Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41624 Davidia involucrata HOM05D005514 ORTHO05D006563 1.9e-184 649.0 330 100.0
Dinv36656 Davidia involucrata HOM05D005514 ORTHO05D006563 1.2e-135 486.9 320 78.4
QL02p045925 Quercus lobata HOM05D005514 ORTHO05D006563 1.5e-125 453.4 324 75.0
Hma1.2p1_1151F.1_g261950 Hydrangea macrophylla HOM05D005514 ORTHO05D006563 3.5e-122 442.2 308 72.1
Thecc.09G107100 Theobroma cacao HOM05D005514 ORTHO05D006563 1.3e-121 440.3 308 73.4
Duzib168G0165 Durio zibethinus HOM05D005514 ORTHO05D006563 3.8e-116 422.2 309 68.0
CiPaw.03G229100 Carya illinoinensis HOM05D005514 ORTHO05D006563 1.9e-115 419.9 308 72.1
Cfa003235 Carpinus fangiana HOM05D005514 ORTHO05D006563 2.4e-115 419.5 329 71.7
CSS0000167 Camellia sinensis var. sinensis HOM05D005514 ORTHO05D006563 8.7e-113 411.0 319 70.2
Manes.03G023100 Manihot esculenta HOM05D005514 ORTHO05D006563 8.1e-111 404.4 304 71.4
CiPaw.04G162600 Carya illinoinensis HOM05D005514 ORTHO05D006563 1.8e-110 403.3 311 66.6
Sabra06G0124000 Salix brachista HOM05D005514 ORTHO05D006563 4.9e-108 395.2 307 66.4
CANSAT02G0006 Cannabis sativa HOM05D005514 ORTHO05D006563 1.0e-105 387.5 308 65.6
Actinidia32673 Actinidia chinensis HOM05D005514 ORTHO05D006563 1.3e-105 387.1 295 70.5
vmacro06229 Vaccinium macrocarpon HOM05D005514 ORTHO05D006563 3.9e-105 385.6 318 65.7
Cc06_g09930 Coffea canephora HOM05D005514 ORTHO05D006563 3.3e-104 382.5 301 65.8
RcHm_v2.0_Chr2g0089981 Rosa chinensis HOM05D005514 ORTHO05D006563 1.6e-103 380.2 308 67.5
Gohir.D08G262600 Gossypium hirsutum HOM05D005514 ORTHO05D006563 2.1e-103 379.8 311 65.3
MD02G1042900 Malus domestica HOM05D005514 ORTHO05D006563 4.8e-103 378.6 311 65.0
Oeu002248.1 Olea europaea HOM05D005514 ORTHO05D006563 2.4e-102 376.3 302 66.2
Gohir.A08G241800 Gossypium hirsutum HOM05D005514 ORTHO05D006563 9.0e-102 374.4 311 67.8
AUR62010955 Chenopodium quinoa HOM05D005514 ORTHO05D006563 1.5e-101 373.6 313 63.6
Prupe.7G234000 Prunus persica HOM05D005514 ORTHO05D006563 5.8e-101 371.7 305 66.2
Gorai.004G280600 Gossypium raimondii HOM05D005514 ORTHO05D006563 7.6e-101 371.3 311 67.5
Duzib150G0489 Durio zibethinus HOM05D005514 ORTHO05D006563 2.9e-100 369.4 309 64.7
Atru.chr7.1371 Acer truncatum HOM05D005514 ORTHO05D006563 3.2e-99 365.9 325 63.1
Nitab4.5_0000952g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 2.1e-98 363.2 301 62.5
Glyma.09G192400 Glycine max HOM05D005514 ORTHO05D006563 3.5e-98 362.5 308 64.9
Nitab4.5_0000010g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 6.0e-98 361.7 297 63.0
Actinidia07405 Actinidia chinensis HOM05D005514 ORTHO05D006563 3.9e-97 359.0 311 64.6
FAN26G2817 Fragaria x ananassa HOM05D005514 ORTHO05D006563 5.1e-97 358.6 307 65.1
Ciclev10008655m.g Citrus clementina HOM05D005514 ORTHO05D006563 6.7e-97 358.2 325 61.2
FvH4_1g04330 Fragaria vesca HOM05D005514 ORTHO05D006563 1.1e-96 357.5 307 65.5
Phvul.004G165700 Phaseolus vulgaris HOM05D005514 ORTHO05D006563 1.9e-96 356.7 308 64.0
CAN.G148.5 Capsicum annuum HOM05D005514 ORTHO05D006563 4.3e-96 355.5 300 61.7
