Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41635 Davidia involucrata HOM05D002371 ORTHO05D002397 4.0e-81 304.7 152 100.0
Haze_22878 Corylus avellana HOM05D002371 ORTHO05D002397 5.4e-25 118.2 109 64.2
Manes.05G129800 Manihot esculenta HOM05D002371 ORTHO05D002397 5.4e-25 118.2 82 76.8
Atru.chr13.31 Acer truncatum HOM05D002371 ORTHO05D002397 3.5e-24 115.5 78 76.9
TAR628G0414 Trochodendron aralioides HOM05D002371 ORTHO05D002397 4.5e-24 115.2 126 58.7
Aqoxy5G00951 Aquilegia oxysepala HOM05D002371 ORTHO05D002397 5.9e-24 114.8 82 73.2
Nn5g31071 Nelumbo nucifera HOM05D002371 ORTHO05D002397 5.9e-24 114.8 88 72.7
COL.COLO4_20703 Corchorus olitorius HOM05D002371 ORTHO05D002397 7.7e-24 114.4 85 74.1
ATR0605G369 Amborella trichopoda HOM05D002371 ORTHO05D002397 1.3e-23 113.6 71 81.7
Potri.002G002700 Populus trichocarpa HOM05D002371 ORTHO05D002397 1.3e-23 113.6 68 83.8
MBI04_g18017_MAGBIO Magnolia biondii HOM05D002371 ORTHO05D002397 2.2e-23 112.8 79 73.4
Cpa.g.sc36.109 Carica papaya HOM05D002371 ORTHO05D002397 2.9e-23 112.5 85 71.8
Cfa014156 Carpinus fangiana HOM05D002371 ORTHO05D002397 2.9e-23 112.5 73 80.8
Sabra02G0001800 Salix brachista HOM05D002371 ORTHO05D002397 3.8e-23 112.1 68 82.4
Prupe.5G002800 Prunus persica HOM05D002371 ORTHO05D002397 5.0e-23 111.7 88 71.6
QL02p016043 Quercus lobata HOM05D002371 ORTHO05D002397 5.0e-23 111.7 129 55.0
FvH4_5g26470 Fragaria vesca HOM05D002371 ORTHO05D002397 6.5e-23 111.3 80 76.2
FAN08G1439 Fragaria x ananassa HOM05D002371 ORTHO05D002397 6.5e-23 111.3 80 76.2
FAN13G1670 Fragaria x ananassa HOM05D002371 ORTHO05D002397 6.5e-23 111.3 80 76.2
Thecc.10G149300 Theobroma cacao HOM05D002371 ORTHO05D002397 6.5e-23 111.3 79 77.2
CSS0044188 Camellia sinensis var. sinensis HOM05D002371 ORTHO05D002397 1.1e-22 110.5 69 85.5
Duzib114G0087 Durio zibethinus HOM05D002371 ORTHO05D002397 1.1e-22 110.5 80 75.0
TWI56G0517 Tripterygium wilfordii HOM05D002371 ORTHO05D002397 1.1e-22 110.5 68 82.4
GSVIVG01013447001 Vitis vinifera HOM05D002371 ORTHO05D002397 2.5e-22 109.4 68 79.4
CiPaw.07G131200 Carya illinoinensis HOM05D002371 ORTHO05D002397 3.2e-22 109.0 120 59.2
MD06G1001800 Malus domestica HOM05D002371 ORTHO05D002397 4.2e-22 108.6 99 67.7
PGR083G1225 Punica granatum HOM05D002371 ORTHO05D002397 4.2e-22 108.6 99 67.7
RcHm_v2.0_Chr7g0217381 Rosa chinensis HOM05D002371 ORTHO05D002397 5.5e-22 108.2 80 72.5
THA.LOC104813729 Tarenaya hassleriana HOM05D002371 ORTHO05D002397 1.2e-21 107.1 96 64.6
vmacro04430 Vaccinium macrocarpon HOM05D002371 ORTHO05D002397 1.6e-21 106.7 128 55.5
Gohir.D10G194300 Gossypium hirsutum HOM05D002371 ORTHO05D002397 2.8e-21 105.9 91 65.9
MBI14_g09006_MAGBIO Magnolia biondii HOM05D000054 ORTHO05D002397 2.8e-21 105.9 77 71.4
