Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41730 Davidia involucrata HOM05D000021 ORTHO05D015223 3.3e-96 355.9 333 100.0
Dinv41722 Davidia involucrata HOM05D000021 ORTHO05D000010 1.5e-19 101.3 201 58.7
CSS0007625 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 4.0e-17 93.2 141 45.4
Dinv41729 Davidia involucrata HOM05D000021 ORTHO05D000010 7.6e-16 89.0 142 52.1
Dinv36244 Davidia involucrata HOM05D000021 ORTHO05D000010 1.0e-15 88.6 192 52.1
CSS0012859 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 6.5e-15 85.9 140 47.1
Dinv41723 Davidia involucrata HOM05D000021 ORTHO05D000010 4.2e-14 83.2 141 46.1
TAR473G0002 Trochodendron aralioides HOM05D000021 ORTHO05D000010 4.2e-14 83.2 196 38.8
CSS0024035 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 2.7e-13 80.5 139 48.9
MBI15_g27816_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 4.6e-13 79.7 173 47.4
CSS0027587 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 7.9e-13 79.0 135 56.3
CSS0048381 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 1.3e-12 78.2 150 51.3
Migut.G01066 Erythranthe guttata HOM05D000021 ORTHO05D000010 1.3e-12 78.2 201 44.8
Thecc.05G018800 Theobroma cacao HOM05D000021 ORTHO05D000010 1.8e-12 77.8 162 34.0
Manes.02G194500 Manihot esculenta HOM05D000021 ORTHO05D000010 3.0e-12 77.0 189 37.6
Eucgr.C01554 Eucalyptus grandis HOM05D000021 ORTHO05D000010 5.1e-12 76.3 112 41.1
Eucgr.B02264 Eucalyptus grandis HOM05D000021 ORTHO05D000010 8.7e-12 75.5 165 39.4
Rhsim11G0057200 Rhododendron simsii HOM05D000021 ORTHO05D000010 8.7e-12 75.5 180 47.2
TAR636G0215 Trochodendron aralioides HOM05D000021 ORTHO05D000010 8.7e-12 75.5 192 52.1
CSS0002252 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 1.1e-11 75.1 87 49.4
PSO063G2028 Papaver somniferum HOM05D000021 ORTHO05D000010 1.5e-11 74.7 165 49.1
TAR636G3398 Trochodendron aralioides HOM05D000021 ORTHO05D000010 2.5e-11 73.9 143 53.1
CSS0042411 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 3.3e-11 73.6 86 48.8
Duzib168G0715 Durio zibethinus HOM05D000021 ORTHO05D000010 4.3e-11 73.2 190 35.3
vmacro00240 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 4.3e-11 73.2 82 65.9
Cpa.g.sc7.107 Carica papaya HOM05D000021 ORTHO05D000010 5.7e-11 72.8 167 47.3
Ciclev10018315m.g Citrus clementina HOM05D000021 ORTHO05D000010 5.7e-11 72.8 195 41.0
Rhsim11G0056700 Rhododendron simsii HOM05D000021 ORTHO05D000010 7.4e-11 72.4 83 62.7
Rhsim11G0057500 Rhododendron simsii HOM05D000021 ORTHO05D000010 7.4e-11 72.4 80 66.2
CSS0038113 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 9.6e-11 72.0 84 46.4
MBI04_g13685_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 9.6e-11 72.0 137 43.1
Prupe.6G248200 Prunus persica HOM05D000021 ORTHO05D000010 1.3e-10 71.6 178 33.1
SalBow7G1704 Salvia bowleyana HOM05D000021 ORTHO05D000010 1.3e-10 71.6 172 43.0
Gorai.002G049400 Gossypium raimondii HOM05D000021 ORTHO05D000010 1.6e-10 71.2 168 31.0
Cc11_g02170 Coffea canephora HOM05D000021 ORTHO05D000010 2.8e-10 70.5 168 42.3
MD04G1150300 Malus domestica HOM05D000021 ORTHO05D000010 2.8e-10 70.5 192 42.2
