_evm.TU.Sc2ySwM_344.3442 Anthoceros agrestis HOM05D003880 ORTHO05D004959 2.6e-75 287.3 280 58.2
HPP92_019380 Vanilla planifolia HOM05D003880 ORTHO05D004959 1.3e-66 258.5 473 37.4
MCO01G353 Micromonas commoda HOM05D003880 ORTHO05D004959 2.7e-64 250.8 403 38.0
HPP92_027627 Vanilla planifolia HOM05D003880 ORTHO05D004959 6.8e-60 236.1 182 69.2
Cre02.g095350 Chlamydomonas reinhardtii HOM05D003880 ORTHO05D004959 9.5e-54 215.7 302 38.7
HPP92_019377 Vanilla planifolia HOM05D003880 ORTHO05D004959 2.3e-52 211.1 127 82.7
Pp3c15_5240 Physcomitrium patens HOM05D003880 ORTHO05D004959 6.6e-47 193.0 275 37.1
BolC5t31452H Brassica oleracea HOM05D003880 ORTHO05D004959 4.0e-44 183.7 109 79.8
BolC8t50393H Brassica oleracea HOM05D003880 ORTHO05D004959 2.3e-36 157.9 134 61.2
Actinidia18360 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.5e-35 155.2 88 80.7
Pp3c4_20480 Physcomitrium patens HOM05D003880 ORTHO05D004959 2.0e-35 154.8 110 67.3
C08p27770 Brassica napus HOM05D003880 ORTHO05D004959 5.4e-33 146.7 83 80.7
BcaB08g34411 Brassica carinata HOM05D003880 ORTHO05D004959 7.8e-32 142.9 112 64.3
BcaC07g39615 Brassica carinata HOM05D003880 ORTHO05D004959 2.3e-31 141.4 83 74.7
Mapoly0080s0005 Marchantia polymorpha HOM05D003880 ORTHO05D004959 3.9e-31 140.6 215 36.3
Dinv20970 Davidia involucrata HOM05D064623 ORTHO05D179594 1.1e-30 139.0 101 73.3
Dinv21035 Davidia involucrata HOM05D064623 ORTHO05D181186 1.1e-30 139.0 101 73.3
BcaB05g25101 Brassica carinata HOM05D003880 ORTHO05D019999 5.4e-25 120.2 97 61.9
Oeu004742.1 Olea europaea HOM05D003880 ORTHO05D004959 5.4e-25 120.2 230 40.9
TAR624G1033 Trochodendron aralioides HOM05D003880 ORTHO05D415972 4.6e-24 117.1 151 49.0
HPP92_027628 Vanilla planifolia HOM05D003880 ORTHO05D019999 1.9e-22 111.7 121 52.1
Oeu021226.1 Olea europaea HOM05D003880 ORTHO05D019999 6.8e-20 103.2 64 75.0
PRCOL_00005076 Prasinoderma coloniale HOM05D003880 ORTHO05D333288 2.5e-14 84.7 175 34.9
BcaB07g33153 Brassica carinata HOM05D003880 ORTHO05D019999 3.6e-13 80.9 45 84.4
Rhsim01G0139900 Rhododendron simsii HOM05D002321 ORTHO05D006445 1.1e-12 79.3 64 67.2
Lsat_1_v5_gn_1_10160 Lactuca sativa HOM05D003880 ORTHO05D019999 5.2e-12 77.0 41 87.8
CAN.G308.60 Capsicum annuum HOM05D003880 ORTHO05D000314 9.0e-12 76.3 111 42.3
BcaB02g09679 Brassica carinata HOM05D003880 ORTHO05D019999 4.9e-10 70.5 114 41.2
Dinv10332 Davidia involucrata HOM05D000588 ORTHO05D000637 1.2e-08 65.9 50 76.0
COL.COLO4_03399 Corchorus olitorius HOM05D003880 ORTHO05D019999 1.1e-06 59.3 32 78.1


User provided reference genes

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