Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41722 Davidia involucrata HOM05D000021 ORTHO05D000010 1.0e-77 294.3 280 100.0
Dinv36244 Davidia involucrata HOM05D000021 ORTHO05D000010 2.0e-33 147.1 198 78.3
Dinv41730 Davidia involucrata HOM05D000021 ORTHO05D015223 2.1e-19 100.5 201 58.7
CSS0007625 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 1.7e-13 80.9 87 54.0
CSS0012859 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 1.7e-13 80.9 87 46.0
Dinv41723 Davidia involucrata HOM05D000021 ORTHO05D000010 2.3e-13 80.5 139 51.1
CSS0042411 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 4.3e-12 76.3 78 51.3
CSS0024035 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 5.6e-12 75.9 86 48.8
CSS0002252 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 2.8e-11 73.6 140 62.1
Manes.02G194500 Manihot esculenta HOM05D000021 ORTHO05D000010 4.8e-11 72.8 191 41.9
vmacro00240 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 6.2e-11 72.4 82 61.0
CSS0038113 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 1.8e-10 70.9 84 44.0
SalBow3G2570 Salvia bowleyana HOM05D000021 ORTHO05D000010 1.5e-09 67.8 81 42.0
Dinv41729 Davidia involucrata HOM05D000021 ORTHO05D000010 2.6e-09 67.0 85 57.6
Eucgr.C01543 Eucalyptus grandis HOM05D000021 ORTHO05D000010 5.8e-09 65.9 85 42.4
Eucgr.F02590 Eucalyptus grandis HOM05D000021 ORTHO05D000010 5.8e-09 65.9 77 45.5
CSS0048381 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 7.6e-09 65.5 56 60.7
Eucgr.C01832 Eucalyptus grandis HOM05D000021 ORTHO05D000010 7.6e-09 65.5 83 43.4
Rhsim05G0179100 Rhododendron simsii HOM05D000021 ORTHO05D000010 7.6e-09 65.5 67 50.7
CSS0027587 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 9.9e-09 65.1 133 55.6
Eucgr.G01141 Eucalyptus grandis HOM05D000021 ORTHO05D000010 9.9e-09 65.1 87 39.1
Eucgr.D01566 Eucalyptus grandis HOM05D000021 ORTHO05D000010 1.3e-08 64.7 86 40.7
Eucgr.D01571 Eucalyptus grandis HOM05D000021 ORTHO05D000010 1.7e-08 64.3 86 50.0
vmacro12477 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 1.7e-08 64.3 56 55.4
Rhsim11G0057200 Rhododendron simsii HOM05D000021 ORTHO05D000010 3.8e-08 63.2 189 43.9
Eucgr.D01548 Eucalyptus grandis HOM05D000021 ORTHO05D000010 4.9e-08 62.8 86 51.2
Rhsim11G0056600 Rhododendron simsii HOM05D000021 ORTHO05D000010 4.9e-08 62.8 75 44.0
MBI14_g06609_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 8.4e-08 62.0 74 47.3
Rhsim11G0057100 Rhododendron simsii HOM05D000021 ORTHO05D000010 8.4e-08 62.0 87 36.8
Eucgr.C01554 Eucalyptus grandis HOM05D000021 ORTHO05D000010 1.1e-07 61.6 60 51.7
Prupe.6G275100 Prunus persica HOM05D000021 ORTHO05D000010 1.1e-07 61.6 88 39.8
Eucgr.C01567 Eucalyptus grandis HOM05D000021 ORTHO05D000010 1.4e-07 61.2 85 38.8
Rhsim11G0057300 Rhododendron simsii HOM05D000021 ORTHO05D000010 1.4e-07 61.2 84 39.3
TAR633G2540 Trochodendron aralioides HOM05D000021 ORTHO05D000010 1.4e-07 61.2 91 42.9
Nn2g15116 Nelumbo nucifera HOM05D000021 ORTHO05D000010 1.9e-07 60.8 70 42.9
Os11g0569733 Oryza sativa ssp. japonica HOM05D000021 ORTHO05D000010 1.9e-07 60.8 85 42.4