TAR594G0001 Trochodendron aralioides HOM05D000021 ORTHO05D000010 2.8e-10 70.5 149 47.0
vmacro12477 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 2.8e-10 70.5 54 64.8
Gohir.A01G049266 Gossypium hirsutum HOM05D000021 ORTHO05D000010 3.7e-10 70.1 168 31.0
Eucgr.D01568 Eucalyptus grandis HOM05D000021 ORTHO05D000010 4.8e-10 69.7 141 34.0
FAN14G2884 Fragaria x ananassa HOM05D000021 ORTHO05D000010 6.2e-10 69.3 224 27.7
Rhsim11G0057300 Rhododendron simsii HOM05D000021 ORTHO05D000010 6.2e-10 69.3 83 48.2
Haze_17211 Corylus avellana HOM05D000021 ORTHO05D000010 8.2e-10 68.9 160 40.0
Lj8P554T3 Lonicera japonica HOM05D000021 ORTHO05D000010 8.2e-10 68.9 167 38.9
SalBow7G3226 Salvia bowleyana HOM05D000021 ORTHO05D000010 8.2e-10 68.9 171 42.1
FvH4_7g07260 Fragaria vesca HOM05D000021 ORTHO05D000010 1.4e-09 68.2 186 36.0
Rhsim11G0057100 Rhododendron simsii HOM05D000021 ORTHO05D000010 1.4e-09 68.2 86 45.3
PGSC0003DMG400007758 Solanum tuberosum HOM05D000021 ORTHO05D000010 1.4e-09 68.2 169 41.4
vmacro02990 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 1.8e-09 67.8 121 34.7
Cc00_g24410 Coffea canephora HOM05D000021 ORTHO05D000010 2.4e-09 67.4 167 45.5
Eucgr.E00436 Eucalyptus grandis HOM05D000021 ORTHO05D000010 2.4e-09 67.4 151 33.8
Lj5P347T18 Lonicera japonica HOM05D000021 ORTHO05D000010 2.4e-09 67.4 146 44.5
TAR636G2483 Trochodendron aralioides HOM05D000021 ORTHO05D000010 2.4e-09 67.4 196 43.4
Rhsim13G0070900 Rhododendron simsii HOM05D000021 ORTHO05D000010 3.1e-09 67.0 197 44.2
Eucgr.D01545 Eucalyptus grandis HOM05D000021 ORTHO05D000010 4.1e-09 66.6 82 45.1
Eucgr.G01141 Eucalyptus grandis HOM05D000021 ORTHO05D000010 4.1e-09 66.6 110 38.2
QL05p040370 Quercus lobata HOM05D000021 ORTHO05D000010 5.3e-09 66.2 159 38.4
MSTRG.1543 Avicennia marina HOM05D000021 ORTHO05D000010 6.9e-09 65.9 64 54.7
Migut.G01063 Erythranthe guttata HOM05D000021 ORTHO05D000010 6.9e-09 65.9 166 42.8
Rhsim11G0056600 Rhododendron simsii HOM05D000021 ORTHO05D000010 9.0e-09 65.5 52 63.5
Rhsim11G0057600 Rhododendron simsii HOM05D000021 ORTHO05D000010 9.0e-09 65.5 83 48.2
RcHm_v2.0_Chr5g0011351 Rosa chinensis HOM05D000021 ORTHO05D000010 9.0e-09 65.5 198 41.9
Cc10_g10450 Coffea canephora HOM05D000021 ORTHO05D000010 1.5e-08 64.7 169 33.7
SalBow6G0854 Salvia bowleyana HOM05D000021 ORTHO05D000010 1.5e-08 64.7 176 39.8
Cc08_g08730 Coffea canephora HOM05D000021 ORTHO05D000010 2.0e-08 64.3 184 40.8
Migut.E01653 Erythranthe guttata HOM05D000021 ORTHO05D000010 2.0e-08 64.3 138 49.3
Migut.G00815 Erythranthe guttata HOM05D000021 ORTHO05D000010 2.0e-08 64.3 122 32.0
Nn2g15116 Nelumbo nucifera HOM05D000021 ORTHO05D000010 2.0e-08 64.3 144 51.4
PGSC0003DMG400006065 Solanum tuberosum HOM05D000021 ORTHO05D000010 2.6e-08 63.9 149 38.3
Manes.10G014500 Manihot esculenta HOM05D000021 ORTHO05D000010 3.4e-08 63.5 145 48.3
TAR633G2540 Trochodendron aralioides HOM05D000021 ORTHO05D000010 3.4e-08 63.5 149 47.0
Ciclev10024426m.g Citrus clementina HOM05D000021 ORTHO05D000010 4.5e-08 63.2 169 46.7
Eucgr.C01832 Eucalyptus grandis HOM05D000021 ORTHO05D000010 5.8e-08 62.8 84 41.7
