Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41667 Davidia involucrata HOM05D003954 ORTHO05D004627 7.1e-231 803.5 389 100.0
Hma1.2p1_0571F.1_g180650 Hydrangea macrophylla HOM05D003954 ORTHO05D004627 1.2e-201 706.4 380 89.7
Actinidia09446 Actinidia chinensis HOM05D003954 ORTHO05D004627 4.5e-201 704.5 380 88.9
vmacro06252 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 4.5e-201 704.5 380 88.4
Cpa.g.sc40.95 Carica papaya HOM05D003954 ORTHO05D004627 7.6e-201 703.7 380 87.4
CSS0001350 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 6.5e-200 700.7 381 87.9
Thecc.09G100700 Theobroma cacao HOM05D003954 ORTHO05D004627 5.5e-199 697.6 380 87.1
Duzib168G1367 Durio zibethinus HOM05D003954 ORTHO05D004627 3.5e-198 694.9 380 86.1
Actinidia07454 Actinidia chinensis HOM05D003954 ORTHO05D004627 6.0e-198 694.1 414 82.4
TWI34G0439 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 3.9e-197 691.4 380 85.8
Actinidia39784 Actinidia chinensis HOM05D003954 ORTHO05D004627 6.7e-197 690.6 380 87.6
Manes.03G027300 Manihot esculenta HOM05D003954 ORTHO05D004627 1.1e-196 689.9 380 85.8
GSVIVG01015303001 Vitis vinifera HOM05D003954 ORTHO05D004627 1.9e-196 689.1 378 86.8
Manes.16G108600 Manihot esculenta HOM05D003954 ORTHO05D004627 3.3e-196 688.3 374 87.2
Gohir.D06G065800 Gossypium hirsutum HOM05D003954 ORTHO05D004627 1.3e-195 686.4 374 86.6
Gohir.A06G067200 Gossypium hirsutum HOM05D003954 ORTHO05D004627 2.8e-195 685.3 374 86.4
Migut.K00540 Erythranthe guttata HOM05D003954 ORTHO05D004627 3.1e-194 681.8 375 85.9
Cc06_g10470 Coffea canephora HOM05D003954 ORTHO05D004627 1.5e-193 679.5 375 85.9
Gohir.A05G025900 Gossypium hirsutum HOM05D003954 ORTHO05D004627 2.0e-193 679.1 380 83.9
Gorai.009G027500 Gossypium raimondii HOM05D003954 ORTHO05D004627 2.0e-193 679.1 380 83.9
SGA_v2.0_scaffold62G21557 Striga asiatica HOM05D003954 ORTHO05D004627 4.5e-193 677.9 380 83.9
Ca_17364_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 7.7e-193 677.2 375 83.7
CiPaw.04G158000 Carya illinoinensis HOM05D003954 ORTHO05D004627 1.0e-192 676.8 380 83.4
Glyma.08G033600 Glycine max HOM05D003954 ORTHO05D004627 1.0e-192 676.8 375 84.8
Oeu064178.1 Olea europaea HOM05D003954 ORTHO05D004627 1.3e-192 676.4 380 85.5
Cfa003181 Carpinus fangiana HOM05D003954 ORTHO05D004627 2.2e-192 675.6 380 83.9
FvH4_1g06110 Fragaria vesca HOM05D003954 ORTHO05D004627 2.2e-192 675.6 383 83.3
Ciclev10008006m.g Citrus clementina HOM05D003954 ORTHO05D004627 2.9e-192 675.2 380 84.2
QL02p041611 Quercus lobata HOM05D003954 ORTHO05D004627 2.9e-192 675.2 380 83.7
EL10Ac8g18378 Beta vulgaris HOM05D003954 ORTHO05D004627 8.5e-192 673.7 380 83.7
MSTRG.19554 Avicennia marina HOM05D003954 ORTHO05D004627 4.2e-191 671.4 380 84.2
Eucgr.C03729 Eucalyptus grandis HOM05D003954 ORTHO05D004627 4.2e-191 671.4 380 83.9
Nn8g39063 Nelumbo nucifera HOM05D003954 ORTHO05D004627 5.5e-191 671.0 379 85.5
Potri.006G164864 Populus trichocarpa HOM05D003954 ORTHO05D004627 5.5e-191 671.0 372 84.7