Cc10_g00150 Coffea canephora HOM05D002371 ORTHO05D002397 8.0e-21 104.4 102 63.7
Gorai.011G217400 Gossypium raimondii HOM05D002371 ORTHO05D002397 8.0e-21 104.4 91 64.8
Potri.005G258400 Populus trichocarpa HOM05D002371 ORTHO05D002397 8.0e-21 104.4 68 76.5
Aa31LG4G6660 Aethionema arabicum HOM05D002371 ORTHO05D002397 1.4e-20 103.6 92 63.0
Thhalv10019316m.g Eutrema salsugineum HOM05D002371 ORTHO05D002397 1.4e-20 103.6 118 54.2
DCAR_026374 Daucus carota HOM05D002371 ORTHO05D002397 5.2e-20 101.7 71 76.1
HanXRQChr09g0276321 Helianthus annuus HOM05D002371 ORTHO05D002397 1.2e-19 100.5 83 68.7
Lsat_1_v5_gn_4_95980 Lactuca sativa HOM05D002371 ORTHO05D002397 1.2e-19 100.5 68 77.9
Migut.N02997 Erythranthe guttata HOM05D002371 ORTHO05D002397 2.0e-19 99.8 70 77.1
Sopen04g036550 Solanum pennellii HOM05D002371 ORTHO05D002397 2.6e-19 99.4 103 59.2
C06p50830 Brassica napus HOM05D002371 ORTHO05D002397 3.4e-19 99.0 118 50.0
Carub.0002s2347 Capsella rubella HOM05D002371 ORTHO05D002397 3.4e-19 99.0 78 66.7
A07p42220 Brassica napus HOM05D002371 ORTHO05D002397 4.4e-19 98.6 120 50.8
CDE05G2421 Ceratophyllum demersum HOM05D002371 ORTHO05D002397 4.4e-19 98.6 70 71.4
Gohir.A05G282500 Gossypium hirsutum HOM05D002371 ORTHO05D002397 4.4e-19 98.6 79 70.9
Gohir.D05G283700 Gossypium hirsutum HOM05D002371 ORTHO05D002397 4.4e-19 98.6 79 70.9
Gohir.D05G283850 Gossypium hirsutum HOM05D002371 ORTHO05D002397 4.4e-19 98.6 79 70.9
Gorai.009G298200 Gossypium raimondii HOM05D002371 ORTHO05D002397 4.4e-19 98.6 79 70.9
BolC6t40105H Brassica oleracea HOM05D002371 ORTHO05D002397 5.7e-19 98.2 118 50.0
CARHR070110 Cardamine hirsuta HOM05D002371 ORTHO05D002397 5.7e-19 98.2 107 55.1
CANSAT25G2582 Cannabis sativa HOM05D002371 ORTHO05D002397 7.5e-19 97.8 97 62.9
Sabra05G0200100 Salix brachista HOM05D002371 ORTHO05D002397 7.5e-19 97.8 101 51.5
Gohir.A10G187400 Gossypium hirsutum HOM05D002371 ORTHO05D002397 9.8e-19 97.4 75 70.7
MBI04_g40156_MAGBIO Magnolia biondii HOM05D002371 ORTHO05D002397 9.8e-19 97.4 60 81.7
BcaC08g47231 Brassica carinata HOM05D002371 ORTHO05D002397 1.3e-18 97.1 118 49.2
PGSC0003DMG400009928 Solanum tuberosum HOM05D002371 ORTHO05D002397 1.3e-18 97.1 83 68.7
ECA238G0108 Erigeron canadensis HOM05D002371 ORTHO05D002397 1.7e-18 96.7 80 67.5
BraA07t31751Z Brassica rapa HOM05D002371 ORTHO05D002397 2.2e-18 96.3 118 50.0
AL2G36700 Arabidopsis lyrata HOM05D002371 ORTHO05D002397 6.3e-18 94.7 107 53.3
Lsat_1_v5_gn_2_126481 Lactuca sativa HOM05D002371 ORTHO05D002397 1.4e-17 93.6 76 72.4
AT1G76560 Arabidopsis thaliana HOM05D002371 ORTHO05D002397 1.8e-17 93.2 121 49.6
ECA232G0578 Erigeron canadensis HOM05D002371 ORTHO05D002397 2.4e-17 92.8 67 73.1
Nitab4.5_0009514g0050 Nicotiana tabacum HOM05D002371 ORTHO05D002397 2.4e-17 92.8 67 76.1