FAN06G2409 Fragaria x ananassa HOM05D000021 ORTHO05D000010 7.6e-08 62.4 148 46.6
Aa31LG4G14500 Aethionema arabicum HOM05D000021 ORTHO05D000010 1.0e-07 62.0 192 32.8
Eucgr.G01159 Eucalyptus grandis HOM05D000021 ORTHO05D000010 1.3e-07 61.6 80 45.0
TWI38G0320 Tripterygium wilfordii HOM05D000021 ORTHO05D000010 1.3e-07 61.6 169 43.2
Cc00_g35350 Coffea canephora HOM05D000021 ORTHO05D000010 1.7e-07 61.2 189 40.2
Eucgr.C01543 Eucalyptus grandis HOM05D000021 ORTHO05D000010 1.7e-07 61.2 86 43.0
Eucgr.D01556 Eucalyptus grandis HOM05D000021 ORTHO05D000010 1.7e-07 61.2 127 31.5
MBI05_g26517_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 1.7e-07 61.2 89 41.6
SalBow3G2570 Salvia bowleyana HOM05D000021 ORTHO05D000010 1.7e-07 61.2 72 44.4
CiPaw.05G135900 Carya illinoinensis HOM05D000021 ORTHO05D000010 2.2e-07 60.8 114 37.7
Dinv22125 Davidia involucrata HOM05D003883 ORTHO05D004605 2.2e-07 60.8 184 27.7
vmacro12478 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 2.2e-07 60.8 55 58.2
Eucgr.C01820 Eucalyptus grandis HOM05D000021 ORTHO05D000010 2.9e-07 60.5 55 54.5
Eucgr.C01828 Eucalyptus grandis HOM05D000021 ORTHO05D000010 2.9e-07 60.5 55 54.5
Eucgr.G01153 Eucalyptus grandis HOM05D000021 ORTHO05D000010 2.9e-07 60.5 55 56.4
Eucgr.G01169 Eucalyptus grandis HOM05D000021 ORTHO05D000010 3.8e-07 60.1 84 57.1
SGA_v2.0_scaffold24G10546 Striga asiatica HOM05D000021 ORTHO05D000010 3.8e-07 60.1 156 47.4
MD07G1219300 Malus domestica HOM05D000021 ORTHO05D000010 5.0e-07 59.7 180 29.4
RhsimUnG0036700 Rhododendron simsii HOM05D000021 ORTHO05D000010 5.0e-07 59.7 142 46.5
TAR623G1773 Trochodendron aralioides HOM05D000021 ORTHO05D000010 5.0e-07 59.7 199 51.3
CAN.G404.29 Capsicum annuum HOM05D000021 ORTHO05D000010 6.5e-07 59.3 166 28.9
Migut.G01044 Erythranthe guttata HOM05D000021 ORTHO05D000010 6.5e-07 59.3 87 39.1
Eucgr.D01564 Eucalyptus grandis HOM05D000021 ORTHO05D000010 6.5e-07 59.3 144 38.9
Lj3P711T17 Lonicera japonica HOM05D000021 ORTHO05D000010 6.5e-07 59.3 144 30.6
Rhsim05G0179100 Rhododendron simsii HOM05D000021 ORTHO05D000010 6.5e-07 59.3 76 46.1
CAN.G525.63 Capsicum annuum HOM05D000021 ORTHO05D000010 8.4e-07 58.9 160 37.5
MBI15_g41442_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 8.4e-07 58.9 86 41.9
Os06g0585982 Oryza sativa ssp. japonica HOM05D000021 ORTHO05D000010 8.4e-07 58.9 86 40.7
Duzib268G0591 Durio zibethinus HOM05D000021 ORTHO05D000010 1.1e-06 58.5 164 40.9
Eucgr.C01567 Eucalyptus grandis HOM05D000021 ORTHO05D000010 1.1e-06 58.5 86 40.7
Eucgr.C01826 Eucalyptus grandis HOM05D000021 ORTHO05D000010 1.1e-06 58.5 55 52.7
Thhalv10010172m.g Eutrema salsugineum HOM05D000021 ORTHO05D000010 1.1e-06 58.5 187 39.6
HanXRQChr06g0165281 Helianthus annuus HOM05D000021 ORTHO05D000010 1.1e-06 58.5 147 30.6
TWI09G0802 Tripterygium wilfordii HOM05D000021 ORTHO05D000010 1.1e-06 58.5 169 39.1
Aqoxy1G03445 Aquilegia oxysepala HOM05D020225 ORTHO05D015223 1.4e-06 58.2 160 41.9
CSS0026927 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 1.4e-06 58.2 141 42.6
CAN.G1642.9 Capsicum annuum HOM05D002350 ORTHO05D000091 1.4e-06 58.2 171 42.7