Glyma.07G084500 Glycine max HOM05D005514 ORTHO05D006563 4.8e-95 352.1 311 63.3
VMungo0464G0467 Vigna mungo HOM05D005514 ORTHO05D006563 4.8e-95 352.1 308 65.6
Eucgr.C01267 Eucalyptus grandis HOM05D005514 ORTHO05D006563 3.1e-94 349.4 309 59.5
FAN19G0406 Fragaria x ananassa HOM05D005514 ORTHO05D006563 4.0e-94 349.0 307 64.8
FAN23G0542 Fragaria x ananassa HOM05D005514 ORTHO05D006563 4.0e-94 349.0 335 61.5
Lalb_Chr24g0397401 Lupinus albus HOM05D005514 ORTHO05D006563 6.9e-94 348.2 314 60.5
arahy.Tifrunner.gnm1.ann1.LW2ZPS Arachis hypogaea HOM05D005514 ORTHO05D006563 2.0e-93 346.7 312 60.9
Peaxi162Scf00031g00232 Petunia axillaris HOM05D005514 ORTHO05D006563 1.3e-92 344.0 298 60.1
arahy.Tifrunner.gnm1.ann1.7WD3SA Arachis hypogaea HOM05D005514 ORTHO05D006563 2.5e-91 339.7 308 60.7
Hund09218 Selenicereus undatus HOM05D005514 ORTHO05D006563 2.5e-91 339.7 311 60.8
EL10Ac8g18440 Beta vulgaris HOM05D005514 ORTHO05D006563 2.7e-90 336.3 315 58.7
Ca_25539_v3 Cicer arietinum L. HOM05D005514 ORTHO05D006563 6.7e-89 331.6 319 58.3
Lalb_Chr22g0352701 Lupinus albus HOM05D005514 ORTHO05D006563 8.7e-89 331.3 310 62.6
TAR383G0343 Trochodendron aralioides HOM05D001777 ORTHO05D001809 8.7e-89 331.3 298 60.7
MD15G1181700 Malus domestica HOM05D005514 ORTHO05D006563 5.7e-88 328.6 312 60.9
PGSC0003DMG400027426 Solanum tuberosum HOM05D005514 ORTHO05D006563 5.7e-88 328.6 296 60.5
Potri.006G160500 Populus trichocarpa HOM05D005514 ORTHO05D006563 1.8e-86 323.6 307 59.3
CsaV3_1G045730 Cucumis sativus L. HOM05D005514 ORTHO05D006563 5.3e-86 322.0 324 56.2
MELO3C024688.2 Cucumis melo HOM05D005514 ORTHO05D006563 6.9e-86 321.6 324 56.2
Solyc05g018340.4 Solanum lycopersicum HOM05D005514 ORTHO05D006563 6.9e-86 321.6 295 60.0
Sopen05g015140 Solanum pennellii HOM05D005514 ORTHO05D006563 6.9e-86 321.6 295 60.0
ClCG06G008760 Citrullus lanatus HOM05D005514 ORTHO05D006563 2.0e-85 320.1 324 56.2
Lj2g0026530 Lotus japonicus HOM05D005514 ORTHO05D006563 8.5e-84 314.7 359 57.1
Haze_25771 Corylus avellana HOM05D005514 ORTHO05D006563 7.9e-82 308.1 237 73.0
Medtr6g087890 Medicago truncatula HOM05D005514 ORTHO05D006563 5.1e-81 305.4 317 57.4
Potri.018G083100 Populus trichocarpa HOM05D005514 ORTHO05D006563 5.1e-81 305.4 325 55.4
COL.COLO4_34823 Corchorus olitorius HOM05D005514 ORTHO05D006563 2.0e-80 303.5 325 52.6
Lalb_Chr14g0371621 Lupinus albus HOM05D005514 ORTHO05D006563 2.0e-80 303.5 328 54.9
TAR624G0612 Trochodendron aralioides HOM05D005514 ORTHO05D006563 3.3e-80 302.8 278 56.8
Oeu064593.1 Olea europaea HOM05D005514 ORTHO05D006563 1.3e-79 300.8 333 55.6
Ah.07g205470 Amaranthus hybridus HOM05D005514 ORTHO05D006563 1.7e-79 300.4 317 56.5
AUR62021464 Chenopodium quinoa HOM05D005514 ORTHO05D006563 1.1e-78 297.7 319 55.2
Psat1g044240 Pisum sativum HOM05D005514 ORTHO05D006563 1.1e-78 297.7 331 56.5
DCAR_028696 Daucus carota HOM05D005514 ORTHO05D006563 3.4e-77 292.7 348 51.7
Nn2g11677 Nelumbo nucifera HOM05D005514 ORTHO05D006563 5.9e-77 292.0 316 55.1
MSTRG.10624 Avicennia marina HOM05D005514 ORTHO05D006563 1.0e-76 291.2 294 55.4
Sc18g0001310 Simmondsia chinensis HOM05D005514 ORTHO05D006563 1.0e-76 291.2 315 59.7