Hund09103 Selenicereus undatus HOM05D003954 ORTHO05D004627 5.5e-191 671.0 380 83.7
Glyma.05G226800 Glycine max HOM05D003954 ORTHO05D004627 7.2e-191 670.6 379 83.1
Gorai.010G077100 Gossypium raimondii HOM05D003954 ORTHO05D004627 9.4e-191 670.2 399 80.7
TAR624G0841 Trochodendron aralioides HOM05D003954 ORTHO05D004627 9.4e-191 670.2 380 85.0
Sabra18G0076000 Salix brachista HOM05D003954 ORTHO05D004627 1.6e-190 669.5 375 83.5
Lj4g0018527 Lotus japonicus HOM05D003954 ORTHO05D004627 2.7e-190 668.7 375 84.8
VMungo0251G2014 Vigna mungo HOM05D003954 ORTHO05D004627 2.7e-190 668.7 375 84.0
Gohir.D05G027400 Gossypium hirsutum HOM05D003954 ORTHO05D004627 3.6e-190 668.3 390 81.5
CiPaw.03G225300 Carya illinoinensis HOM05D003954 ORTHO05D004627 6.1e-190 667.5 373 83.9
Phvul.002G308700 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 6.1e-190 667.5 375 84.0
THA.LOC104814571 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 1.0e-189 666.8 380 83.4
Potri.018G087700 Populus trichocarpa HOM05D003954 ORTHO05D004627 1.4e-189 666.4 375 83.5
Medtr8g102500 Medicago truncatula HOM05D003954 ORTHO05D004627 2.3e-189 665.6 375 81.9
Nitab4.5_0005668g0030 Nicotiana tabacum HOM05D003954 ORTHO05D004627 1.5e-188 662.9 375 85.3
Nitab4.5_0000566g0060 Nicotiana tabacum HOM05D003954 ORTHO05D004627 2.5e-188 662.1 375 85.3
RcHm_v2.0_Chr2g0091861 Rosa chinensis HOM05D003954 ORTHO05D004627 3.3e-188 661.8 379 83.9
Carub.0003s3415 Capsella rubella HOM05D003954 ORTHO05D004627 7.4e-188 660.6 380 81.1
TAR633G1204 Trochodendron aralioides HOM05D003954 ORTHO05D004627 1.7e-187 659.4 380 83.7
Sp3g33220 Schrenkiella parvula HOM05D003954 ORTHO05D004627 2.2e-187 659.1 381 81.4
FAN28G0221 Fragaria x ananassa HOM05D003954 ORTHO05D004627 3.7e-187 658.3 382 82.2
MD02G1065600 Malus domestica HOM05D003954 ORTHO05D004627 6.3e-187 657.5 380 82.1
Peaxi162Scf00665g00340 Petunia axillaris HOM05D003954 ORTHO05D004627 6.3e-187 657.5 373 84.2
Sc08g0008010 Simmondsia chinensis HOM05D003954 ORTHO05D004627 8.2e-187 657.1 380 80.8
FAN19G1313 Fragaria x ananassa HOM05D003954 ORTHO05D004627 1.1e-186 656.8 382 82.2
AUR62021404 Chenopodium quinoa HOM05D003954 ORTHO05D004627 1.4e-186 656.4 380 81.1
Thhalv10001962m.g Eutrema salsugineum HOM05D003954 ORTHO05D004627 1.8e-186 656.0 381 80.6
CAN.G1241.30 Capsicum annuum HOM05D003954 ORTHO05D004627 2.4e-186 655.6 373 84.2
FAN26G2983 Fragaria x ananassa HOM05D003954 ORTHO05D004627 2.4e-186 655.6 382 81.9
Sc18g0001490 Simmondsia chinensis HOM05D003954 ORTHO05D004627 5.3e-186 654.4 379 82.8
CARHR110320 Cardamine hirsuta HOM05D003954 ORTHO05D004627 6.9e-186 654.1 381 80.1
AUR62010893 Chenopodium quinoa HOM05D003954 ORTHO05D004627 6.9e-186 654.1 380 80.8
FAN26G2948 Fragaria x ananassa HOM05D003954 ORTHO05D004627 6.9e-186 654.1 382 81.7
MD15G1196500 Malus domestica HOM05D003954 ORTHO05D004627 9.1e-186 653.7 381 81.6
arahy.Tifrunner.gnm1.ann1.UV3YSF Arachis hypogaea HOM05D003954 ORTHO05D004627 2.6e-185 652.1 358 85.2
Sed0021958 Sechium edule HOM05D003954 ORTHO05D004627 2.6e-185 652.1 375 82.1