BcaB06g28225 Brassica carinata HOM05D000021 ORTHO05D000010 2.4e-07 60.5 83 39.8
Eucgr.C01828 Eucalyptus grandis HOM05D000021 ORTHO05D000010 3.2e-07 60.1 87 48.3
Eucgr.D01568 Eucalyptus grandis HOM05D000021 ORTHO05D000010 3.2e-07 60.1 81 39.5
Eucgr.G01169 Eucalyptus grandis HOM05D000021 ORTHO05D000010 3.2e-07 60.1 84 51.2
vmacro12478 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 3.2e-07 60.1 86 51.2
MBI05_g03467_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 4.2e-07 59.7 64 62.5
MBI05_g42604_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 4.2e-07 59.7 92 39.1
MBI14_g39025_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 4.2e-07 59.7 90 38.9
MBI14_g39237_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 5.4e-07 59.3 73 45.2
MBI16_g37126_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 5.4e-07 59.3 84 45.2
QL06p003691 Quercus lobata HOM05D000021 ORTHO05D000010 5.4e-07 59.3 86 40.7
TAR633G1487 Trochodendron aralioides HOM05D000021 ORTHO05D000010 5.4e-07 59.3 90 40.0
BolC3t13820H Brassica oleracea HOM05D000021 ORTHO05D000010 7.1e-07 58.9 69 44.9
Cpa.g.sc7.107 Carica papaya HOM05D000021 ORTHO05D000010 7.1e-07 58.9 197 44.7
Ciclev10018315m.g Citrus clementina HOM05D000021 ORTHO05D000010 7.1e-07 58.9 194 42.8
Migut.G01044 Erythranthe guttata HOM05D000021 ORTHO05D000010 7.1e-07 58.9 83 34.9
Lj8P554T3 Lonicera japonica HOM05D000021 ORTHO05D000010 7.1e-07 58.9 83 41.0
MBI05_g26516_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 7.1e-07 58.9 86 40.7
MBI06_g06505_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 7.1e-07 58.9 86 40.7
MBI14_g29545_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 7.1e-07 58.9 86 43.0
Prupe.1G200500 Prunus persica HOM05D000021 ORTHO05D000010 7.1e-07 58.9 90 40.0
Eucgr.C01820 Eucalyptus grandis HOM05D000021 ORTHO05D000010 9.3e-07 58.5 58 50.0
Eucgr.C01826 Eucalyptus grandis HOM05D000021 ORTHO05D000010 9.3e-07 58.5 58 50.0
TAR594G0001 Trochodendron aralioides HOM05D000021 ORTHO05D000010 9.3e-07 58.5 91 41.8
Dinv28630 Davidia involucrata HOM05D000021 ORTHO05D000010 1.2e-06 58.2 77 40.3
MBI05_g26517_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 1.2e-06 58.2 86 40.7
TAR375G0565 Trochodendron aralioides HOM05D000021 ORTHO05D000010 1.2e-06 58.2 90 37.8
TAR633G2783 Trochodendron aralioides HOM05D000021 ORTHO05D000010 1.2e-06 58.2 66 45.5
CAN.G866.20 Capsicum annuum HOM05D000021 ORTHO05D000010 1.6e-06 57.8 194 49.5
Eucgr.C01565 Eucalyptus grandis HOM05D000021 ORTHO05D000010 1.6e-06 57.8 79 40.5
Psat0s2617g0200 Pisum sativum HOM05D000021 ORTHO05D000010 1.6e-06 57.8 90 38.9
Rhsim11G0057500 Rhododendron simsii HOM05D000021 ORTHO05D000010 1.6e-06 57.8 87 44.8
MSTRG.1543 Avicennia marina HOM05D000021 ORTHO05D000010 2.1e-06 57.4 63 44.4
BraA03t10926Z Brassica rapa HOM05D000021 ORTHO05D000010 2.1e-06 57.4 84 40.5
MBI14_g38384_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 2.1e-06 57.4 142 38.0
Migut.G01218 Erythranthe guttata HOM05D000021 ORTHO05D000010 2.7e-06 57.0 83 38.6
MBI14_g38383_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 2.7e-06 57.0 90 35.6