TWI23G1143 Tripterygium wilfordii HOM05D005514 ORTHO05D006563 2.5e-75 286.6 289 54.3
Sed0026603 Sechium edule HOM05D005514 ORTHO05D006563 5.1e-73 278.9 384 44.3
TPR.G10049 Trifolium pratense HOM05D005514 ORTHO05D006563 6.7e-73 278.5 358 48.3
Cpa.g.sc23.79 Carica papaya HOM05D005514 ORTHO05D006563 8.8e-73 278.1 251 59.0
HanXRQChr10g0318661 Helianthus annuus HOM05D005514 ORTHO05D006563 1.1e-72 277.7 329 53.2
Sed0015833 Sechium edule HOM05D005514 ORTHO05D006563 3.3e-72 276.2 320 51.6
PSO782G4531 Papaver somniferum HOM05D005514 ORTHO05D006563 3.7e-71 272.7 347 50.7
ECA234G0189 Erigeron canadensis HOM05D005514 ORTHO05D006563 5.9e-69 265.4 328 50.6
MSTRG.26360 Avicennia marina HOM05D005514 ORTHO05D006563 5.5e-67 258.8 305 49.2
PSO566G0157 Papaver somniferum HOM05D005514 ORTHO05D006563 1.2e-66 257.7 338 51.5
GSVIVG01015362001 Vitis vinifera HOM05D005514 ORTHO05D006563 3.9e-65 252.7 175 75.4
MBI04_g19180_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 1.7e-63 247.3 314 48.1
MBI14_g08031_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 8.2e-63 245.0 305 48.2
Aqoxy7G01583 Aquilegia oxysepala HOM05D005514 ORTHO05D006563 3.1e-62 243.0 275 53.8
PGR142G2557 Punica granatum HOM05D005514 ORTHO05D006563 5.3e-62 242.3 309 49.8
Rhsim03G0240000 Rhododendron simsii HOM05D005514 ORTHO05D006563 1.6e-58 230.7 226 60.2
THA.LOC104804022 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 4.4e-56 222.6 313 50.2
Sabra18G0070900 Salix brachista HOM05D005514 ORTHO05D006563 9.1e-54 214.9 198 55.1
SEGI_01979 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 8.5e-52 208.4 299 46.5
THA.LOC104820053 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 4.2e-51 206.1 320 45.3
Lj7A655G38 Lonicera japonica HOM05D005514 ORTHO05D006563 5.5e-51 205.7 237 52.3
ATR0315G038 Amborella trichopoda HOM05D005514 ORTHO05D006563 2.6e-48 196.8 344 43.9
CDE05G1480 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 1.1e-46 191.4 287 48.4
Aa31LG8G17060 Aethionema arabicum HOM05D005514 ORTHO05D006563 1.4e-46 191.0 337 42.1
Migut.K00501 Erythranthe guttata HOM05D005514 ORTHO05D006563 5.4e-46 189.1 295 49.5
Sp7g26930 Schrenkiella parvula HOM05D005514 ORTHO05D006563 1.3e-44 184.5 322 45.0
CARHR236720 Cardamine hirsuta HOM05D005514 ORTHO05D006563 6.6e-44 182.2 336 44.3
Thhalv10025603m.g Eutrema salsugineum HOM05D005514 ORTHO05D006563 6.6e-44 182.2 331 42.3
AL7G23470 Arabidopsis lyrata HOM05D005514 ORTHO05D006563 1.1e-43 181.4 330 41.8
AT4G28990 Arabidopsis thaliana HOM05D005514 ORTHO05D006563 2.1e-42 177.2 332 41.9
Carub.0007s1165 Capsella rubella HOM05D005514 ORTHO05D006563 1.4e-41 174.5 342 41.2
Lsat_1_v5_gn_5_102941 Lactuca sativa HOM05D005514 ORTHO05D006563 1.4e-38 164.5 245 47.8
BcaNung00443 Brassica carinata HOM05D005514 ORTHO05D006563 4.1e-38 162.9 323 42.4
BolC1t01016H Brassica oleracea HOM05D001777 ORTHO05D006510 4.6e-37 159.5 318 41.5
BcaNung01339 Brassica carinata HOM05D005514 ORTHO05D006563 5.9e-37 159.1 325 42.8
Nn3g18098 Nelumbo nucifera HOM05D005514 ORTHO05D006563 1.0e-36 158.3 116 65.5