MELO3C015411.2 Cucumis melo HOM05D003954 ORTHO05D004627 3.4e-185 651.7 380 80.8
A09p59090 Brassica napus HOM05D003954 ORTHO05D004627 4.5e-185 651.4 381 79.5
C08p42370 Brassica napus HOM05D003954 ORTHO05D004627 4.5e-185 651.4 381 79.8
BolC8t51799H Brassica oleracea HOM05D003954 ORTHO05D004627 4.5e-185 651.4 381 79.8
THA.LOC104804008 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 7.7e-185 650.6 380 80.5
BcaB08g34891 Brassica carinata HOM05D003954 ORTHO05D004627 1.3e-184 649.8 381 79.5
BcaC07g41232 Brassica carinata HOM05D003954 ORTHO05D004627 1.3e-184 649.8 381 79.5
CsaV3_1G039780 Cucumis sativus L. HOM05D003954 ORTHO05D004627 1.3e-184 649.8 380 80.0
AL3G48340 Arabidopsis lyrata HOM05D003954 ORTHO05D004627 2.2e-184 649.0 381 80.6
BcaC04g22815 Brassica carinata HOM05D003954 ORTHO05D004627 2.2e-184 649.0 376 80.6
C09p15000 Brassica napus HOM05D003954 ORTHO05D004627 2.2e-184 649.0 376 80.6
BraA09t41292Z Brassica rapa HOM05D003954 ORTHO05D004627 2.2e-184 649.0 381 79.0
AT2G19880 Arabidopsis thaliana HOM05D003954 ORTHO05D004627 2.9e-184 648.7 381 80.3
Rhsim03G0236700 Rhododendron simsii HOM05D003954 ORTHO05D004627 3.8e-184 648.3 380 83.9
Sed0027745 Sechium edule HOM05D003954 ORTHO05D004627 5.0e-184 647.9 375 81.6
PGSC0003DMG400000296 Solanum tuberosum HOM05D003954 ORTHO05D004627 8.5e-184 647.1 380 82.9
BolC9t54402H Brassica oleracea HOM05D003954 ORTHO05D004627 1.1e-183 646.7 377 80.6
Migut.J01101 Erythranthe guttata HOM05D003954 ORTHO05D004627 1.1e-183 646.7 375 81.9
MBI01_g10128_MAGBIO Magnolia biondii HOM05D003954 ORTHO05D004627 1.9e-183 646.0 388 80.7
ECA240G1631 Erigeron canadensis HOM05D003954 ORTHO05D004627 4.2e-183 644.8 375 80.8
BcaB03g16776 Brassica carinata HOM05D003954 ORTHO05D004627 7.2e-183 644.0 380 79.5
Lalb_Chr05g0223231 Lupinus albus HOM05D003954 ORTHO05D004627 1.2e-182 643.3 380 79.7
Lalb_Chr09g0331531 Lupinus albus HOM05D003954 ORTHO05D004627 1.2e-182 643.3 380 80.0
Solyc12g008490.2 Solanum lycopersicum HOM05D003954 ORTHO05D004627 1.6e-182 642.9 380 82.1
A07p00800 Brassica napus HOM05D003954 ORTHO05D004627 2.7e-182 642.1 380 78.9
BraA07t27878Z Brassica rapa HOM05D003954 ORTHO05D004627 2.7e-182 642.1 380 78.9
Sopen12g003440 Solanum pennellii HOM05D003954 ORTHO05D004627 2.7e-182 642.1 380 82.1
Lj2g0001823 Lotus japonicus HOM05D003954 ORTHO05D004627 3.6e-182 641.7 381 79.8
Aa31LG8G16830 Aethionema arabicum HOM05D003954 ORTHO05D004627 7.9e-182 640.6 381 78.7
HanXRQChr11g0321631 Helianthus annuus HOM05D003954 ORTHO05D004627 1.0e-181 640.2 380 80.3
CANSAT56G2004 Cannabis sativa HOM05D003954 ORTHO05D004627 1.4e-181 639.8 406 75.4
Dinv36687 Davidia involucrata HOM05D003954 ORTHO05D004627 1.4e-181 639.8 326 93.6
vmacro10852 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 1.4e-181 639.8 380 82.4
HanXRQChr09g0238881 Helianthus annuus HOM05D003954 ORTHO05D004627 1.8e-181 639.4 380 80.0
SGA_v2.0_scaffold19G08753 Striga asiatica HOM05D003954 ORTHO05D004627 1.8e-181 639.4 390 79.2