Cpa.g.sc29.186 Carica papaya HOM05D020225 ORTHO05D011302 1.4e-06 58.2 69 40.6
Duzib106G0924 Durio zibethinus HOM05D000021 ORTHO05D000010 1.4e-06 58.2 155 39.4
Eucgr.D01566 Eucalyptus grandis HOM05D000021 ORTHO05D000010 1.4e-06 58.2 55 52.7
MBI16_g37126_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 1.4e-06 58.2 86 43.0
Eucgr.C01565 Eucalyptus grandis HOM05D000021 ORTHO05D000010 1.9e-06 57.8 72 44.4
Eucgr.D01571 Eucalyptus grandis HOM05D000021 ORTHO05D000010 1.9e-06 57.8 84 51.2
Eucgr.F02590 Eucalyptus grandis HOM05D000021 ORTHO05D000010 1.9e-06 57.8 74 45.9
Manes.07G016800 Manihot esculenta HOM05D000021 ORTHO05D000010 1.9e-06 57.8 140 30.7
Manes.07G127602 Manihot esculenta HOM05D000021 ORTHO05D000010 2.5e-06 57.4 90 53.3
Nn2g11444 Nelumbo nucifera HOM05D000021 ORTHO05D000010 2.5e-06 57.4 133 33.8
Nitab4.5_0001288g0110 Nicotiana tabacum HOM05D000021 ORTHO05D000010 2.5e-06 57.4 151 33.1
PGR004G1441 Punica granatum HOM05D000021 ORTHO05D000010 2.5e-06 57.4 87 39.1
Aqoxy4G01440 Aquilegia oxysepala HOM05D000021 ORTHO05D000010 3.2e-06 57.0 145 46.2
CAN.G1909.7 Capsicum annuum HOM05D000021 ORTHO05D000010 3.2e-06 57.0 176 26.7
Cpa.g.sc112.36 Carica papaya HOM05D000021 ORTHO05D000010 3.2e-06 57.0 83 38.6
Cc02_g16030 Coffea canephora HOM05D000021 ORTHO05D000010 3.2e-06 57.0 165 40.6
MBI05_g42604_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 3.2e-06 57.0 204 32.8
RhsimUnG0036900 Rhododendron simsii HOM05D000021 ORTHO05D000010 3.2e-06 57.0 164 48.2
RcHm_v2.0_Chr5g0043501 Rosa chinensis HOM05D000021 ORTHO05D000010 3.2e-06 57.0 152 42.1
Eucgr.D01548 Eucalyptus grandis HOM05D000021 ORTHO05D000010 4.2e-06 56.6 84 53.6
Lj4A573G41 Lonicera japonica HOM05D000021 ORTHO05D000010 4.2e-06 56.6 167 42.5
QL03p026383 Quercus lobata HOM05D000021 ORTHO05D000010 4.2e-06 56.6 169 43.8
CAN.G619.29 Capsicum annuum HOM05D000021 ORTHO05D000010 5.5e-06 56.2 168 36.9
MD04G1118700 Malus domestica HOM05D000021 ORTHO05D000010 5.5e-06 56.2 145 37.9
Migut.B00959 Erythranthe guttata HOM05D000021 ORTHO05D000010 7.2e-06 55.8 87 36.8
Migut.G01050 Erythranthe guttata HOM05D000021 ORTHO05D000010 7.2e-06 55.8 77 36.4
Migut.G01218 Erythranthe guttata HOM05D000021 ORTHO05D000010 7.2e-06 55.8 76 43.4
Lj2g0025576 Lotus japonicus HOM05D000021 ORTHO05D000010 7.2e-06 55.8 90 37.8
Medtr2g016580 Medicago truncatula HOM05D000021 ORTHO05D000010 7.2e-06 55.8 161 39.8
Os12g0498650 Oryza sativa ssp. japonica HOM05D000021 ORTHO05D000010 7.2e-06 55.8 71 43.7
Potri.018G020000 Populus trichocarpa HOM05D000021 ORTHO05D000010 7.2e-06 55.8 90 37.8
TAR375G0565 Trochodendron aralioides HOM05D000021 ORTHO05D000010 7.2e-06 55.8 119 55.5
Eucgr.L00221 Eucalyptus grandis HOM05D000021 ORTHO05D000010 9.3e-06 55.5 168 27.4
Lj3P537T46 Lonicera japonica HOM05D020225 ORTHO05D015223 9.3e-06 55.5 56 48.2
Lj2g0024537 Lotus japonicus HOM05D000021 ORTHO05D000010 9.3e-06 55.5 72 38.9
MBI14_g15316_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 9.3e-06 55.5 69 60.9
QL10p043336 Quercus lobata HOM05D000021 ORTHO05D000010 9.3e-06 55.5 71 42.3


User provided reference genes

Program Settings