CDE05G2615 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 1.5e-35 154.5 300 42.3
A01p08990 Brassica napus HOM05D001777 ORTHO05D006510 7.3e-35 152.1 306 42.2
Zm00001eb147430 Zea mays HOM05D005514 ORTHO05D006563 9.5e-35 151.8 325 36.9
C01p10530 Brassica napus HOM05D001777 ORTHO05D006510 2.8e-34 150.2 318 40.3
BraA03t14917Z Brassica rapa HOM05D005514 ORTHO05D006563 1.8e-33 147.5 300 40.7
Os06g0332900 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 1.8e-33 147.5 325 37.8
BcaNung00440 Brassica carinata HOM05D005514 ORTHO05D006563 2.6e-32 143.7 347 38.3
BcaC09g51675 Brassica carinata HOM05D005514 ORTHO05D006563 1.2e-29 134.8 315 38.1
BcaNung02893 Brassica carinata HOM05D005514 ORTHO05D006563 2.3e-28 130.6 315 37.8
C07p56560 Brassica napus HOM05D005514 ORTHO05D006563 2.3e-28 130.6 315 37.8
BolC7t46134H Brassica oleracea HOM05D005514 ORTHO05D006563 5.6e-27 125.9 309 38.2
Os02g0274700 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 1.2e-24 118.2 287 37.3
Pp3c14_23580 Physcomitrium patens HOM05D005514 ORTHO05D006563 7.5e-24 115.5 331 34.1
Mapoly0001s0121 Marchantia polymorpha HOM05D005514 ORTHO05D006563 2.9e-23 113.6 326 35.0
HPP92_000517 Vanilla planifolia HOM05D005514 ORTHO05D006563 3.5e-21 106.7 296 35.8
SEGI_18875 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 2.5e-19 100.5 332 34.9
SGA_v2.0_scaffold92G28280 Striga asiatica HOM05D005514 ORTHO05D006563 4.4e-16 89.7 316 33.2
AagrBONN_evm.TU.Sc2ySwM_344.197 Anthoceros agrestis HOM05D005514 ORTHO05D006563 2.9e-15 87.0 166 42.2
unitig_0.g2554 Utricularia gibba HOM05D005514 ORTHO05D006563 1.4e-14 84.7 152 39.5
SMO169G0168 Selaginella moellendorffii HOM05D005514 ORTHO05D006563 1.9e-11 74.3 169 38.5
CBR_g44542 Chara braunii HOM05D005514 ORTHO05D006563 7.3e-11 72.4 237 33.8
SMO116G0230 Selaginella moellendorffii HOM05D005514 ORTHO05D006563 6.8e-09 65.9 37 73.0
Sabra09G0058400 Salix brachista HOM05D002034 ORTHO05D006399 1.1e-06 58.5 43 58.1
Potri.009G076600 Populus trichocarpa HOM05D002034 ORTHO05D006399 1.4e-06 58.2 40 60.0
Nn2g13237 Nelumbo nucifera HOM05D002034 ORTHO05D006399 4.2e-06 56.6 26 80.8
Migut.N00767 Erythranthe guttata HOM05D002034 ORTHO05D006399 5.4e-06 56.2 26 80.8
Nn1g04222 Nelumbo nucifera HOM05D002034 ORTHO05D006399 7.1e-06 55.8 40 57.5
Dinv09661 Davidia involucrata HOM05D002034 ORTHO05D006399 9.3e-06 55.5 26 80.8
Duzib170G0382 Durio zibethinus HOM05D002034 ORTHO05D006399 9.3e-06 55.5 26 76.9
Gohir.A03G026200 Gossypium hirsutum HOM05D002034 ORTHO05D006399 9.3e-06 55.5 26 76.9
Gohir.D03G142100 Gossypium hirsutum HOM05D002034 ORTHO05D006399 9.3e-06 55.5 26 76.9
Gohir.D03G142300 Gossypium hirsutum HOM05D002034 ORTHO05D006399 9.3e-06 55.5 26 76.9
Gorai.003G149100 Gossypium raimondii HOM05D002034 ORTHO05D006399 9.3e-06 55.5 26 76.9
Gorai.003G149400 Gossypium raimondii HOM05D002034 ORTHO05D006399 9.3e-06 55.5 26 76.9
Manes.02G216300 Manihot esculenta HOM05D002034 ORTHO05D006399 9.3e-06 55.5 26 76.9
Manes.18G141005 Manihot esculenta HOM05D002034 ORTHO05D006399 9.3e-06 55.5 26 76.9


User provided reference genes

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