Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41697 Davidia involucrata HOM05D011855 ORTHO05D011609 1.0e-117 426.8 219 100.0
Potri.019G084400 Populus trichocarpa HOM05D012719 ORTHO05D011609 2.6e-44 183.0 194 51.5
Thecc.08G181900 Theobroma cacao HOM05D011855 ORTHO05D011609 2.6e-44 183.0 209 49.8
Potri.013G113800 Populus trichocarpa HOM05D012719 ORTHO05D011609 1.3e-43 180.6 210 46.7
Cfa018193 Carpinus fangiana HOM05D012719 ORTHO05D011609 2.6e-41 172.9 215 50.2
Haze_17921 Corylus avellana HOM05D004678 ORTHO05D005880 1.3e-40 170.6 220 48.2
Ah.05g178050 Amaranthus hybridus HOM05D012719 ORTHO05D011609 1.9e-39 166.8 189 51.9
Nn5g27743 Nelumbo nucifera HOM05D011855 ORTHO05D011609 4.2e-39 165.6 207 47.8
Haze_17923 Corylus avellana HOM05D012719 ORTHO05D011609 2.7e-38 162.9 216 48.1
AUR62004652 Chenopodium quinoa HOM05D012719 ORTHO05D011609 1.1e-36 157.5 193 45.1
AUR62023571 Chenopodium quinoa HOM05D012719 ORTHO05D011609 1.3e-35 154.1 193 46.1
Nitab4.5_0000560g0170 Nicotiana tabacum HOM05D011855 ORTHO05D011609 2.6e-33 146.4 205 41.0
Sc01g0001740 Simmondsia chinensis HOM05D011855 ORTHO05D011609 8.8e-29 131.3 196 43.4
COL.COLO4_19764 Corchorus olitorius HOM05D012719 ORTHO05D011609 9.7e-28 127.9 221 37.6
CAN.G370.24 Capsicum annuum HOM05D011855 ORTHO05D011609 3.5e-25 119.4 203 36.5
Cc10_g11370 Coffea canephora HOM05D011855 ORTHO05D011609 1.8e-21 107.1 163 38.0
Solyc11g017410.1 Solanum lycopersicum HOM05D011855 ORTHO05D011609 2.6e-20 103.2 221 31.7
Sopen11g009360 Solanum pennellii HOM05D011855 ORTHO05D011609 5.7e-20 102.1 206 33.5
PGSC0003DMG400009225 Solanum tuberosum HOM05D011855 ORTHO05D011609 2.2e-19 100.1 203 33.0
HPP92_016119 Vanilla planifolia HOM05D012719 ORTHO05D011609 4.8e-19 99.0 211 32.2
Cpa.g.sc66.50 Carica papaya HOM05D011855 ORTHO05D011609 5.9e-17 92.0 209 36.8
HPP92_011411 Vanilla planifolia HOM05D012719 ORTHO05D011609 1.0e-13 81.3 193 32.6
HPP92_004458 Vanilla planifolia HOM05D012719 ORTHO05D011609 1.3e-11 74.3 195 32.3
ATR0152G020 Amborella trichopoda HOM05D011855 ORTHO05D011609 3.7e-11 72.8 174 27.0
SEGI_01544 Sequoiadendron giganteum HOM05D002421 ORTHO05D002560 2.3e-08 63.5 193 25.4
SEGI_40655 Sequoiadendron giganteum HOM05D002421 ORTHO05D002560 2.3e-08 63.5 193 25.4
AagrBONN_evm.TU.Sc2ySwM_344.2059 Anthoceros agrestis HOM05D002421 ORTHO05D002560 6.6e-08 62.0 171 29.8
Sabra19G0095500 Salix brachista HOM05D012719 ORTHO05D011609 1.1e-07 61.2 109 37.6
Zm00001eb168890 Zea mays HOM05D065905 ORTHO05D011609 5.6e-07 58.9 118 28.8
MELO3C021186.2 Cucumis melo HOM05D002440 ORTHO05D002576 7.3e-07 58.5 129 33.3
Gorai.005G092200 Gossypium raimondii HOM05D002421 ORTHO05D002560 7.3e-07 58.5 88 36.4
COL.COLO4_16527 Corchorus olitorius HOM05D002421 ORTHO05D002560 9.5e-07 58.2 128 30.5
CsaV3_6G000840 Cucumis sativus L. HOM05D002440 ORTHO05D002576 2.1e-06 57.0 129 33.3
Os11g0198200 Oryza sativa ssp. japonica HOM05D065905 ORTHO05D011609 2.1e-06 57.0 123 27.6
AagrBONN_evm.TU.Sc2ySwM_228.1861 Anthoceros agrestis HOM05D025282 ORTHO05D023513 2.8e-06 56.6 119 30.3
Gohir.A02G075200 Gossypium hirsutum HOM05D002421 ORTHO05D002560 3.6e-06 56.2 88 35.2
Gohir.D02G082300 Gossypium hirsutum HOM05D002421 ORTHO05D002560 3.6e-06 56.2 98 32.7
Mapoly0005s0250 Marchantia polymorpha HOM05D002421 ORTHO05D002560 3.6e-06 56.2 146 32.2
Thecc.08G115500 Theobroma cacao HOM05D002421 ORTHO05D002560 3.6e-06 56.2 226 28.8
Duzib093G2137 Durio zibethinus HOM05D002421 ORTHO05D002560 4.7e-06 55.8 226 28.8
Duzib116G0924 Durio zibethinus HOM05D002421 ORTHO05D002560 6.1e-06 55.5 112 31.2
Pp3c20_4070 Physcomitrium patens HOM05D025282 ORTHO05D023513 6.1e-06 55.5 106 26.4
PGR042G2169 Punica granatum HOM05D002421 ORTHO05D002560 6.1e-06 55.5 100 34.0
Actinidia02590 Actinidia chinensis HOM05D002421 ORTHO05D002560 8.0e-06 55.1 101 33.7
Lalb_Chr15g0090671 Lupinus albus HOM05D002421 ORTHO05D002560 8.0e-06 55.1 189 26.5
Mapoly0009s0090 Marchantia polymorpha HOM05D025282 ORTHO05D023513 8.0e-06 55.1 115 27.0
Medtr8g088750 Medicago truncatula HOM05D002421 ORTHO05D002560 8.0e-06 55.1 89 37.1


User provided reference genes

Program Settings