BcaC06g36652 Brassica carinata HOM05D003954 ORTHO05D004627 2.3e-181 639.0 380 78.7
BolC7t40584H Brassica oleracea HOM05D003954 ORTHO05D004627 2.3e-181 639.0 380 78.7
BraA09t36909Z Brassica rapa HOM05D003954 ORTHO05D004627 3.0e-181 638.6 376 79.8
Psat7g016920 Pisum sativum HOM05D003954 ORTHO05D004627 3.9e-181 638.3 351 84.3
Rhsim05G0040200 Rhododendron simsii HOM05D003954 ORTHO05D004627 3.9e-181 638.3 380 82.6
Psat1g047360 Pisum sativum HOM05D003954 ORTHO05D004627 2.0e-180 636.0 380 77.9
PSO832G3271 Papaver somniferum HOM05D003954 ORTHO05D004627 1.3e-179 633.3 379 79.2
PSO210G6242 Papaver somniferum HOM05D003954 ORTHO05D004627 2.2e-179 632.5 372 80.1
PSO063G1218 Papaver somniferum HOM05D003954 ORTHO05D004627 4.8e-179 631.3 379 78.9
Aqoxy7G01403 Aquilegia oxysepala HOM05D003954 ORTHO05D004627 1.1e-178 630.2 379 78.6
PSO210G3120 Papaver somniferum HOM05D003954 ORTHO05D004627 2.4e-178 629.0 372 79.8
Lalb_Chr24g0397311 Lupinus albus HOM05D003954 ORTHO05D004627 3.1e-178 628.6 380 79.5
Medtr6g088695 Medicago truncatula HOM05D003954 ORTHO05D004627 5.3e-178 627.9 380 77.4
HPP92_001552 Vanilla planifolia HOM05D003954 ORTHO05D004627 2.9e-176 622.1 363 81.3
Duzib187G1161 Durio zibethinus HOM05D003954 ORTHO05D004627 1.9e-175 619.4 380 78.4
Phvul.004G176200 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 1.2e-174 616.7 380 76.8
ATR0681G291 Amborella trichopoda HOM05D003954 ORTHO05D004627 1.6e-174 616.3 369 79.1
Atru.chr7.1463 Acer truncatum HOM05D003954 ORTHO05D004627 2.1e-174 615.9 326 88.3
Glyma.01G007900 Glycine max HOM05D003954 ORTHO05D004627 2.7e-174 615.5 380 76.6
arahy.Tifrunner.gnm1.ann1.KIU7DS Arachis hypogaea HOM05D003954 ORTHO05D004627 4.7e-174 614.8 373 77.5
arahy.Tifrunner.gnm1.ann1.LVXR97 Arachis hypogaea HOM05D003954 ORTHO05D004627 6.1e-174 614.4 332 86.4
TWI32G1148 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 1.4e-173 613.2 380 78.7
arahy.Tifrunner.gnm1.ann1.1X3G68 Arachis hypogaea HOM05D003954 ORTHO05D004627 1.8e-173 612.8 373 77.2
Glyma.16G078400 Glycine max HOM05D003954 ORTHO05D004627 9.7e-172 607.1 380 75.5
FAN23G0884 Fragaria x ananassa HOM05D003954 ORTHO05D004627 6.3e-171 604.4 374 78.1
SalBow6G3745 Salvia bowleyana HOM05D003954 ORTHO05D004627 6.3e-171 604.4 375 76.8
Prupe.7G219900 Prunus persica HOM05D003954 ORTHO05D004627 2.4e-170 602.4 326 86.2
Lj7A665G29 Lonicera japonica HOM05D003954 ORTHO05D004627 9.1e-170 600.5 361 81.4
PGR102G1739 Punica granatum HOM05D003954 ORTHO05D004627 9.1e-170 600.5 380 76.6
Lalb_Chr22g0352551 Lupinus albus HOM05D003954 ORTHO05D004627 1.0e-168 597.0 409 71.9
CSS0033107 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 8.5e-168 594.0 346 83.5
unitig_578.g15920 Utricularia gibba HOM05D003954 ORTHO05D004627 1.7e-163 579.7 397 72.5
Lsat_1_v5_gn_7_39841 Lactuca sativa HOM05D003954 ORTHO05D004627 5.9e-161 571.2 380 73.9
CDE04G2595 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 2.9e-160 568.9 380 72.6
COL.COLO4_34744 Corchorus olitorius HOM05D003954 ORTHO05D004627 1.1e-159 567.0 399 71.7