SEGI_20456 Sequoiadendron giganteum HOM05D002371 ORTHO05D002397 5.4e-17 91.7 66 69.7
CAN.G1330.26 Capsicum annuum HOM05D002371 ORTHO05D002397 7.0e-17 91.3 65 76.9
PSO017G5852 Papaver somniferum HOM05D002371 ORTHO05D002397 7.0e-17 91.3 130 46.2
PSO170G1655 Papaver somniferum HOM05D002371 ORTHO05D002397 7.0e-17 91.3 130 46.9
Sp5g31720 Schrenkiella parvula HOM05D002371 ORTHO05D002397 9.2e-17 90.9 75 65.3
PSO017G1180 Papaver somniferum HOM05D002371 ORTHO05D002397 1.2e-16 90.5 75 64.0
SalBow6G1854 Salvia bowleyana HOM05D002371 ORTHO05D002397 1.2e-16 90.5 62 77.4
Rhsim07G0258100 Rhododendron simsii HOM05D002371 ORTHO05D002397 7.8e-16 87.8 126 51.6
Ciclev10013778m.g Citrus clementina HOM05D002371 ORTHO05D002397 1.3e-15 87.0 60 80.0
SGA_v2.0_scaffold227G43194 Striga asiatica HOM05D002371 ORTHO05D002397 5.0e-15 85.1 70 67.1
Solyc04g082910.1 Solanum lycopersicum HOM05D002371 ORTHO05D002397 1.6e-13 80.1 85 56.5
Actinidia33601 Actinidia chinensis HOM05D002371 ORTHO05D002397 2.3e-12 76.3 88 59.1
HanXRQChr07g0204821 Helianthus annuus HOM05D002371 ORTHO05D002397 2.3e-12 76.3 51 72.5
HPP92_018899 Vanilla planifolia HOM05D002371 ORTHO05D002397 5.2e-12 75.1 78 55.1
HPP92_018845 Vanilla planifolia HOM05D002371 ORTHO05D002397 1.5e-11 73.6 78 53.8
BcaC08g47168 Brassica carinata HOM05D002371 ORTHO05D002397 3.4e-11 72.4 73 53.4
Peaxi162Scf00064g01413 Petunia axillaris HOM05D002371 ORTHO05D002397 4.4e-11 72.0 71 62.0
Lsat_1_v5_gn_2_127641 Lactuca sativa HOM05D002371 ORTHO05D002397 6.4e-10 68.2 65 64.6
MBI17_g42227_MAGBIO Magnolia biondii HOM05D002371 ORTHO05D002397 1.8e-09 66.6 47 68.1
MBI17_g47233_MAGBIO Magnolia biondii HOM05D002371 ORTHO05D002397 1.8e-09 66.6 47 68.1
AUR62035187 Chenopodium quinoa HOM05D002371 ORTHO05D002397 1.2e-08 63.9 53 62.3
AUR62041342 Chenopodium quinoa HOM05D002371 ORTHO05D002397 1.2e-08 63.9 53 62.3
MBI12_g37476_MAGBIO Magnolia biondii HOM05D004660 ORTHO05D005474 7.8e-08 61.2 63 55.6
MBI12_g14584_MAGBIO Magnolia biondii HOM05D002371 ORTHO05D002397 2.3e-07 59.7 63 54.0
ATR0796G029 Amborella trichopoda HOM05D002371 ORTHO05D002397 3.0e-07 59.3 81 40.7
TAR636G1360 Trochodendron aralioides HOM05D002371 ORTHO05D002397 6.6e-07 58.2 56 50.0
PSO761G0571 Papaver somniferum HOM05D002371 ORTHO05D002397 1.5e-06 57.0 128 37.5
Ca_09211_v3 Cicer arietinum L. HOM05D002371 ORTHO05D002397 3.3e-06 55.8 66 43.9
Sabra14G0089500 Salix brachista HOM05D002371 ORTHO05D002397 3.3e-06 55.8 57 43.9
SEGI_13734 Sequoiadendron giganteum HOM05D002371 ORTHO05D002397 3.3e-06 55.8 59 47.5
Atru.chr5.1000 Acer truncatum HOM05D002371 ORTHO05D002397 7.3e-06 54.7 55 47.3
Potri.014G120700 Populus trichocarpa HOM05D002371 ORTHO05D002397 9.5e-06 54.3 55 47.3


User provided reference genes

Program Settings