MBI14_g38386_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 2.7e-06 57.0 90 34.4
QL06p004049 Quercus lobata HOM05D000021 ORTHO05D000010 2.7e-06 57.0 63 44.4
Migut.G01211 Erythranthe guttata HOM05D000021 ORTHO05D000010 3.5e-06 56.6 80 36.2
Eucgr.D01545 Eucalyptus grandis HOM05D000021 ORTHO05D000010 3.5e-06 56.6 83 37.3
Eucgr.G01159 Eucalyptus grandis HOM05D000021 ORTHO05D000010 3.5e-06 56.6 74 43.2
MBI14_g15316_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 3.5e-06 56.6 90 50.0
MBI15_g41442_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 3.5e-06 56.6 84 39.3
MD04G1110500 Malus domestica HOM05D000021 ORTHO05D000010 3.5e-06 56.6 90 37.8
MD12G1134600 Malus domestica HOM05D000021 ORTHO05D000010 3.5e-06 56.6 91 36.3
Rhsim11G0056700 Rhododendron simsii HOM05D000021 ORTHO05D000010 3.5e-06 56.6 79 49.4
Haze_24289 Corylus avellana HOM05D000021 ORTHO05D016122 4.6e-06 56.2 71 42.3
MBI16_g28612_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D000010 4.6e-06 56.2 73 43.8
Nn1g08503 Nelumbo nucifera HOM05D000021 ORTHO05D000010 4.6e-06 56.2 89 46.1
CSS0026927 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 6.0e-06 55.8 66 43.9
CSS0030191 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 6.0e-06 55.8 141 50.4
CAN.G189.69 Capsicum annuum HOM05D000021 ORTHO05D000010 6.0e-06 55.8 89 38.2
COL.COLO4_08323 Corchorus olitorius HOM05D000021 ORTHO05D000010 6.0e-06 55.8 85 38.8
Migut.G01210 Erythranthe guttata HOM05D000021 ORTHO05D000010 6.0e-06 55.8 89 32.6
Eucgr.D01564 Eucalyptus grandis HOM05D000021 ORTHO05D000010 6.0e-06 55.8 74 40.5
MBI05_g03440_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 6.0e-06 55.8 92 40.2
MBI14_g25728_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 6.0e-06 55.8 90 44.4
MBI14_g36978_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 6.0e-06 55.8 90 41.1
Os02g0216000 Oryza sativa ssp. japonica HOM05D000021 ORTHO05D000010 6.0e-06 55.8 89 38.2
Rhsim11G0057600 Rhododendron simsii HOM05D000021 ORTHO05D000010 6.0e-06 55.8 80 38.8
PGSC0003DMG400006065 Solanum tuberosum HOM05D000021 ORTHO05D000010 6.0e-06 55.8 195 34.4
TAR623G0409 Trochodendron aralioides HOM05D000021 ORTHO05D000010 6.0e-06 55.8 69 56.5
TAR624G1213 Trochodendron aralioides HOM05D000021 ORTHO05D000010 6.0e-06 55.8 91 38.5
Thhalv10010172m.g Eutrema salsugineum HOM05D000021 ORTHO05D000010 7.9e-06 55.5 186 44.6
Lj3P711T17 Lonicera japonica HOM05D000021 ORTHO05D000010 7.9e-06 55.5 85 37.6
MBI16_g11666_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 7.9e-06 55.5 88 39.8
MD04G1157800 Malus domestica HOM05D000021 ORTHO05D000010 7.9e-06 55.5 85 38.8
MD07G1218000 Malus domestica HOM05D000021 ORTHO05D000010 7.9e-06 55.5 90 35.6
PGR102G2774 Punica granatum HOM05D000021 ORTHO05D000010 7.9e-06 55.5 64 42.2
Sp5g14630 Schrenkiella parvula HOM05D000021 ORTHO05D000010 7.9e-06 55.5 68 44.1
PGSC0003DMG400007758 Solanum tuberosum HOM05D000021 ORTHO05D000010 7.9e-06 55.5 174 42.5


User provided reference genes

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