VMungo0464G1304 Vigna mungo HOM05D003954 ORTHO05D004627 1.8e-157 559.7 378 72.0
CDE07G1077 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 6.8e-157 557.8 321 82.9
TPR.G21381 Trifolium pratense HOM05D003954 ORTHO05D004627 1.3e-155 553.5 401 68.1
DCAR_028664 Daucus carota HOM05D003954 ORTHO05D004627 3.3e-151 538.9 359 74.1
Lsat_1_v5_gn_5_144920 Lactuca sativa HOM05D003954 ORTHO05D004627 1.0e-144 517.3 331 73.7
AagrBONN_evm.TU.Sc2ySwM_228.2751 Anthoceros agrestis HOM05D003954 ORTHO05D004627 2.3e-144 516.2 363 66.7
Medtr8g102490 Medicago truncatula HOM05D003954 ORTHO05D004627 1.5e-143 513.5 368 67.1
SMO367G0175 Selaginella moellendorffii HOM05D003954 ORTHO05D004627 1.4e-141 506.9 343 67.9
Ah.14g083230 Amaranthus hybridus HOM05D003954 ORTHO05D004627 4.4e-140 501.9 380 66.1
Pp3c16_7990 Physcomitrium patens HOM05D003954 ORTHO05D004627 1.2e-137 493.8 374 61.8
Ca_25572_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 3.3e-135 485.7 298 77.5
Zm00001eb365210 Zea mays HOM05D003954 ORTHO05D004627 5.4e-130 468.4 286 76.6
Mapoly0082s0037 Marchantia polymorpha HOM05D003954 ORTHO05D004627 5.6e-127 458.4 361 60.9
SHI02691 Sapria himalayana HOM05D003954 ORTHO05D004627 4.0e-125 452.2 414 57.0
TPR.G23479 Trifolium pratense HOM05D003954 ORTHO05D004627 3.4e-124 449.1 241 85.9
TAR626G0478 Trochodendron aralioides HOM05D003954 ORTHO05D004627 1.1e-109 401.0 216 85.6
SEGI_27682 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 2.6e-108 396.4 244 76.2
Actinidia17525 Actinidia chinensis HOM05D003954 ORTHO05D004627 4.6e-89 332.4 204 80.9
A09p12640 Brassica napus HOM05D003954 ORTHO05D004627 3.7e-70 269.6 153 81.0
Lj4C389T2 Lonicera japonica HOM05D003954 ORTHO05D004627 5.9e-68 262.3 148 84.5
CAN.G3537.1 Capsicum annuum HOM05D003954 ORTHO05D004627 1.1e-66 258.1 148 81.8
MCO02G294 Micromonas commoda HOM05D003954 ORTHO05D004627 1.2e-57 228.0 346 37.6
TPR.G23455 Trifolium pratense HOM05D003954 ORTHO05D004627 1.8e-56 224.2 132 78.0
PRCOL_00001038 Prasinoderma coloniale HOM05D003954 ORTHO05D004627 1.8e-45 187.6 362 33.7
ClCG03G016150 Citrullus lanatus HOM05D003954 ORTHO05D004627 1.7e-38 164.5 103 73.8
Oeu053184.3 Olea europaea HOM05D000113 ORTHO05D010194 1.8e-37 161.0 109 70.6
Actinidia32652 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.2e-36 158.3 95 78.9
Actinidia34604 Actinidia chinensis HOM05D003954 ORTHO05D004627 3.7e-22 110.2 142 51.4
Zm00001eb132850 Zea mays HOM05D003954 ORTHO05D004627 7.0e-21 105.9 59 78.0
MD01G1180200 Malus domestica HOM05D003954 ORTHO05D004627 1.2e-20 105.1 60 81.7
Cre09.g409250 Chlamydomonas reinhardtii HOM05D003954 ORTHO05D004627 2.8e-17 94.0 149 36.9
Actinidia32651 Actinidia chinensis HOM05D003954 ORTHO05D004627 4.0e-16 90.1 165 42.4
CAN.G195.50 Capsicum annuum HOM05D003954 ORTHO05D004627 4.4e-07 60.1 47 61.7
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 6.4e-06 56.2 37 70.3


User provided reference genes

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